RNA–Protein interactions for RNA: YOR068C

VAM10, Transcript of Protein involved in vacuole morphogenesis, yeast

Gene VAM10, Length 345 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAM10	YOR068C	TDA1	Q03533	586 aa		3.02	□□□□□ -1.93
VAM10	YOR068C	NUP53	Q03790	475 aa		3.02	□□□□□ -1.93
VAM10	YOR068C	RAV2	Q03956	351 aa		3.02	□□□□□ -1.93
VAM10	YOR068C	YMR087W	Q04299	284 aa		3.02	□□□□□ -1.93
VAM10	YOR068C	YMR027W	Q04371	470 aa		3.02	□□□□□ -1.93
VAM10	YOR068C	FMP42	Q04991	504 aa		3.02	□□□□□ -1.93
VAM10	YOR068C	YLR281C	Q05863	155 aa		3.02	□□□□□ -1.93
VAM10	YOR068C	BNA5	Q05979	453 aa		3.02	□□□□□ -1.93
VAM10	YOR068C	YPQ1	Q12010	308 aa		3.02	□□□□□ -1.93
VAM10	YOR068C	MDM32	Q12171	622 aa		3.02	□□□□□ -1.93
VAM10	YOR068C	YDL009C	Q12210	107 aa		3.02	□□□□□ -1.93
VAM10	YOR068C	TPO4	Q12256	659 aa		3.02	□□□□□ -1.93
VAM10	YOR068C	PST2	Q12335	198 aa	Known RBP	3.02	□□□□□ -1.93
VAM10	YOR068C	DCN1	Q12395	269 aa		3.02	□□□□□ -1.93
VAM10	YOR068C	DDI2	P0CH63	225 aa		3.01	□□□□□ -1.93
VAM10	YOR068C	DDI3	P0CH64	225 aa		3.01	□□□□□ -1.93
VAM10	YOR068C	IMA3	P0CW40	589 aa		3.01	□□□□□ -1.93
VAM10	YOR068C	IMA4	P0CW41	589 aa		3.01	□□□□□ -1.93
VAM10	YOR068C	CTA1	P15202	515 aa		3.01	□□□□□ -1.93
VAM10	YOR068C	RSA4	P25382	515 aa	Known RBP	3.01	□□□□□ -1.93
VAM10	YOR068C	YKL162C	P36052	402 aa		3.01	□□□□□ -1.93
VAM10	YOR068C	MRPL15	P36523	253 aa		3.01	□□□□□ -1.93
VAM10	YOR068C	YBR056W	P38081	501 aa		3.01	□□□□□ -1.93
VAM10	YOR068C	INM1	P38710	295 aa		3.01	□□□□□ -1.93
VAM10	YOR068C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	3.01	□□□□□ -1.93	not detected
VAM10	YOR068C	RRP4	P38792	359 aa	Known RBP	3.01	□□□□□ -1.93
VAM10	YOR068C	LYS1	P38998	373 aa	RIP-Chip data	3.01	□□□□□ -1.93	not detected
VAM10	YOR068C	VMA7	P39111	118 aa		3.01	□□□□□ -1.93
VAM10	YOR068C	YER079W	P40052	210 aa	Known RBP	3.01	□□□□□ -1.93
VAM10	YOR068C	RPE1	P46969	238 aa		3.01	□□□□□ -1.93
VAM10	YOR068C	NUP57	P48837	541 aa		3.01	□□□□□ -1.93
VAM10	YOR068C	YIP1	P53039	248 aa		3.01	□□□□□ -1.93
VAM10	YOR068C	JAC1	P53193	184 aa		3.01	□□□□□ -1.93
VAM10	YOR068C	COG7	P53195	279 aa		3.01	□□□□□ -1.93
VAM10	YOR068C	MPA43	P53583	542 aa	Predicted RBP	3.01	□□□□□ -1.93
VAM10	YOR068C	BIO4	P53630	237 aa		3.01	□□□□□ -1.93
VAM10	YOR068C	IMP4	P53941	290 aa	Known RBP	3.01	□□□□□ -1.93
VAM10	YOR068C	SED5	Q01590	340 aa		3.01	□□□□□ -1.93
VAM10	YOR068C	YMR010W	Q03687	405 aa		3.01	□□□□□ -1.93
VAM10	YOR068C	SMP3	Q04174	516 aa		3.01	□□□□□ -1.93
VAM10	YOR068C	YDR124W	Q04608	324 aa		3.01	□□□□□ -1.93
VAM10	YOR068C	INM2	Q05533	292 aa		3.01	□□□□□ -1.93
VAM10	YOR068C	GRX8	Q05926	109 aa		3.01	□□□□□ -1.93
VAM10	YOR068C	ARC18	Q05933	178 aa	Known RBP	3.01	□□□□□ -1.93
VAM10	YOR068C	NOC4	Q06512	552 aa	Predicted RBP	3.01	□□□□□ -1.93
VAM10	YOR068C	ASR1	Q06834	288 aa		3.01	□□□□□ -1.93
VAM10	YOR068C	PBP4	Q07362	185 aa	Known RBP	3.01	□□□□□ -1.93
