RNA–Protein interactions for RNA: YOL133W

HRT1, Transcript of RING-H2 domain core subunit of multiple ubiquitin ligase complexes, yeast

Gene HRT1, Length 366 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HRT1	YOL133W	CTR3	Q06686	241 aa		3.05	□□□□□ -1.92
HRT1	YOL133W	YOL019W	Q08157	551 aa		3.05	□□□□□ -1.92
HRT1	YOL133W	ISD11	Q6Q560	94 aa		3.05	□□□□□ -1.92
HRT1	YOL133W	GDH2	P33327	1092 aa	Known RBP	3.04	□□□□□ -1.92
HRT1	YOL133W	PRS2	P38620	318 aa	Known RBP	3.04	□□□□□ -1.92
HRT1	YOL133W	TIM21	P53220	239 aa		3.04	□□□□□ -1.92
HRT1	YOL133W	CAB4	P53332	305 aa		3.04	□□□□□ -1.92
HRT1	YOL133W	RRT8	Q08219	342 aa		3.04	□□□□□ -1.92
HRT1	YOL133W	SMT3	Q12306	101 aa	Known RBP	3.04	□□□□□ -1.92
HRT1	YOL133W	DPM1	P14020	267 aa	Known RBP	3.03	□□□□□ -1.92
HRT1	YOL133W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	3.03	□□□□□ -1.92	not detected
HRT1	YOL133W	YGL034C	P53186	121 aa		3.03	□□□□□ -1.92
HRT1	YOL133W	ALG11	P53954	548 aa	Known RBP	3.03	□□□□□ -1.92
HRT1	YOL133W	SNF8	Q12483	233 aa		3.03	□□□□□ -1.92
HRT1	YOL133W	HIS1	P00498	297 aa	Known RBP	3.02	□□□□□ -1.93
HRT1	YOL133W	QRI5	P32344	111 aa		3.02	□□□□□ -1.93
HRT1	YOL133W	COY1	P34237	679 aa		3.02	□□□□□ -1.93
HRT1	YOL133W	ECM13	P38195	257 aa		3.02	□□□□□ -1.93
HRT1	YOL133W	SMB1	P40018	196 aa	Known RBP	3.02	□□□□□ -1.93
HRT1	YOL133W	YJL028W	P47062	111 aa		3.02	□□□□□ -1.93
HRT1	YOL133W	SSU72	P53538	206 aa	Predicted RBP	3.02	□□□□□ -1.93
HRT1	YOL133W	MPP6	P53725	186 aa	Predicted RBP	3.02	□□□□□ -1.93
HRT1	YOL133W	AAH1	P53909	347 aa		3.02	□□□□□ -1.93
HRT1	YOL133W	MIX17	Q03667	156 aa		3.02	□□□□□ -1.93
HRT1	YOL133W	EMI1	Q04406	187 aa		3.02	□□□□□ -1.93
HRT1	YOL133W	NUP157	P40064	1391 aa	Known RBP	3.01	□□□□□ -1.93
HRT1	YOL133W	BMH1	P29311	267 aa	Known RBP	3.01	□□□□□ -1.93
HRT1	YOL133W	UTR5	P32630	166 aa		3.01	□□□□□ -1.93
HRT1	YOL133W	YKR032W	P36127	104 aa		3.01	□□□□□ -1.93
HRT1	YOL133W	MRX3	P38172	270 aa		3.01	□□□□□ -1.93
HRT1	YOL133W	GLG2	P47011	380 aa		3.01	□□□□□ -1.93
HRT1	YOL133W	MDM34	P53083	459 aa		3.01	□□□□□ -1.93
HRT1	YOL133W	SYF2	P53277	215 aa	Predicted RBP	3.01	□□□□□ -1.93
HRT1	YOL133W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	3.01	□□□□□ -1.93	not detected
HRT1	YOL133W	PLB3	Q08108	686 aa		3.01	□□□□□ -1.93
HRT1	YOL133W	YBR096W	P38256	230 aa		3	□□□□□ -1.93
HRT1	YOL133W	MED6	P38782	295 aa		3	□□□□□ -1.93
HRT1	YOL133W	BIG1	P38813	335 aa		3	□□□□□ -1.93
HRT1	YOL133W	YER188W	P40103	239 aa		3	□□□□□ -1.93
HRT1	YOL133W	YJR012C	P47087	207 aa		3	□□□□□ -1.93
HRT1	YOL133W	YJR146W	P47174	117 aa		3	□□□□□ -1.93
HRT1	YOL133W	EBS1	Q03466	884 aa	Known RBP	3	□□□□□ -1.93
HRT1	YOL133W	SDO1	Q07953	250 aa	Known RBP	3	□□□□□ -1.93
HRT1	YOL133W	RPL26A	P05743	127 aa	Known RBP	2.99	□□□□□ -1.93
HRT1	YOL133W	RAD10	P06838	210 aa		2.99	□□□□□ -1.93
HRT1	YOL133W	CWP1	P28319	239 aa		2.99	□□□□□ -1.93
HRT1	YOL133W	PRS4	P38063	326 aa	Predicted RBP	2.99	□□□□□ -1.93
HRT1	YOL133W	RPL10	P41805	221 aa	Known RBP	2.99	□□□□□ -1.93
HRT1	YOL133W	RPL26B	P53221	127 aa	Known RBP	2.99	□□□□□ -1.93
HRT1	YOL133W	SLX9	P53251	210 aa	Predicted RBP	2.99	□□□□□ -1.93
HRT1	YOL133W	CTF19	Q02732	369 aa		2.99	□□□□□ -1.93
HRT1	YOL133W	ADH6	Q04894	360 aa	Known RBP	2.99	□□□□□ -1.93
HRT1	YOL133W	YEL009C-A	A0A023PZF2	135 aa		2.98	□□□□□ -1.93
HRT1	YOL133W	RSR1	P13856	272 aa		2.98	□□□□□ -1.93
HRT1	YOL133W	DAL82	P21705	255 aa		2.98	□□□□□ -1.93
HRT1	YOL133W	DPB2	P24482	689 aa	Predicted RBP	2.98	□□□□□ -1.93
HRT1	YOL133W	SFC1	P33303	322 aa		2.98	□□□□□ -1.93
HRT1	YOL133W	TEM1	P38987	245 aa		2.98	□□□□□ -1.93
HRT1	YOL133W	YJR141W	P47172	347 aa	Predicted RBP	2.98	□□□□□ -1.93
HRT1	YOL133W	NIF3	P53081	288 aa		2.98	□□□□□ -1.93
HRT1	YOL133W	RSM10	Q03201	203 aa		2.98	□□□□□ -1.93
HRT1	YOL133W	COQ10	Q08058	207 aa		2.98	□□□□□ -1.93
HRT1	YOL133W	VPS68	Q12016	184 aa		2.98	□□□□□ -1.93
HRT1	YOL133W	YPL150W	Q12152	901 aa		2.98	□□□□□ -1.93
HRT1	YOL133W	HOM6	P31116	359 aa	Known RBP	2.97	□□□□□ -1.93
HRT1	YOL133W	YMR114C	Q04471	368 aa	Known RBP	2.97	□□□□□ -1.93
HRT1	YOL133W	EMP46	Q12396	444 aa		2.97	□□□□□ -1.93
HRT1	YOL133W	YPL119C-A	Q3E751	87 aa		2.97	□□□□□ -1.93
HRT1	YOL133W	SGA1	P08019	549 aa		2.96	□□□□□ -1.94
HRT1	YOL133W	POX1	P13711	748 aa		2.96	□□□□□ -1.94
HRT1	YOL133W	YUH1	P35127	236 aa		2.96	□□□□□ -1.94
HRT1	YOL133W	DRE2	P36152	348 aa		2.96	□□□□□ -1.94
HRT1	YOL133W	BOP2	Q06150	570 aa		2.96	□□□□□ -1.94
HRT1	YOL133W	YOL107W	Q12239	342 aa		2.96	□□□□□ -1.94
HRT1	YOL133W	GEP5	Q12393	293 aa		2.96	□□□□□ -1.94
HRT1	YOL133W	JEN1	P36035	616 aa		2.95	□□□□□ -1.94
HRT1	YOL133W	THO1	P40040	218 aa	Known RBP	2.95	□□□□□ -1.94
HRT1	YOL133W	COG3	P40094	801 aa		2.95	□□□□□ -1.94
HRT1	YOL133W	GON7	P46984	123 aa		2.95	□□□□□ -1.94
HRT1	YOL133W	MYO5	Q04439	1219 aa	Known RBP	2.95	□□□□□ -1.94
HRT1	YOL133W	PEX10	Q05568	337 aa		2.95	□□□□□ -1.94
HRT1	YOL133W	VPS3	P23643	1011 aa		2.94	□□□□□ -1.94
HRT1	YOL133W	CLB6	P32943	380 aa		2.94	□□□□□ -1.94
HRT1	YOL133W	CSM4	Q08955	156 aa		2.94	□□□□□ -1.94
HRT1	YOL133W	MSH5	Q12175	901 aa		2.94	□□□□□ -1.94
HRT1	YOL133W	YOR029W	Q12243	111 aa		2.94	□□□□□ -1.94
HRT1	YOL133W	ATG31	Q12421	196 aa		2.94	□□□□□ -1.94
HRT1	YOL133W	MRP1	P10662	321 aa	Known RBP	2.93	□□□□□ -1.94
HRT1	YOL133W	GOS1	P38736	223 aa		2.93	□□□□□ -1.94
HRT1	YOL133W	TIF34	P40217	347 aa	Known RBP	2.93	□□□□□ -1.94
HRT1	YOL133W	YJL016W	P47072	561 aa		2.93	□□□□□ -1.94
HRT1	YOL133W	YNL134C	P53912	376 aa	Known RBP	2.93	□□□□□ -1.94
HRT1	YOL133W	YPR011C	Q12251	326 aa		2.93	□□□□□ -1.94
HRT1	YOL133W	RAD3	P06839	778 aa		2.92	□□□□□ -1.94
HRT1	YOL133W	JHD2	P47156	728 aa	Predicted RBP	2.92	□□□□□ -1.94
HRT1	YOL133W	MRH4	P53166	561 aa		2.92	□□□□□ -1.94
HRT1	YOL133W	GRH1	Q04410	372 aa	Known RBP	2.92	□□□□□ -1.94
HRT1	YOL133W	YLR173W	Q06247	608 aa		2.92	□□□□□ -1.94
HRT1	YOL133W	BTS1	Q12051	335 aa		2.92	□□□□□ -1.94
HRT1	YOL133W	RNP1	P32385	249 aa		2.91	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms