RNA–Protein interactions for RNA: YOL031C

SIL1, Transcript of Nucleotide exchange factor for the ER lumenal Hsp70 chaperone Kar2p, yeast

Gene SIL1, Length 1,266 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIL1	YOL031C	INM2	Q05533	292 aa		3.11	□□□□□ -1.91
SIL1	YOL031C	PBA1	Q05778	276 aa		3.11	□□□□□ -1.91
SIL1	YOL031C	YLR177W	Q06251	628 aa		3.11	□□□□□ -1.91
SIL1	YOL031C	SRL1	Q08673	210 aa		3.11	□□□□□ -1.91
SIL1	YOL031C	YOR292C	Q08743	309 aa		3.11	□□□□□ -1.91
SIL1	YOL031C	YPL278C	Q08990	100 aa		3.11	□□□□□ -1.91
SIL1	YOL031C	PPT2	Q12036	173 aa		3.11	□□□□□ -1.91
SIL1	YOL031C	RPL21B	Q12672	160 aa	Known RBP	3.11	□□□□□ -1.91
SIL1	YOL031C	YKR104W	P0CE69	306 aa		3.1	□□□□□ -1.91
SIL1	YOL031C	RPL35A	P0CX84	120 aa	Known RBP	3.1	□□□□□ -1.91
SIL1	YOL031C	RPL35B	P0CX85	120 aa	Known RBP	3.1	□□□□□ -1.91
SIL1	YOL031C	URA6	P15700	204 aa		3.1	□□□□□ -1.91
SIL1	YOL031C	TRR1	P29509	319 aa	Known RBP	3.1	□□□□□ -1.91
SIL1	YOL031C	ATS1	P31386	333 aa		3.1	□□□□□ -1.91
SIL1	YOL031C	NTF2	P33331	125 aa	Known RBP	3.1	□□□□□ -1.91
SIL1	YOL031C	YBL059W	P34224	193 aa		3.1	□□□□□ -1.91
SIL1	YOL031C	PRY2	P36110	329 aa		3.1	□□□□□ -1.91
SIL1	YOL031C	ATG12	P38316	186 aa		3.1	□□□□□ -1.91
SIL1	YOL031C	CHL4	P38907	458 aa		3.1	□□□□□ -1.91
SIL1	YOL031C	YND1	P40009	630 aa		3.1	□□□□□ -1.91
SIL1	YOL031C	ERG10	P41338	398 aa	Known RBP	3.1	□□□□□ -1.91
SIL1	YOL031C	EGT2	P42835	1041 aa		3.1	□□□□□ -1.91
SIL1	YOL031C	STB1	P42845	420 aa		3.1	□□□□□ -1.91
SIL1	YOL031C	TMA22	P47089	198 aa	Predicted RBP	3.1	□□□□□ -1.91
SIL1	YOL031C	YJR056C	P47115	236 aa		3.1	□□□□□ -1.91
SIL1	YOL031C	YJR085C	P47131	105 aa	Known RBP	3.1	□□□□□ -1.91
SIL1	YOL031C	NBP35	P52920	328 aa		3.1	□□□□□ -1.91
SIL1	YOL031C	SWS2	P53937	143 aa		3.1	□□□□□ -1.91
SIL1	YOL031C	YLR152C	P54072	576 aa		3.1	□□□□□ -1.91
SIL1	YOL031C	PEX12	Q04370	399 aa		3.1	□□□□□ -1.91
SIL1	YOL031C	HRI1	Q05905	244 aa	Known RBP	3.1	□□□□□ -1.91
SIL1	YOL031C	DXO1	Q06349	442 aa		3.1	□□□□□ -1.91
SIL1	YOL031C	RRP40	Q08285	240 aa	Known RBP	3.1	□□□□□ -1.91
SIL1	YOL031C	MMT2	Q08970	484 aa		3.1	□□□□□ -1.91
SIL1	YOL031C	YPL150W	Q12152	901 aa		3.1	□□□□□ -1.91
SIL1	YOL031C	ERV2	Q12284	196 aa		3.1	□□□□□ -1.91
SIL1	YOL031C	IZH2	Q12442	317 aa		3.1	□□□□□ -1.91
SIL1	YOL031C	MON2	P48563	1636 aa	Predicted RBP	3.1	□□□□□ -1.91
SIL1	YOL031C	SIR4	P11978	1358 aa		3.1	□□□□□ -1.91
SIL1	YOL031C	ASP3-2	P0CX77	362 aa		3.09	□□□□□ -1.91
SIL1	YOL031C	ASP3-3	P0CX78	362 aa		3.09	□□□□□ -1.91
SIL1	YOL031C	ASP3-4	P0CX79	362 aa		3.09	□□□□□ -1.91
SIL1	YOL031C	ASP3-1	P0CZ17	362 aa		3.09	□□□□□ -1.91
SIL1	YOL031C	ZWF1	P11412	505 aa	Known RBP	3.09	□□□□□ -1.91
SIL1	YOL031C	YCR043C	P25361	127 aa		3.09	□□□□□ -1.91
SIL1	YOL031C	EHD3	P28817	500 aa		3.09	□□□□□ -1.91
SIL1	YOL031C	SEC1	P30619	724 aa	Known RBP	3.09	□□□□□ -1.91
SIL1	YOL031C	YKL075C	P36083	450 aa		3.09	□□□□□ -1.91
SIL1	YOL031C	YCR087C-A	P37263	153 aa		3.09	□□□□□ -1.91
SIL1	YOL031C	SSH1	P38353	490 aa	Known RBP	3.09	□□□□□ -1.91
SIL1	YOL031C	YHI9	P38765	294 aa		3.09	□□□□□ -1.91
SIL1	YOL031C	SEO1	P39709	593 aa		3.09	□□□□□ -1.91
SIL1	YOL031C	YIL067C	P40514	678 aa		3.09	□□□□□ -1.91
SIL1	YOL031C	YFL064C	P43540	174 aa		3.09	□□□□□ -1.91
SIL1	YOL031C	SNZ3	P43545	298 aa		3.09	□□□□□ -1.91
SIL1	YOL031C	CPR7	P47103	393 aa		3.09	□□□□□ -1.91
SIL1	YOL031C	ILM1	P47155	203 aa		3.09	□□□□□ -1.91
SIL1	YOL031C	YHC1	Q05900	231 aa	Known RBP	3.09	□□□□□ -1.91
SIL1	YOL031C	TPO4	Q12256	659 aa		3.09	□□□□□ -1.91
SIL1	YOL031C	YCL012C	Q8J0M4	134 aa		3.09	□□□□□ -1.91
SIL1	YOL031C	COX5A	P00424	153 aa		3.08	□□□□□ -1.92
SIL1	YOL031C	AAT2	P23542	418 aa	Known RBP	3.08	□□□□□ -1.92
SIL1	YOL031C	ARO2	P28777	376 aa	Known RBP	3.08	□□□□□ -1.92
SIL1	YOL031C	CAT2	P32796	670 aa	Known RBP	3.08	□□□□□ -1.92
SIL1	YOL031C	CSE2	P33308	149 aa		3.08	□□□□□ -1.92
SIL1	YOL031C	AME1	P38313	324 aa		3.08	□□□□□ -1.92
SIL1	YOL031C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	3.08	□□□□□ -1.92	not detected
SIL1	YOL031C	GOS1	P38736	223 aa		3.08	□□□□□ -1.92
SIL1	YOL031C	YER186C	P40101	306 aa		3.08	□□□□□ -1.92
SIL1	YOL031C	SER33	P40510	469 aa		3.08	□□□□□ -1.92
SIL1	YOL031C	YJR054W	P47114	497 aa		3.08	□□□□□ -1.92
SIL1	YOL031C	YGR015C	P53208	328 aa		3.08	□□□□□ -1.92
SIL1	YOL031C	TPC1	P53257	314 aa		3.08	□□□□□ -1.92
SIL1	YOL031C	PDR17	P53844	350 aa		3.08	□□□□□ -1.92
SIL1	YOL031C	RTC4	P53850	401 aa		3.08	□□□□□ -1.92
SIL1	YOL031C	SCS7	Q03529	384 aa		3.08	□□□□□ -1.92
SIL1	YOL031C	GOT1	Q03554	138 aa		3.08	□□□□□ -1.92
SIL1	YOL031C	YDR124W	Q04608	324 aa		3.08	□□□□□ -1.92
SIL1	YOL031C	LIP2	Q06005	328 aa		3.08	□□□□□ -1.92
SIL1	YOL031C	SEI1	Q06058	285 aa		3.08	□□□□□ -1.92
SIL1	YOL031C	COQ10	Q08058	207 aa		3.08	□□□□□ -1.92
SIL1	YOL031C	MDM32	Q12171	622 aa		3.08	□□□□□ -1.92
SIL1	YOL031C	WTM1	Q12363	437 aa	Known RBP	3.08	□□□□□ -1.92
SIL1	YOL031C	TUS1	Q06412	1307 aa		3.08	□□□□□ -1.92
SIL1	YOL031C	PUT1	P09368	476 aa		3.07	□□□□□ -1.92
SIL1	YOL031C	GCN3	P14741	305 aa		3.07	□□□□□ -1.92
SIL1	YOL031C	UBC6	P33296	250 aa	Predicted RBP	3.07	□□□□□ -1.92
SIL1	YOL031C	FIG1	P38224	298 aa		3.07	□□□□□ -1.92
SIL1	YOL031C	PHO89	P38361	574 aa		3.07	□□□□□ -1.92
SIL1	YOL031C	OXA1	P39952	402 aa		3.07	□□□□□ -1.92
SIL1	YOL031C	ATG18	P43601	500 aa		3.07	□□□□□ -1.92
SIL1	YOL031C	BXI1	P48558	297 aa		3.07	□□□□□ -1.92
SIL1	YOL031C	YIP3	P53633	176 aa		3.07	□□□□□ -1.92
SIL1	YOL031C	YMR166C	Q03829	368 aa		3.07	□□□□□ -1.92
SIL1	YOL031C	YLR036C	Q07986	203 aa		3.07	□□□□□ -1.92
SIL1	YOL031C	YDR018C	Q12185	396 aa		3.07	□□□□□ -1.92
SIL1	YOL031C	CKA2	P19454	339 aa		3.06	□□□□□ -1.92
SIL1	YOL031C	PSK1	P31374	1356 aa		3.06	□□□□□ -1.92
SIL1	YOL031C	KDX1	P36005	433 aa		3.06	□□□□□ -1.92
SIL1	YOL031C	GPX1	P36014	167 aa		3.06	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms