RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 KCNN4O15554 427 aa18.28■□□□□ 0.52
SHANK1-201ENST00000293441 ASAP2O43150 1006 aa18.28■□□□□ 0.52
SHANK1-201ENST00000293441 E2F6O75461 281 aa18.28■□□□□ 0.52
SHANK1-201ENST00000293441 EFCAB12Q6NXP0 572 aa18.28■□□□□ 0.52
SHANK1-201ENST00000293441 LRRC71Q8N4P6 559 aa18.28■□□□□ 0.52
SHANK1-201ENST00000293441 LZICQ8WZA0 190 aa18.28■□□□□ 0.52
SHANK1-201ENST00000293441 PPP2R3CQ969Q6 453 aa18.28■□□□□ 0.52
SHANK1-201ENST00000293441 DEFB129Q9H1M3 183 aa18.28■□□□□ 0.52
SHANK1-201ENST00000293441 MYBP10242 640 aa18.28■□□□□ 0.52
SHANK1-201ENST00000293441 ARSEP51690 589 aa18.28■□□□□ 0.52
SHANK1-201ENST00000293441 VCPP55072 806 aaKnown RBP18.28■□□□□ 0.52
SHANK1-201ENST00000293441 PGBD3Q8N328 593 aa18.28■□□□□ 0.52
SHANK1-201ENST00000293441 TRIM54Q9BYV2 358 aa18.28■□□□□ 0.52
SHANK1-201ENST00000293441 CASS4Q9NQ75 786 aa18.28■□□□□ 0.52
SHANK1-201ENST00000293441 THEGQ9P2T0 379 aa18.28■□□□□ 0.52
SHANK1-201ENST00000293441 SYF2O95926 243 aaKnown RBP18.28■□□□□ 0.52
SHANK1-201ENST00000293441 NCOA4Q13772 614 aa18.28■□□□□ 0.52
SHANK1-201ENST00000293441 FASTKD1Q53R41 847 aaKnown RBP18.28■□□□□ 0.52
SHANK1-201ENST00000293441 C18orf8Q96DM3 657 aa18.28■□□□□ 0.52
SHANK1-201ENST00000293441 DCUN1D1Q96GG9 259 aa18.28■□□□□ 0.52
SHANK1-201ENST00000293441 GPBP1L1Q9HC44 474 aaPredicted RBP18.28■□□□□ 0.52
SHANK1-201ENST00000293441 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.28■□□□□ 0.52
SHANK1-201ENST00000293441 CAMSAP1Q5T5Y3 1602 aa18.27■□□□□ 0.52
SHANK1-201ENST00000293441 CHRNA3P32297 505 aa18.27■□□□□ 0.52
SHANK1-201ENST00000293441 DIAPH2O60879 1101 aa18.27■□□□□ 0.52
SHANK1-201ENST00000293441 CHGBP05060 677 aa18.27■□□□□ 0.52
SHANK1-201ENST00000293441 OR1G1P47890 313 aa18.27■□□□□ 0.52
SHANK1-201ENST00000293441 ST8SIA6P61647 398 aa18.27■□□□□ 0.52
SHANK1-201ENST00000293441 EZH2Q15910 746 aaKnown RBP18.27■□□□□ 0.52
SHANK1-201ENST00000293441 AGAP3Q96P47 875 aa18.27■□□□□ 0.52
SHANK1-201ENST00000293441 FGFR1OP2Q9NVK5 253 aa18.27■□□□□ 0.52
SHANK1-201ENST00000293441 TBCCQ15814 346 aa18.27■□□□□ 0.51
SHANK1-201ENST00000293441 GRAMD1BQ3KR37 738 aa18.27■□□□□ 0.51
SHANK1-201ENST00000293441 IZUMO3Q5VZ72 239 aa18.27■□□□□ 0.51
SHANK1-201ENST00000293441 IGDCC4Q8TDY8 1250 aa18.27■□□□□ 0.51
SHANK1-201ENST00000293441 MORC4Q8TE76 937 aa18.27■□□□□ 0.51
SHANK1-201ENST00000293441 AGBL1Q96MI9 1066 aa18.27■□□□□ 0.51
SHANK1-201ENST00000293441 NTSR2O95665 410 aa18.27■□□□□ 0.51
SHANK1-201ENST00000293441 HSP90AA5PQ58FG0 334 aa18.27■□□□□ 0.51
SHANK1-201ENST00000293441 USP33Q8TEY7 942 aa18.27■□□□□ 0.51
SHANK1-201ENST00000293441 RFFLQ8WZ73 363 aa18.27■□□□□ 0.51
SHANK1-201ENST00000293441 RRP15Q9Y3B9 282 aaKnown RBP18.27■□□□□ 0.51
SHANK1-201ENST00000293441 PCDHB7Q9Y5E2 793 aa18.27■□□□□ 0.51
SHANK1-201ENST00000293441 SLC25A27O95847 323 aa18.26■□□□□ 0.51
SHANK1-201ENST00000293441 MDM2Q00987 491 aaPredicted RBP18.26■□□□□ 0.51
SHANK1-201ENST00000293441 EXOSC10Q01780 885 aaKnown RBP18.26■□□□□ 0.51
SHANK1-201ENST00000293441 MGAT5BQ3V5L5 792 aa18.26■□□□□ 0.51
SHANK1-201ENST00000293441 TRIM33Q9UPN9 1127 aa18.26■□□□□ 0.51
SHANK1-201ENST00000293441 DDIASQ8IXT1 998 aa18.26■□□□□ 0.51
SHANK1-201ENST00000293441 ESYT3A0FGR9 886 aa18.26■□□□□ 0.51
SHANK1-201ENST00000293441 SLC16A3O15427 465 aaKnown RBP18.26■□□□□ 0.51
SHANK1-201ENST00000293441 MAGOHP61326 146 aaKnown RBP18.26■□□□□ 0.51
SHANK1-201ENST00000293441 KCNB1Q14721 858 aa18.26■□□□□ 0.51
SHANK1-201ENST00000293441 DGKDQ16760 1214 aa18.26■□□□□ 0.51
SHANK1-201ENST00000293441 PPHLN1Q8NEY8 458 aaKnown RBP18.26■□□□□ 0.51
SHANK1-201ENST00000293441 ALDH8A1Q9H2A2 487 aaPredicted RBP18.26■□□□□ 0.51
SHANK1-201ENST00000293441 STXBP3O00186 592 aa18.26■□□□□ 0.51
SHANK1-201ENST00000293441 KIAA0391O15091 583 aaKnown RBP18.26■□□□□ 0.51
SHANK1-201ENST00000293441 KRT17Q04695 432 aa18.26■□□□□ 0.51
SHANK1-201ENST00000293441 SREBF2Q12772 1141 aa18.26■□□□□ 0.51
SHANK1-201ENST00000293441 NUDT12Q9BQG2 462 aa18.26■□□□□ 0.51
SHANK1-201ENST00000293441 MUC3BQ9H195 1237 aa18.26■□□□□ 0.51
SHANK1-201ENST00000293441 UNC13BO14795 1591 aa18.26■□□□□ 0.51
SHANK1-201ENST00000293441 MAGEB2O15479 319 aa18.26■□□□□ 0.51
SHANK1-201ENST00000293441 SNRNP35Q16560 246 aaKnown RBP18.26■□□□□ 0.51
SHANK1-201ENST00000293441 SPAG7O75391 227 aa18.25■□□□□ 0.51
SHANK1-201ENST00000293441 RASA1P20936 1047 aa18.25■□□□□ 0.51
SHANK1-201ENST00000293441 ANKMY2Q8IV38 441 aa18.25■□□□□ 0.51
SHANK1-201ENST00000293441 ZNF512Q96ME7 567 aaPredicted RBP18.25■□□□□ 0.51
SHANK1-201ENST00000293441 ANO9A1A5B4 782 aa18.25■□□□□ 0.51
SHANK1-201ENST00000293441 ATF7IP2Q5U623 682 aa18.25■□□□□ 0.51
SHANK1-201ENST00000293441 SLC4A7Q9Y6M7 1214 aa18.25■□□□□ 0.51
SHANK1-201ENST00000293441 GRID2IPA4D2P6 1211 aa18.25■□□□□ 0.51
SHANK1-201ENST00000293441 GYG2O15488 501 aa18.25■□□□□ 0.51
SHANK1-201ENST00000293441 MORF4L2Q15014 288 aa18.25■□□□□ 0.51
SHANK1-201ENST00000293441 IL31Q6EBC2 164 aa18.25■□□□□ 0.51
SHANK1-201ENST00000293441 AGR3Q8TD06 166 aa18.25■□□□□ 0.51
SHANK1-201ENST00000293441 MOV10L1Q9BXT6 1211 aaKnown RBP18.25■□□□□ 0.51
SHANK1-201ENST00000293441 APEX2Q9UBZ4 518 aa18.25■□□□□ 0.51
SHANK1-201ENST00000293441 DCTN4Q9UJW0 460 aa18.25■□□□□ 0.51
SHANK1-201ENST00000293441 NCAPHQ15003 741 aa18.25■□□□□ 0.51
SHANK1-201ENST00000293441 GTF3C2Q8WUA4 911 aaPredicted RBP18.25■□□□□ 0.51
SHANK1-201ENST00000293441 NR1H3Q13133 447 aa18.25■□□□□ 0.51
SHANK1-201ENST00000293441 BEND6Q5SZJ8 279 aaPredicted RBP18.25■□□□□ 0.51
SHANK1-201ENST00000293441 ASAP3Q8TDY4 903 aa18.25■□□□□ 0.51
SHANK1-201ENST00000293441 SLC26A7Q8TE54 656 aa18.25■□□□□ 0.51
SHANK1-201ENST00000293441 MXRA8Q9BRK3 442 aa18.25■□□□□ 0.51
SHANK1-201ENST00000293441 TRIM9Q9C026 710 aa18.25■□□□□ 0.51
SHANK1-201ENST00000293441 AIPL1Q9NZN9 384 aa18.25■□□□□ 0.51
SHANK1-201ENST00000293441 ZFP69BQ9UJL9 534 aa18.25■□□□□ 0.51
SHANK1-201ENST00000293441 AK9Q5TCS8 1911 aa18.25■□□□□ 0.51
SHANK1-201ENST00000293441 DNAJC8O75937 253 aaPredicted RBP18.24■□□□□ 0.51
SHANK1-201ENST00000293441 MYO1DO94832 1006 aa18.24■□□□□ 0.51
SHANK1-201ENST00000293441 CYP2C9P11712 490 aa18.24■□□□□ 0.51
SHANK1-201ENST00000293441 CD4P01730 458 aa18.24■□□□□ 0.51
SHANK1-201ENST00000293441 TYK2P29597 1187 aa18.24■□□□□ 0.51
SHANK1-201ENST00000293441 CPT1AP50416 773 aa18.24■□□□□ 0.51
SHANK1-201ENST00000293441 SESN2P58004 480 aaPredicted RBP18.24■□□□□ 0.51
SHANK1-201ENST00000293441 EFTUD2Q15029 972 aaKnown RBP eCLIP18.24■□□□□ 0.51
SHANK1-201ENST00000293441 SGSM1Q2NKQ1 1148 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms