RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 UNCXA6NJT0 531 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 WDR47O94967 919 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 TNNC2P02585 160 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 PDIA5Q14554 519 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 LONRF1Q17RB8 773 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 KRT24Q2M2I5 525 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 ZCCHC7Q8N3Z6 543 aaKnown RBP5.31□□□□□ -1.56
SKP1-202ENST00000353411 MINDY2Q8NBR6 621 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 SYN2Q92777 582 aaPredicted RBP5.31□□□□□ -1.56
SKP1-202ENST00000353411 WDR12Q9GZL7 423 aaKnown RBP5.31□□□□□ -1.56
SKP1-202ENST00000353411 ABCF3Q9NUQ8 709 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 MBD2Q9UBB5 411 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 TBX22Q9Y458 520 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 DIP2AQ14689 1571 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 GFPT2O94808 682 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 ITGA2BP08514 1039 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 PLCG2P16885 1265 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 EPHB2P29323 1055 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 CASP5P51878 434 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 MTFR1Q15390 333 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 ZNF618Q5T7W0 954 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 MAEAQ7L5Y9 396 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 G2E3Q7L622 706 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 ZNF555Q8NEP9 628 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 RBM17Q96I25 401 aaKnown RBP5.31□□□□□ -1.56
SKP1-202ENST00000353411 B3GALT6Q96L58 329 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 ECSITQ9BQ95 431 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 LRMDAQ9H2I8 198 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 STARD13Q9Y3M8 1113 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 TMEM247A6NEH6 219 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 TRMUO75648 421 aaKnown RBP5.31□□□□□ -1.56
SKP1-202ENST00000353411 RECQLP46063 649 aaPredicted RBP5.31□□□□□ -1.56
SKP1-202ENST00000353411 CPSF1Q10570 1443 aaKnown RBP5.31□□□□□ -1.56
SKP1-202ENST00000353411 HADHQ16836 314 aaKnown RBP5.31□□□□□ -1.56
SKP1-202ENST00000353411 SLC45A4Q5BKX6 768 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 DYMQ7RTS9 669 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 WAPLQ7Z5K2 1190 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 LUZP2Q86TE4 346 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 DDX42Q86XP3 938 aaKnown RBP eCLIP5.31□□□□□ -1.56
SKP1-202ENST00000353411 TCAIMQ8N3R3 496 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 GALNT4Q8N4A0 578 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 ZNF398Q8TD17 642 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 ASAP3Q8TDY4 903 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 GDPD5Q8WTR4 605 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 NUDT16Q96DE0 195 aaKnown RBP5.31□□□□□ -1.56
SKP1-202ENST00000353411 GRIP2Q9C0E4 1043 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 CCDC90BQ9GZT6 254 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 ZCWPW1Q9H0M4 648 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 NOL6Q9H6R4 1146 aaKnown RBP5.31□□□□□ -1.56
SKP1-202ENST00000353411 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.31□□□□□ -1.562e-6■■■□□ 18.4
SKP1-202ENST00000353411 PDS5AQ29RF7 1337 aaKnown RBP5.31□□□□□ -1.56
SKP1-202ENST00000353411 WDR17Q8IZU2 1322 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 RARGP13631 454 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 ALDH18A1P54886 795 aaKnown RBP5.31□□□□□ -1.56
SKP1-202ENST00000353411 NCKAP1LP55160 1127 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 RASA3Q14644 834 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 OR6Y1Q8NGX8 325 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 ADA2Q9NZK5 511 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 HACD3Q9P035 362 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 TRIM10Q9UDY6 481 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 TAGLN3Q9UI15 199 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 USTQ9Y2C2 406 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 KLHL20Q9Y2M5 609 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 DIP2BQ9P265 1576 aa5.31□□□□□ -1.56
SKP1-202ENST00000353411 NOTOA8MTQ0 251 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 KPNA7A9QM74 516 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 WBP4O75554 376 aaKnown RBP5.3□□□□□ -1.56
SKP1-202ENST00000353411 HSPA4LO95757 839 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 NAA20P61599 178 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 ITGADQ13349 1161 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 NCAPHQ15003 741 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 ZC3H12AQ5D1E8 599 aaKnown RBP5.3□□□□□ -1.56
SKP1-202ENST00000353411 LDHAL6AQ6ZMR3 332 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 APOL4Q9BPW4 351 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 ADNPQ9H2P0 1102 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 STX8Q9UNK0 236 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 UMODL1Q5DID0 1318 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 TBC1D4O60343 1298 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 OR52Z1P0C646 297 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 MAPK4P31152 587 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 PRAMEP78395 509 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 DNAJC3Q13217 504 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 PPP2R5CQ13362 524 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 PDK3Q15120 406 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 SHC4Q6S5L8 630 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 RHOBTB2Q9BYZ6 727 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 ADAM22Q9P0K1 906 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 SUGT1Q9Y2Z0 365 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 PNMA8CA0A1B0GUJ8 204 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 PFDN6O15212 129 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 USP11P51784 963 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 FAM26FQ5R3K3 315 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 PRR23BQ6ZRT6 265 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 FANCBQ8NB91 859 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 BEST2Q8NFU1 509 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 RFFLQ8WZ73 363 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 ACAP3Q96P50 834 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 TMEM237Q96Q45 408 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 TRNAU1APQ9NX07 287 aaKnown RBP5.3□□□□□ -1.56
SKP1-202ENST00000353411 TTC7AQ9ULT0 858 aaPredicted RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms