RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 KLHL5Q96PQ7 755 aa30.23■■■□□ 2.43
ATPAF1-201ENST00000329231 PPP1R10Q96QC0 940 aaKnown RBP30.23■■■□□ 2.43
ATPAF1-201ENST00000329231 PAAF1Q9BRP4 392 aa30.23■■■□□ 2.43
ATPAF1-201ENST00000329231 PANK2Q9BZ23 570 aa30.23■■■□□ 2.43
ATPAF1-201ENST00000329231 CACNG4Q9UBN1 327 aa30.23■■■□□ 2.43
ATPAF1-201ENST00000329231 C2CD2LO14523 706 aa30.22■■■□□ 2.43
ATPAF1-201ENST00000329231 CNPP09543 421 aaKnown RBP30.22■■■□□ 2.43
ATPAF1-201ENST00000329231 KLRC2P26717 231 aa30.22■■■□□ 2.43
ATPAF1-201ENST00000329231 MATR3P43243 847 aaKnown RBP eCLIP30.22■■■□□ 2.43
ATPAF1-201ENST00000329231 DSG1Q02413 1049 aa30.22■■■□□ 2.43
ATPAF1-201ENST00000329231 MCL1Q07820 350 aa30.22■■■□□ 2.43
ATPAF1-201ENST00000329231 PKP1Q13835 747 aa30.22■■■□□ 2.43
ATPAF1-201ENST00000329231 USP41Q3LFD5 358 aa30.22■■■□□ 2.43
ATPAF1-201ENST00000329231 FOXD4L6Q3SYB3 417 aaPredicted RBP30.22■■■□□ 2.43
ATPAF1-201ENST00000329231 XKR4Q5GH76 650 aa30.22■■■□□ 2.43
ATPAF1-201ENST00000329231 GLRA4Q5JXX5 417 aa30.22■■■□□ 2.43
ATPAF1-201ENST00000329231 SYCE2Q6PIF2 218 aa30.22■■■□□ 2.43
ATPAF1-201ENST00000329231 ALKAL1Q6UXT8 129 aa30.22■■■□□ 2.43
ATPAF1-201ENST00000329231 FOXD4L3Q6VB84 417 aaPredicted RBP30.22■■■□□ 2.43
ATPAF1-201ENST00000329231 DYMQ7RTS9 669 aa30.22■■■□□ 2.43
ATPAF1-201ENST00000329231 DDX12PQ92771 950 aa30.22■■■□□ 2.43
ATPAF1-201ENST00000329231 GPR62Q9BZJ7 368 aa30.22■■■□□ 2.43
ATPAF1-201ENST00000329231 S1PR5Q9H228 398 aa30.22■■■□□ 2.43
ATPAF1-201ENST00000329231 CD320Q9NPF0 282 aa30.22■■■□□ 2.43
ATPAF1-201ENST00000329231 DZANK1Q9NVP4 752 aa30.22■■■□□ 2.43
ATPAF1-201ENST00000329231 SF3B1O75533 1304 aaKnown RBP eCLIP30.22■■■□□ 2.434e-6■■■■■ 120.3
ATPAF1-201ENST00000329231 MUC3AQ02505 3323 aa30.21■■■□□ 2.43
ATPAF1-201ENST00000329231 SMIM28A0A1B0GU29 152 aa30.21■■■□□ 2.43
ATPAF1-201ENST00000329231 CUTAO60888 179 aa30.21■■■□□ 2.43
ATPAF1-201ENST00000329231 LIG4P49917 911 aa30.21■■■□□ 2.43
ATPAF1-201ENST00000329231 KIAA0319Q5VV43 1072 aa30.21■■■□□ 2.43
ATPAF1-201ENST00000329231 GPR65Q8IYL9 337 aa30.21■■■□□ 2.43
ATPAF1-201ENST00000329231 KCNG4Q8TDN1 519 aa30.21■■■□□ 2.43
ATPAF1-201ENST00000329231 SLC22A17Q8WUG5 538 aa30.21■■■□□ 2.43
ATPAF1-201ENST00000329231 CHST7Q9NS84 486 aa30.21■■■□□ 2.43
ATPAF1-201ENST00000329231 MYH15Q9Y2K3 1946 aa30.21■■■□□ 2.43
ATPAF1-201ENST00000329231 HNRNPDLO14979 420 aaKnown RBP30.2■■■□□ 2.43
ATPAF1-201ENST00000329231 SUSD6Q92537 303 aa30.2■■■□□ 2.43
ATPAF1-201ENST00000329231 SNX27Q96L92 541 aa30.2■■■□□ 2.43
ATPAF1-201ENST00000329231 UROC1Q96N76 676 aa30.2■■■□□ 2.43
ATPAF1-201ENST00000329231 FIZ1Q96SL8 496 aa30.2■■■□□ 2.43
ATPAF1-201ENST00000329231 SLC38A7Q9NVC3 462 aa30.2■■■□□ 2.43
ATPAF1-201ENST00000329231 CFAP45Q9UL16 551 aa30.2■■■□□ 2.43
ATPAF1-201ENST00000329231 A0A087X0B3 334 aa30.19■■■□□ 2.42
ATPAF1-201ENST00000329231 MYMKA6NI61 221 aa30.19■■■□□ 2.42
ATPAF1-201ENST00000329231 C19orf67A6NJJ6 358 aa30.19■■■□□ 2.42
ATPAF1-201ENST00000329231 KIF4AO95239 1232 aa30.19■■■□□ 2.42
ATPAF1-201ENST00000329231 PIGRP01833 764 aa30.19■■■□□ 2.42
ATPAF1-201ENST00000329231 EPCAMP16422 314 aa30.19■■■□□ 2.42
ATPAF1-201ENST00000329231 NMT1P30419 496 aaKnown RBP30.19■■■□□ 2.42
ATPAF1-201ENST00000329231 GTF2BQ00403 316 aa30.19■■■□□ 2.42
ATPAF1-201ENST00000329231 ELAVL2Q12926 359 aaKnown RBP30.19■■■□□ 2.42
ATPAF1-201ENST00000329231 BECN1Q14457 450 aa30.19■■■□□ 2.42
ATPAF1-201ENST00000329231 PDILTQ8N807 584 aa30.19■■■□□ 2.42
ATPAF1-201ENST00000329231 HASPINQ8TF76 798 aa30.19■■■□□ 2.42
ATPAF1-201ENST00000329231 APOL5Q9BWW9 433 aa30.19■■■□□ 2.42
ATPAF1-201ENST00000329231 ST6GALNAC4Q9H4F1 302 aa30.19■■■□□ 2.42
ATPAF1-201ENST00000329231 RXFP1Q9HBX9 757 aa30.19■■■□□ 2.42
ATPAF1-201ENST00000329231 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP30.19■■■□□ 2.42
ATPAF1-201ENST00000329231 SEL1LQ9UBV2 794 aa30.19■■■□□ 2.42
ATPAF1-201ENST00000329231 ADH1AP07327 375 aa30.18■■■□□ 2.42
ATPAF1-201ENST00000329231 KCNE1P15382 129 aa30.18■■■□□ 2.42
ATPAF1-201ENST00000329231 GAP43P17677 238 aa30.18■■■□□ 2.42
ATPAF1-201ENST00000329231 CLCN4P51793 760 aa30.18■■■□□ 2.42
ATPAF1-201ENST00000329231 ITIH3Q06033 890 aa30.18■■■□□ 2.42
ATPAF1-201ENST00000329231 CES5AQ6NT32 575 aa30.18■■■□□ 2.42
ATPAF1-201ENST00000329231 CNTN3Q9P232 1028 aa30.18■■■□□ 2.42
ATPAF1-201ENST00000329231 CREMQ03060 361 aa30.17■■■□□ 2.42
ATPAF1-201ENST00000329231 KYAT1Q16773 422 aa30.17■■■□□ 2.42
ATPAF1-201ENST00000329231 DCLRE1AQ6PJP8 1040 aa30.17■■■□□ 2.42
ATPAF1-201ENST00000329231 SFR1Q86XK3 245 aa30.17■■■□□ 2.42
ATPAF1-201ENST00000329231 MAP4K3Q8IVH8 894 aa30.17■■■□□ 2.42
ATPAF1-201ENST00000329231 DNAJC19Q96DA6 116 aa30.17■■■□□ 2.42
ATPAF1-201ENST00000329231 B3GALT6Q96L58 329 aa30.17■■■□□ 2.42
ATPAF1-201ENST00000329231 ADAM7Q9H2U9 754 aa30.17■■■□□ 2.42
ATPAF1-201ENST00000329231 TMEM189-UBE2V1I3L0A0 370 aa30.16■■■□□ 2.42
ATPAF1-201ENST00000329231 TEX28O15482 410 aa30.16■■■□□ 2.42
ATPAF1-201ENST00000329231 CLTAP09496 248 aa30.16■■■□□ 2.42
ATPAF1-201ENST00000329231 CBX2Q14781 532 aaPredicted RBP30.16■■■□□ 2.42
ATPAF1-201ENST00000329231 ZNF720Q7Z2F6 126 aa30.16■■■□□ 2.42
ATPAF1-201ENST00000329231 RIN2Q8WYP3 895 aaPredicted RBP30.16■■■□□ 2.42
ATPAF1-201ENST00000329231 DDX27Q96GQ7 796 aaKnown RBP30.16■■■□□ 2.42
ATPAF1-201ENST00000329231 FBXL18Q96ME1 805 aa30.16■■■□□ 2.42
ATPAF1-201ENST00000329231 PHF7Q9BWX1 381 aaPredicted RBP30.16■■■□□ 2.42
ATPAF1-201ENST00000329231 HAPLN2Q9GZV7 340 aa30.16■■■□□ 2.42
ATPAF1-201ENST00000329231 CUEDC2Q9H467 287 aa30.16■■■□□ 2.42
ATPAF1-201ENST00000329231 BDP1A6H8Y1 2624 aa30.15■■■□□ 2.42
ATPAF1-201ENST00000329231 B3GAT3O94766 335 aa30.15■■■□□ 2.42
ATPAF1-201ENST00000329231 ME1P48163 572 aa30.15■■■□□ 2.42
ATPAF1-201ENST00000329231 CLCNKBP51801 687 aa30.15■■■□□ 2.42
ATPAF1-201ENST00000329231 UPP1Q16831 310 aa30.15■■■□□ 2.42
ATPAF1-201ENST00000329231 SLC10A6Q3KNW5 377 aa30.15■■■□□ 2.42
ATPAF1-201ENST00000329231 SEZ6Q53EL9 994 aa30.15■■■□□ 2.42
ATPAF1-201ENST00000329231 AXDND1Q5T1B0 1012 aaPredicted RBP30.15■■■□□ 2.42
ATPAF1-201ENST00000329231 FAM171A1Q5VUB5 890 aa30.15■■■□□ 2.42
ATPAF1-201ENST00000329231 HVCN1Q96D96 273 aa30.15■■■□□ 2.42
ATPAF1-201ENST00000329231 ZMAT2Q96NC0 199 aaKnown RBP30.15■■■□□ 2.42
ATPAF1-201ENST00000329231 TTPALQ9BTX7 342 aa30.15■■■□□ 2.42
ATPAF1-201ENST00000329231 LRRC27Q9C0I9 530 aa30.15■■■□□ 2.42
ATPAF1-201ENST00000329231 MRPL44Q9H9J2 332 aaKnown RBP30.15■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms