RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W RPC17P47076 161 aa1.97□□□□□ -2.09
PEP12YOR036W YJR079WP47126 109 aa1.97□□□□□ -2.09
PEP12YOR036W FLC3P53121 802 aa1.97□□□□□ -2.09
PEP12YOR036W USE1P53146 245 aa1.97□□□□□ -2.09
PEP12YOR036W NOP13P53883 403 aaKnown RBP RIP-Chip data1.97□□□□□ -2.09not detected
PEP12YOR036W ASI3P53983 676 aa1.97□□□□□ -2.09
PEP12YOR036W OSH6Q02201 448 aa1.97□□□□□ -2.09
PEP12YOR036W YMR166CQ03829 368 aa1.97□□□□□ -2.09
PEP12YOR036W MRX8Q05473 314 aa1.97□□□□□ -2.09
PEP12YOR036W SPO77Q06134 477 aa1.97□□□□□ -2.09
PEP12YOR036W ATG17Q06410 417 aa1.97□□□□□ -2.09
PEP12YOR036W YPL264CQ08980 353 aa1.97□□□□□ -2.09
PEP12YOR036W RFM1Q12192 310 aa1.97□□□□□ -2.09
PEP12YOR036W YCT1Q12235 531 aa1.97□□□□□ -2.09
PEP12YOR036W ATG5Q12380 294 aa1.97□□□□□ -2.09
PEP12YOR036W YPL119C-AQ3E751 87 aa1.97□□□□□ -2.09
PEP12YOR036W POX1P13711 748 aa1.96□□□□□ -2.1
PEP12YOR036W RPB4P20433 221 aaPredicted RBP1.96□□□□□ -2.1
PEP12YOR036W PRE7P23724 241 aaKnown RBP1.96□□□□□ -2.1
PEP12YOR036W JEN1P36035 616 aa1.96□□□□□ -2.1
PEP12YOR036W YKL075CP36083 450 aa1.96□□□□□ -2.1
PEP12YOR036W PHO89P38361 574 aa1.96□□□□□ -2.1
PEP12YOR036W SLX9P53251 210 aaPredicted RBP1.96□□□□□ -2.1
PEP12YOR036W HST4P53688 370 aa1.96□□□□□ -2.1
PEP12YOR036W SWT21P53873 357 aaPredicted RBP1.96□□□□□ -2.1
PEP12YOR036W AAH1P53909 347 aa1.96□□□□□ -2.1
PEP12YOR036W TVP15Q03860 143 aa1.96□□□□□ -2.1
PEP12YOR036W NNT1Q05874 261 aa1.96□□□□□ -2.1
PEP12YOR036W YPR098CQ06089 161 aa1.96□□□□□ -2.1
PEP12YOR036W COQ10Q08058 207 aa1.96□□□□□ -2.1
PEP12YOR036W SAC3P46674 1301 aa1.95□□□□□ -2.1
PEP12YOR036W MRPL25P23369 157 aa1.95□□□□□ -2.1
PEP12YOR036W DPB2P24482 689 aaPredicted RBP1.95□□□□□ -2.1
PEP12YOR036W DOA4P32571 926 aa1.95□□□□□ -2.1
PEP12YOR036W YKT6P36015 200 aaKnown RBP1.95□□□□□ -2.1
PEP12YOR036W FZO1P38297 855 aa1.95□□□□□ -2.1
PEP12YOR036W GOS1P38736 223 aa1.95□□□□□ -2.1
PEP12YOR036W THO1P40040 218 aaKnown RBP1.95□□□□□ -2.1
PEP12YOR036W PGA2P53903 129 aa1.95□□□□□ -2.1
PEP12YOR036W CTF19Q02732 369 aa1.95□□□□□ -2.1
PEP12YOR036W PEX10Q05568 337 aa1.95□□□□□ -2.1
PEP12YOR036W PLB3Q08108 686 aa1.95□□□□□ -2.1
PEP12YOR036W JIP3O13555 125 aa1.94□□□□□ -2.1
PEP12YOR036W RHO1P06780 209 aaKnown RBP1.94□□□□□ -2.1
PEP12YOR036W ARG80P07249 177 aa1.94□□□□□ -2.1
PEP12YOR036W YKR104WP0CE69 306 aa1.94□□□□□ -2.1
PEP12YOR036W YOL163WP0CF20 169 aa1.94□□□□□ -2.1
PEP12YOR036W RPL24BP24000 155 aaKnown RBP1.94□□□□□ -2.1
PEP12YOR036W YCR102CP25608 368 aa1.94□□□□□ -2.1
PEP12YOR036W CSG2P35206 410 aa1.94□□□□□ -2.1
PEP12YOR036W VPS21P36017 210 aaKnown RBP1.94□□□□□ -2.1
PEP12YOR036W YBL081WP38180 368 aaKnown RBP1.94□□□□□ -2.1
PEP12YOR036W TRM7P38238 310 aaKnown RBP1.94□□□□□ -2.1
PEP12YOR036W ARN2P38724 620 aa1.94□□□□□ -2.1
PEP12YOR036W YFR045WP43617 309 aa1.94□□□□□ -2.1
PEP12YOR036W RPE1P46969 238 aa1.94□□□□□ -2.1
PEP12YOR036W CPR7P47103 393 aa1.94□□□□□ -2.1
PEP12YOR036W MRH4P53166 561 aa1.94□□□□□ -2.1
PEP12YOR036W CGR1P53188 120 aa1.94□□□□□ -2.1
PEP12YOR036W ZRG17P53735 605 aa1.94□□□□□ -2.1
PEP12YOR036W YPL039WQ03080 316 aa1.94□□□□□ -2.1
PEP12YOR036W SPG4Q04438 115 aa1.94□□□□□ -2.1
PEP12YOR036W YDR222WQ04925 415 aa1.94□□□□□ -2.1
PEP12YOR036W SNU23Q12368 194 aaPredicted RBP1.94□□□□□ -2.1
PEP12YOR036W ADF1Q2V2Q1 113 aa1.94□□□□□ -2.1
PEP12YOR036W SEY1Q99287 776 aa1.94□□□□□ -2.1
PEP12YOR036W ZWF1P11412 505 aaKnown RBP1.93□□□□□ -2.1
PEP12YOR036W YAK1P14680 807 aa1.93□□□□□ -2.1
PEP12YOR036W PBN1P25580 416 aa1.93□□□□□ -2.1
PEP12YOR036W PPA2P28239 310 aa1.93□□□□□ -2.1
PEP12YOR036W VMA6P32366 345 aaKnown RBP1.93□□□□□ -2.1
PEP12YOR036W RTC3P38804 111 aaPredicted RBP1.93□□□□□ -2.1
PEP12YOR036W SUR2P38992 349 aa1.93□□□□□ -2.1
PEP12YOR036W YRB1P41920 201 aaKnown RBP1.93□□□□□ -2.1
PEP12YOR036W OST3P48439 350 aa1.93□□□□□ -2.1
PEP12YOR036W RSM27P53305 110 aa1.93□□□□□ -2.1
PEP12YOR036W GTO3Q04806 366 aa1.93□□□□□ -2.1
PEP12YOR036W ATG38Q05789 226 aaKnown RBP1.93□□□□□ -2.1
PEP12YOR036W DCR2Q05924 578 aa1.93□□□□□ -2.1
PEP12YOR036W YPR147CQ06522 304 aaKnown RBP1.93□□□□□ -2.1
PEP12YOR036W RRP40Q08285 240 aaKnown RBP1.93□□□□□ -2.1
PEP12YOR036W SMT3Q12306 101 aaKnown RBP1.93□□□□□ -2.1
PEP12YOR036W PRR2Q12310 699 aa1.93□□□□□ -2.1
PEP12YOR036W YBL112CQ3E7Y4 105 aa1.93□□□□□ -2.1
PEP12YOR036W NCB2Q92317 146 aa1.93□□□□□ -2.1
PEP12YOR036W CHD1P32657 1468 aa1.93□□□□□ -2.1
PEP12YOR036W THP2O13539 261 aaKnown RBP1.92□□□□□ -2.1
PEP12YOR036W NHP6BP11633 99 aaKnown RBP1.92□□□□□ -2.1
PEP12YOR036W MER1P16523 270 aa1.92□□□□□ -2.1
PEP12YOR036W BMH1P29311 267 aaKnown RBP1.92□□□□□ -2.1
PEP12YOR036W SGE1P33335 543 aa1.92□□□□□ -2.1
PEP12YOR036W DRE2P36152 348 aa1.92□□□□□ -2.1
PEP12YOR036W ECM13P38195 257 aa1.92□□□□□ -2.1
PEP12YOR036W URA8P38627 578 aaPredicted RBP1.92□□□□□ -2.1
PEP12YOR036W COX15P40086 486 aa1.92□□□□□ -2.1
PEP12YOR036W SNZ3P43545 298 aa1.92□□□□□ -2.1
PEP12YOR036W YGL034CP53186 121 aa1.92□□□□□ -2.1
PEP12YOR036W SNZ2P53824 298 aa1.92□□□□□ -2.1
PEP12YOR036W GIM3P53900 129 aa1.92□□□□□ -2.1
PEP12YOR036W RHO3Q00245 231 aaKnown RBP1.92□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 81.8 ms