RNA–Protein interactions for RNA: ENST00000261980.2

VSX2-201, Transcript of visual system homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX2, Length 2,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2-201ENST00000261980 SLC1A5Q15758 541 aa17.59■□□□□ 0.41
VSX2-201ENST00000261980 SGO2Q562F6 1265 aa17.59■□□□□ 0.41
VSX2-201ENST00000261980 ENDOVQ8N8Q3 282 aaKnown RBP17.59■□□□□ 0.41
VSX2-201ENST00000261980 SLC35C1Q96A29 364 aa17.59■□□□□ 0.41
VSX2-201ENST00000261980 NSUN4Q96CB9 384 aaKnown RBP17.59■□□□□ 0.41
VSX2-201ENST00000261980 DNAJC18Q9H819 358 aa17.59■□□□□ 0.41
VSX2-201ENST00000261980 DDX25Q9UHL0 483 aaKnown RBP17.59■□□□□ 0.41
VSX2-201ENST00000261980 MYH3P11055 1940 aa17.59■□□□□ 0.41
VSX2-201ENST00000261980 USP17L5A8MUK1 530 aa17.58■□□□□ 0.41
VSX2-201ENST00000261980 TP73O15350 636 aa17.58■□□□□ 0.41
VSX2-201ENST00000261980 ZSCAN9O15535 394 aaPredicted RBP17.58■□□□□ 0.41
VSX2-201ENST00000261980 TTLL1O95922 423 aa17.58■□□□□ 0.41
VSX2-201ENST00000261980 CYP11B2P19099 503 aa17.58■□□□□ 0.41
VSX2-201ENST00000261980 FUT4P22083 530 aa17.58■□□□□ 0.41
VSX2-201ENST00000261980 SKIV2L2P42285 1042 aaKnown RBP17.58■□□□□ 0.41
VSX2-201ENST00000261980 PKN2Q16513 984 aaKnown RBP17.58■□□□□ 0.41
VSX2-201ENST00000261980 WDR72Q3MJ13 1102 aa17.58■□□□□ 0.41
VSX2-201ENST00000261980 CCDC152Q4G0S7 254 aa17.58■□□□□ 0.41
VSX2-201ENST00000261980 DGKHQ86XP1 1220 aa17.58■□□□□ 0.41
VSX2-201ENST00000261980 SMC6Q96SB8 1091 aa17.58■□□□□ 0.41
VSX2-201ENST00000261980 KRT82Q9NSB4 513 aa17.58■□□□□ 0.41
VSX2-201ENST00000261980 DDX18Q9NVP1 670 aaKnown RBP17.58■□□□□ 0.41
VSX2-201ENST00000261980 SOX5P35711 763 aa17.58■□□□□ 0.4
VSX2-201ENST00000261980 TBC1D10BQ4KMP7 808 aaPredicted RBP17.58■□□□□ 0.4
VSX2-201ENST00000261980 ILDR2Q71H61 639 aa17.58■□□□□ 0.4
VSX2-201ENST00000261980 ATL2Q8NHH9 583 aa17.58■□□□□ 0.4
VSX2-201ENST00000261980 FAM161BQ96MY7 647 aa17.58■□□□□ 0.4
VSX2-201ENST00000261980 PARP2Q9UGN5 583 aa17.58■□□□□ 0.4
VSX2-201ENST00000261980 A0A1W2PPM1 405 aa17.58■□□□□ 0.4
VSX2-201ENST00000261980 MAGEA13PA6NCF6 341 aa17.58■□□□□ 0.4
VSX2-201ENST00000261980 FOXN3O00409 490 aaPredicted RBP17.58■□□□□ 0.4
VSX2-201ENST00000261980 FAM200BP0CF97 657 aa17.58■□□□□ 0.4
VSX2-201ENST00000261980 PTPN4P29074 926 aa17.58■□□□□ 0.4
VSX2-201ENST00000261980 HOXD13P35453 343 aa17.58■□□□□ 0.4
VSX2-201ENST00000261980 YARSP54577 528 aaKnown RBP17.58■□□□□ 0.4
VSX2-201ENST00000261980 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.58■□□□□ 0.4
VSX2-201ENST00000261980 CBWD6Q4V339 395 aa17.58■□□□□ 0.4
VSX2-201ENST00000261980 CAVIN4Q5BKX8 364 aa17.58■□□□□ 0.4
VSX2-201ENST00000261980 CBWD3Q5JTY5 395 aa17.58■□□□□ 0.4
VSX2-201ENST00000261980 CBWD5Q5RIA9 395 aa17.58■□□□□ 0.4
VSX2-201ENST00000261980 OTOAQ7RTW8 1153 aa17.58■□□□□ 0.4
VSX2-201ENST00000261980 NCAPG2Q86XI2 1143 aa17.58■□□□□ 0.4
VSX2-201ENST00000261980 DUOX1Q9NRD9 1551 aa17.57■□□□□ 0.4
VSX2-201ENST00000261980 NR3C1P04150 777 aa17.57■□□□□ 0.4
VSX2-201ENST00000261980 TMEM253P0C7T8 217 aa17.57■□□□□ 0.4
VSX2-201ENST00000261980 POLD1P28340 1107 aa17.57■□□□□ 0.4
VSX2-201ENST00000261980 CETN2P41208 172 aa17.57■□□□□ 0.4
VSX2-201ENST00000261980 DYNC1I2Q13409 638 aaKnown RBP17.57■□□□□ 0.4
VSX2-201ENST00000261980 PDIA5Q14554 519 aa17.57■□□□□ 0.4
VSX2-201ENST00000261980 ARSHQ5FYA8 562 aa17.57■□□□□ 0.4
VSX2-201ENST00000261980 LRRC47Q8N1G4 583 aaKnown RBP17.57■□□□□ 0.4
VSX2-201ENST00000261980 HIPK4Q8NE63 616 aa17.57■□□□□ 0.4
VSX2-201ENST00000261980 SHKBP1Q8TBC3 707 aa17.57■□□□□ 0.4
VSX2-201ENST00000261980 HAS1Q92839 578 aa17.57■□□□□ 0.4
VSX2-201ENST00000261980 ZSWIM1Q9BR11 485 aa17.57■□□□□ 0.4
VSX2-201ENST00000261980 RUSC1Q9BVN2 902 aa17.57■□□□□ 0.4
VSX2-201ENST00000261980 DMAP1Q9NPF5 467 aaPredicted RBP17.57■□□□□ 0.4
VSX2-201ENST00000261980 PCDHA2Q9Y5H9 948 aa17.57■□□□□ 0.4
VSX2-201ENST00000261980 EXOC1LA0A1B0GW35 172 aa17.57■□□□□ 0.4
VSX2-201ENST00000261980 PGM3O95394 542 aa17.57■□□□□ 0.4
VSX2-201ENST00000261980 PSMG1O95456 288 aa17.57■□□□□ 0.4
VSX2-201ENST00000261980 ATP5DP30049 168 aa17.57■□□□□ 0.4
VSX2-201ENST00000261980 SLC16A2P36021 539 aa17.57■□□□□ 0.4
VSX2-201ENST00000261980 PRKCIP41743 596 aa17.57■□□□□ 0.4
VSX2-201ENST00000261980 SLC34A1Q06495 639 aa17.57■□□□□ 0.4
VSX2-201ENST00000261980 SPDYCQ5MJ68 293 aa17.57■□□□□ 0.4
VSX2-201ENST00000261980 INTS5Q6P9B9 1019 aaKnown RBP17.57■□□□□ 0.4
VSX2-201ENST00000261980 CLNKQ7Z7G1 428 aa17.57■□□□□ 0.4
VSX2-201ENST00000261980 FBXO27Q8NI29 283 aa17.57■□□□□ 0.4
VSX2-201ENST00000261980 HIC2Q96JB3 615 aa17.57■□□□□ 0.4
VSX2-201ENST00000261980 SPATA16Q9BXB7 569 aa17.57■□□□□ 0.4
VSX2-201ENST00000261980 ROPN1BQ9BZX4 212 aaPredicted RBP17.57■□□□□ 0.4
VSX2-201ENST00000261980 ROPN1Q9HAT0 212 aaPredicted RBP17.57■□□□□ 0.4
VSX2-201ENST00000261980 HEY2Q9UBP5 337 aa17.57■□□□□ 0.4
VSX2-201ENST00000261980 ANAPC5Q9UJX4 755 aa17.57■□□□□ 0.4
VSX2-201ENST00000261980 SERPINA10Q9UK55 444 aa17.57■□□□□ 0.4
VSX2-201ENST00000261980 MTUS1Q9ULD2 1270 aa17.57■□□□□ 0.4
VSX2-201ENST00000261980 SYNGAP1Q96PV0 1343 aa17.56■□□□□ 0.4
VSX2-201ENST00000261980 COL1A1P02452 1464 aaPredicted RBP17.56■□□□□ 0.4
VSX2-201ENST00000261980 TXNDC9O14530 226 aa17.56■□□□□ 0.4
VSX2-201ENST00000261980 BANF1O75531 89 aa17.56■□□□□ 0.4
VSX2-201ENST00000261980 TMED1Q13445 227 aa17.56■□□□□ 0.4
VSX2-201ENST00000261980 WASHC2DQ5SRD0 308 aa17.56■□□□□ 0.4
VSX2-201ENST00000261980 ZNF772Q68DY9 489 aaPredicted RBP17.56■□□□□ 0.4
VSX2-201ENST00000261980 RINLQ6ZS11 566 aa17.56■□□□□ 0.4
VSX2-201ENST00000261980 SLC13A5Q86YT5 568 aaPredicted RBP17.56■□□□□ 0.4
VSX2-201ENST00000261980 SH3TC2Q8TF17 1288 aa17.56■□□□□ 0.4
VSX2-201ENST00000261980 SLC5A5Q92911 643 aa17.56■□□□□ 0.4
VSX2-201ENST00000261980 PTPRN2Q92932 1015 aa17.56■□□□□ 0.4
VSX2-201ENST00000261980 BICD1Q96G01 975 aa17.56■□□□□ 0.4
VSX2-201ENST00000261980 ZNF184Q99676 751 aaPredicted RBP17.56■□□□□ 0.4
VSX2-201ENST00000261980 E7ENQ6 273 aa17.56■□□□□ 0.4
VSX2-201ENST00000261980 MAGEB3O15480 346 aa17.56■□□□□ 0.4
VSX2-201ENST00000261980 MED24O75448 989 aa17.56■□□□□ 0.4
VSX2-201ENST00000261980 DCTN3O75935 186 aa17.56■□□□□ 0.4
VSX2-201ENST00000261980 DRG2P55039 364 aaKnown RBP17.56■□□□□ 0.4
VSX2-201ENST00000261980 MOGSQ13724 837 aa17.56■□□□□ 0.4
VSX2-201ENST00000261980 FASTKD3Q14CZ7 662 aaKnown RBP17.56■□□□□ 0.4
VSX2-201ENST00000261980 ACBD5Q5T8D3 534 aaPredicted RBP17.56■□□□□ 0.4
VSX2-201ENST00000261980 DAGLBQ8NCG7 672 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms