RNA–Protein interactions for RNA: YMR197C

VTI1, Transcript of Protein involved in cis-Golgi membrane traffic, yeastyeast

Gene VTI1, Length 654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VTI1YMR197C DPB2P24482 689 aaPredicted RBP1.83□□□□□ -2.12
VTI1YMR197C AEP1P32493 518 aa1.83□□□□□ -2.12
VTI1YMR197C CDC13P32797 924 aaKnown RBP1.83□□□□□ -2.12
VTI1YMR197C UBC6P33296 250 aaPredicted RBP1.83□□□□□ -2.12
VTI1YMR197C KDX1P36005 433 aa1.83□□□□□ -2.12
VTI1YMR197C MID2P36027 376 aa1.83□□□□□ -2.12
VTI1YMR197C YKL075CP36083 450 aa1.83□□□□□ -2.12
VTI1YMR197C CAF4P36130 643 aa1.83□□□□□ -2.12
VTI1YMR197C DRE2P36152 348 aa1.83□□□□□ -2.12
VTI1YMR197C YBR096WP38256 230 aa1.83□□□□□ -2.12
VTI1YMR197C FES1P38260 290 aa1.83□□□□□ -2.12
VTI1YMR197C MED8P38304 223 aa1.83□□□□□ -2.12
VTI1YMR197C SHG1P38337 142 aa1.83□□□□□ -2.12
VTI1YMR197C RCK1P38622 512 aa1.83□□□□□ -2.12
VTI1YMR197C YHR127WP38833 243 aaKnown RBP1.83□□□□□ -2.12
VTI1YMR197C CHL4P38907 458 aa1.83□□□□□ -2.12
VTI1YMR197C VAB2P40003 282 aa1.83□□□□□ -2.12
VTI1YMR197C KRE29P40026 464 aa1.83□□□□□ -2.12
VTI1YMR197C YNL208WP40159 199 aaKnown RBP1.83□□□□□ -2.12
VTI1YMR197C SER33P40510 469 aa1.83□□□□□ -2.12
VTI1YMR197C IRC18P47056 224 aa1.83□□□□□ -2.12
VTI1YMR197C TMA22P47089 198 aaPredicted RBP1.83□□□□□ -2.12
VTI1YMR197C YJR141WP47172 347 aaPredicted RBP1.83□□□□□ -2.12
VTI1YMR197C TRM9P49957 279 aa1.83□□□□□ -2.12
VTI1YMR197C SLX9P53251 210 aaPredicted RBP1.83□□□□□ -2.12
VTI1YMR197C RTC4P53850 401 aa1.83□□□□□ -2.12
VTI1YMR197C FYV6P53913 173 aa1.83□□□□□ -2.12
VTI1YMR197C SWS2P53937 143 aa1.83□□□□□ -2.12
VTI1YMR197C CTF19Q02732 369 aa1.83□□□□□ -2.12
VTI1YMR197C YMR166CQ03829 368 aa1.83□□□□□ -2.12
VTI1YMR197C YHC1Q05900 231 aaKnown RBP1.83□□□□□ -2.12
VTI1YMR197C RIF2Q06208 395 aa1.83□□□□□ -2.12
VTI1YMR197C RPN8Q08723 338 aaKnown RBP1.83□□□□□ -2.12
VTI1YMR197C ATP16Q12165 160 aa1.83□□□□□ -2.12
VTI1YMR197C RFM1Q12192 310 aa1.83□□□□□ -2.12
VTI1YMR197C MCT1Q12283 360 aa1.83□□□□□ -2.12
VTI1YMR197C TUS1Q06412 1307 aa1.83□□□□□ -2.12
VTI1YMR197C STE7P06784 515 aa1.82□□□□□ -2.12
VTI1YMR197C QCR2P07257 368 aa1.82□□□□□ -2.12
VTI1YMR197C RPS8AP0CX39 200 aaKnown RBP1.82□□□□□ -2.12
VTI1YMR197C RPS8BP0CX40 200 aaKnown RBP1.82□□□□□ -2.12
VTI1YMR197C RPL4AP10664 362 aaKnown RBP1.82□□□□□ -2.12
VTI1YMR197C SNA3P14359 133 aa1.82□□□□□ -2.12
VTI1YMR197C HSP26P15992 214 aaKnown RBP RIP-Chip data1.82□□□□□ -2.12not detected
VTI1YMR197C RPB5P20434 215 aa1.82□□□□□ -2.12
VTI1YMR197C EHD3P28817 500 aa1.82□□□□□ -2.12
VTI1YMR197C CAM1P29547 415 aaKnown RBP1.82□□□□□ -2.12
VTI1YMR197C ACP1P32463 125 aa1.82□□□□□ -2.12
VTI1YMR197C MRPL3P36516 390 aa1.82□□□□□ -2.12
VTI1YMR197C YCR087C-AP37263 153 aa1.82□□□□□ -2.12
VTI1YMR197C HEK2P38199 381 aaKnown RBP RIP-Chip data1.82□□□□□ -2.12 RIP-Chip
VTI1YMR197C GOS1P38736 223 aa1.82□□□□□ -2.12
VTI1YMR197C YFR057WP43625 151 aa1.82□□□□□ -2.12
VTI1YMR197C YJL016WP47072 561 aa1.82□□□□□ -2.12
VTI1YMR197C YJR085CP47131 105 aaKnown RBP1.82□□□□□ -2.12
VTI1YMR197C YJR149WP47177 404 aa1.82□□□□□ -2.12
VTI1YMR197C RPL4BP49626 362 aaKnown RBP1.82□□□□□ -2.12
VTI1YMR197C NBP35P52920 328 aa1.82□□□□□ -2.12
VTI1YMR197C BRR6P53062 197 aa1.82□□□□□ -2.12
VTI1YMR197C MMS2P53152 137 aa1.82□□□□□ -2.12
VTI1YMR197C TPC1P53257 314 aa1.82□□□□□ -2.12
VTI1YMR197C YIP3P53633 176 aa1.82□□□□□ -2.12
VTI1YMR197C YNR066CP53752 436 aa1.82□□□□□ -2.12
VTI1YMR197C CWC25P53854 179 aaKnown RBP1.82□□□□□ -2.12
VTI1YMR197C TPS1Q00764 495 aaKnown RBP1.82□□□□□ -2.12
VTI1YMR197C SCS7Q03529 384 aa1.82□□□□□ -2.12
VTI1YMR197C SPG4Q04438 115 aa1.82□□□□□ -2.12
VTI1YMR197C YPR147CQ06522 304 aaKnown RBP1.82□□□□□ -2.12
VTI1YMR197C MMT2Q08970 484 aa1.82□□□□□ -2.12
VTI1YMR197C YPL150WQ12152 901 aa1.82□□□□□ -2.12
VTI1YMR197C SFM1Q12314 213 aa1.82□□□□□ -2.12
VTI1YMR197C YKR104WP0CE69 306 aa1.81□□□□□ -2.12
VTI1YMR197C ZWF1P11412 505 aaKnown RBP1.81□□□□□ -2.12
VTI1YMR197C URA6P15700 204 aa1.81□□□□□ -2.12
VTI1YMR197C GIT1P25346 518 aa1.81□□□□□ -2.12
VTI1YMR197C TRR1P29509 319 aaKnown RBP1.81□□□□□ -2.12
VTI1YMR197C SPS18P32572 300 aa1.81□□□□□ -2.12
VTI1YMR197C GPX1P36014 167 aa1.81□□□□□ -2.12
VTI1YMR197C MRPL39P36533 70 aa1.81□□□□□ -2.12
VTI1YMR197C MAK5P38112 773 aaPredicted RBP1.81□□□□□ -2.12
VTI1YMR197C RFT1P38206 574 aaPredicted RBP1.81□□□□□ -2.12
VTI1YMR197C FIG1P38224 298 aa1.81□□□□□ -2.12
VTI1YMR197C YBR062CP38239 180 aa1.81□□□□□ -2.12
VTI1YMR197C AME1P38313 324 aa1.81□□□□□ -2.12
VTI1YMR197C SEN34P39707 275 aa1.81□□□□□ -2.12
VTI1YMR197C YMR144WP40214 342 aaKnown RBP1.81□□□□□ -2.12
VTI1YMR197C EGT2P42835 1041 aa1.81□□□□□ -2.12
VTI1YMR197C SNZ3P43545 298 aa1.81□□□□□ -2.12
VTI1YMR197C MCM22P47167 239 aa1.81□□□□□ -2.12
VTI1YMR197C GTR2P53290 341 aa1.81□□□□□ -2.12
VTI1YMR197C SNZ2P53824 298 aa1.81□□□□□ -2.12
VTI1YMR197C SEI1Q06058 285 aa1.81□□□□□ -2.12
VTI1YMR197C DXO1Q06349 442 aa1.81□□□□□ -2.12
VTI1YMR197C COQ10Q08058 207 aa1.81□□□□□ -2.12
VTI1YMR197C MIM1Q08176 113 aa1.81□□□□□ -2.12
VTI1YMR197C BRX1Q08235 291 aaKnown RBP1.81□□□□□ -2.12
VTI1YMR197C RRP40Q08285 240 aaKnown RBP1.81□□□□□ -2.12
VTI1YMR197C YNG1Q08465 219 aa1.81□□□□□ -2.12
VTI1YMR197C FDH1Q08911 376 aa1.81□□□□□ -2.12
VTI1YMR197C TPO4Q12256 659 aa1.81□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 35.8 ms