VAM10	YOR068C	HEM25	Q07534	307 aa		3.01	□□□□□ -1.93
VAM10	YOR068C	IMA2	Q08295	589 aa		3.01	□□□□□ -1.93
VAM10	YOR068C	SGT1	Q08446	395 aa		3.01	□□□□□ -1.93
VAM10	YOR068C	ATP14	Q12349	124 aa		3.01	□□□□□ -1.93
VAM10	YOR068C	FOL3	Q12676	427 aa	Predicted RBP	3.01	□□□□□ -1.93
VAM10	YOR068C	CSR2	Q12734	1121 aa		3.01	□□□□□ -1.93
VAM10	YOR068C	PSK1	P31374	1356 aa		3	□□□□□ -1.93
VAM10	YOR068C	SAL1	D6W196	494 aa		3	□□□□□ -1.93
VAM10	YOR068C	ILV1	P00927	576 aa	Known RBP	3	□□□□□ -1.93
VAM10	YOR068C	CDC7	P06243	507 aa		3	□□□□□ -1.93
VAM10	YOR068C	CMD1	P06787	147 aa	Known RBP	3	□□□□□ -1.93
VAM10	YOR068C	HEM15	P16622	393 aa		3	□□□□□ -1.93
VAM10	YOR068C	SPO12	P17123	173 aa		3	□□□□□ -1.93
VAM10	YOR068C	SLM5	P25345	492 aa	Known RBP	3	□□□□□ -1.93
VAM10	YOR068C	YCR100C	P25606	316 aa		3	□□□□□ -1.93
VAM10	YOR068C	TAH1	P25638	111 aa	Predicted RBP	3	□□□□□ -1.93
VAM10	YOR068C	HYM1	P32464	399 aa		3	□□□□□ -1.93
VAM10	YOR068C	AEP1	P32493	518 aa		3	□□□□□ -1.93
VAM10	YOR068C	CAT2	P32796	670 aa	Known RBP	3	□□□□□ -1.93
VAM10	YOR068C	FRM2	P37261	193 aa		3	□□□□□ -1.93
VAM10	YOR068C	YCR041W	P37265	110 aa		3	□□□□□ -1.93
VAM10	YOR068C	YPT31	P38555	223 aa	Known RBP	3	□□□□□ -1.93
VAM10	YOR068C	YHR127W	P38833	243 aa	Known RBP	3	□□□□□ -1.93
VAM10	YOR068C	YHR177W	P38867	453 aa		3	□□□□□ -1.93
VAM10	YOR068C	KRE29	P40026	464 aa		3	□□□□□ -1.93
VAM10	YOR068C	SER33	P40510	469 aa		3	□□□□□ -1.93
VAM10	YOR068C	YIL067C	P40514	678 aa		3	□□□□□ -1.93
VAM10	YOR068C	IRC18	P47056	224 aa		3	□□□□□ -1.93
VAM10	YOR068C	YAE1	P47118	141 aa	Predicted RBP	3	□□□□□ -1.93
VAM10	YOR068C	SOL1	P50278	321 aa		3	□□□□□ -1.93
VAM10	YOR068C	POP6	P53218	158 aa		3	□□□□□ -1.93
VAM10	YOR068C	CPD1	P53314	239 aa		3	□□□□□ -1.93
VAM10	YOR068C	KTR5	P53966	522 aa	Predicted RBP	3	□□□□□ -1.93
VAM10	YOR068C	BET5	Q03630	159 aa		3	□□□□□ -1.93
VAM10	YOR068C	TRM12	Q04235	462 aa		3	□□□□□ -1.93
VAM10	YOR068C	SML1	Q04964	104 aa		3	□□□□□ -1.93
VAM10	YOR068C	YTH1	Q06102	208 aa	Predicted RBP	3	□□□□□ -1.93
VAM10	YOR068C	ATG39	Q06159	398 aa		3	□□□□□ -1.93
VAM10	YOR068C	NKP2	Q06162	153 aa		3	□□□□□ -1.93
VAM10	YOR068C	MRX9	Q07349	420 aa	Known RBP	3	□□□□□ -1.93
VAM10	YOR068C	LDS2	Q08218	356 aa		3	□□□□□ -1.93
VAM10	YOR068C	ALE1	Q08548	619 aa		3	□□□□□ -1.93
VAM10	YOR068C	YLR046C	Q12253	270 aa		3	□□□□□ -1.93
VAM10	YOR068C	AIM45	Q12480	344 aa	Known RBP	3	□□□□□ -1.93
VAM10	YOR068C	COX3	P00420	269 aa		2.99	□□□□□ -1.93
VAM10	YOR068C	CYC3	P06182	269 aa		2.99	□□□□□ -1.93
VAM10	YOR068C	PBI2	P0CT04	75 aa	Known RBP	2.99	□□□□□ -1.93
VAM10	YOR068C	GPA2	P10823	449 aa		2.99	□□□□□ -1.93
VAM10	YOR068C	FCY2	P17064	533 aa		2.99	□□□□□ -1.93
VAM10	YOR068C	PHO13	P19881	312 aa		2.99	□□□□□ -1.93
VAM10	YOR068C	SEC59	P20048	519 aa		2.99	□□□□□ -1.93
VAM10	YOR068C	MCK1	P21965	375 aa	Known RBP	2.99	□□□□□ -1.93
VAM10	YOR068C	SCO1	P23833	295 aa		2.99	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms