RNA–Protein interactions for RNA: YMR046C

YMR046C, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YMR046C, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR046CYMR046C AIM29P36154 155 aa2.45□□□□□ -2.02
YMR046CYMR046C TVP38P36164 337 aa2.45□□□□□ -2.02
YMR046CYMR046C SIP3P38717 1229 aa2.45□□□□□ -2.02
YMR046CYMR046C GAA1P39012 614 aa2.45□□□□□ -2.02
YMR046CYMR046C YIL054WP40524 105 aa2.45□□□□□ -2.02
YMR046CYMR046C TPN1P53099 579 aa2.45□□□□□ -2.02
YMR046CYMR046C CPD1P53314 239 aa2.45□□□□□ -2.02
YMR046CYMR046C PGA2P53903 129 aa2.45□□□□□ -2.02
YMR046CYMR046C YMR209CQ03648 457 aa2.45□□□□□ -2.02
YMR046CYMR046C YML018CQ03730 393 aa2.45□□□□□ -2.02
YMR046CYMR046C YMR244WQ04018 355 aa2.45□□□□□ -2.02
YMR046CYMR046C DPP1Q05521 289 aa2.45□□□□□ -2.02
YMR046CYMR046C ECM19Q06011 112 aa2.45□□□□□ -2.02
YMR046CYMR046C RRT8Q08219 342 aa2.45□□□□□ -2.02
YMR046CYMR046C YOR114WQ12219 294 aa2.45□□□□□ -2.02
YMR046CYMR046C COX2P00410 251 aa2.44□□□□□ -2.02
YMR046CYMR046C VPS1P21576 704 aaKnown RBP2.44□□□□□ -2.02
YMR046CYMR046C COX10P21592 462 aa2.44□□□□□ -2.02
YMR046CYMR046C DAL81P21657 970 aa2.44□□□□□ -2.02
YMR046CYMR046C ZIP1P31111 875 aa2.44□□□□□ -2.02
YMR046CYMR046C MRPL6P32904 214 aa2.44□□□□□ -2.02
YMR046CYMR046C FRM2P37261 193 aa2.44□□□□□ -2.02
YMR046CYMR046C SPT8P38915 602 aa2.44□□□□□ -2.02
YMR046CYMR046C SMC2P38989 1170 aaKnown RBP2.44□□□□□ -2.02
YMR046CYMR046C NPT1P39683 429 aaKnown RBP2.44□□□□□ -2.02
YMR046CYMR046C YFL064CP43540 174 aa2.44□□□□□ -2.02
YMR046CYMR046C YAR1P46683 200 aa2.44□□□□□ -2.02
YMR046CYMR046C RRN5Q02983 363 aa2.44□□□□□ -2.02
YMR046CYMR046C TAF9Q05027 157 aa2.44□□□□□ -2.02
YMR046CYMR046C SUE1Q06524 206 aa2.44□□□□□ -2.02
YMR046CYMR046C POX1P13711 748 aa2.43□□□□□ -2.02
YMR046CYMR046C MET16P18408 261 aaPredicted RBP2.43□□□□□ -2.02
YMR046CYMR046C RME1P32338 300 aaKnown RBP2.43□□□□□ -2.02
YMR046CYMR046C COT1P32798 439 aa2.43□□□□□ -2.02
YMR046CYMR046C RPT5P33297 434 aaKnown RBP2.43□□□□□ -2.02
YMR046CYMR046C CSE1P33307 960 aa2.43□□□□□ -2.02
YMR046CYMR046C MRPL3P36516 390 aa2.43□□□□□ -2.02
YMR046CYMR046C MBA1P38300 278 aa2.43□□□□□ -2.02
YMR046CYMR046C PRM9P39551 298 aa2.43□□□□□ -2.02
YMR046CYMR046C FRT2P39734 528 aa2.43□□□□□ -2.02
YMR046CYMR046C COA1P40452 197 aa2.43□□□□□ -2.02
YMR046CYMR046C FIS1P40515 155 aa2.43□□□□□ -2.02
YMR046CYMR046C IBA57P47158 497 aa2.43□□□□□ -2.02
YMR046CYMR046C YGL118CP53132 145 aa2.43□□□□□ -2.02
YMR046CYMR046C YNL040WP53960 456 aaPredicted RBP2.43□□□□□ -2.02
YMR046CYMR046C COX20Q04935 205 aa2.43□□□□□ -2.02
YMR046CYMR046C FUS2Q05670 677 aa2.43□□□□□ -2.02
YMR046CYMR046C GSC2P40989 1895 aa2.43□□□□□ -2.02
YMR046CYMR046C PET494P07390 489 aaPredicted RBP2.42□□□□□ -2.02
YMR046CYMR046C RSR1P13856 272 aa2.42□□□□□ -2.02
YMR046CYMR046C POL30P15873 258 aaKnown RBP2.42□□□□□ -2.02
YMR046CYMR046C FUS3P16892 353 aaKnown RBP2.42□□□□□ -2.02
YMR046CYMR046C RPB9P27999 122 aa2.42□□□□□ -2.02
YMR046CYMR046C COY1P34237 679 aa2.42□□□□□ -2.02
YMR046CYMR046C HSM3P38348 480 aa2.42□□□□□ -2.02
YMR046CYMR046C ASP1P38986 381 aaPredicted RBP2.42□□□□□ -2.02
YMR046CYMR046C EDC2P40023 145 aaPredicted RBP2.42□□□□□ -2.02
YMR046CYMR046C KRE29P40026 464 aa2.42□□□□□ -2.02
YMR046CYMR046C ACT1P60010 375 aaKnown RBP2.42□□□□□ -2.02
YMR046CYMR046C CWC21Q03375 135 aaKnown RBP2.42□□□□□ -2.02
YMR046CYMR046C MRX8Q05473 314 aa2.42□□□□□ -2.02
YMR046CYMR046C ARC18Q05933 178 aaKnown RBP2.42□□□□□ -2.02
YMR046CYMR046C SFH1Q06168 426 aa2.42□□□□□ -2.02
YMR046CYMR046C RLP24Q07915 199 aaKnown RBP2.42□□□□□ -2.02
YMR046CYMR046C YPL278CQ08990 100 aa2.42□□□□□ -2.02
YMR046CYMR046C RPS3P05750 240 aaKnown RBP2.42□□□□□ -2.02
YMR046CYMR046C MSF1P08425 469 aa2.42□□□□□ -2.02
YMR046CYMR046C BDH1P39714 382 aa2.42□□□□□ -2.02
YMR046CYMR046C DDI1P40087 428 aa2.42□□□□□ -2.02
YMR046CYMR046C YJL118WP47022 219 aa2.42□□□□□ -2.02
YMR046CYMR046C TAD2P47058 250 aa2.42□□□□□ -2.02
YMR046CYMR046C PRP24P49960 444 aaKnown RBP2.42□□□□□ -2.02
YMR046CYMR046C COG7P53195 279 aa2.42□□□□□ -2.02
YMR046CYMR046C CAX4P53223 239 aa2.42□□□□□ -2.02
YMR046CYMR046C YNL134CP53912 376 aaKnown RBP2.42□□□□□ -2.02
YMR046CYMR046C CDC14Q00684 551 aa2.42□□□□□ -2.02
YMR046CYMR046C VPS60Q03390 229 aa2.42□□□□□ -2.02
YMR046CYMR046C EBS1Q03466 884 aaKnown RBP2.42□□□□□ -2.02
YMR046CYMR046C YAL063C-AQ3E791 96 aa2.42□□□□□ -2.02
YMR046CYMR046C YAL064W-BO13512 126 aa2.41□□□□□ -2.02
YMR046CYMR046C YCR025CP25352 136 aa2.41□□□□□ -2.02
YMR046CYMR046C RRT12P25381 491 aa2.41□□□□□ -2.02
YMR046CYMR046C POF1P25576 258 aa2.41□□□□□ -2.02
YMR046CYMR046C ATG15P25641 520 aa2.41□□□□□ -2.02
YMR046CYMR046C IMP1P28627 190 aa2.41□□□□□ -2.02
YMR046CYMR046C PEX3P28795 441 aa2.41□□□□□ -2.02
YMR046CYMR046C TRR2P38816 342 aa2.41□□□□□ -2.02
YMR046CYMR046C NBP1P52919 319 aaPredicted RBP2.41□□□□□ -2.02
YMR046CYMR046C PEX31P53203 462 aa2.41□□□□□ -2.02
YMR046CYMR046C HST4P53688 370 aa2.41□□□□□ -2.02
YMR046CYMR046C MNT4P53745 580 aa2.41□□□□□ -2.02
YMR046CYMR046C NOP13P53883 403 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
YMR046CYMR046C ALG11P53954 548 aaKnown RBP2.41□□□□□ -2.02
YMR046CYMR046C TIM8P57744 87 aa2.41□□□□□ -2.02
YMR046CYMR046C SMD1Q02260 146 aaPredicted RBP2.41□□□□□ -2.02
YMR046CYMR046C YPL113CQ02961 396 aa2.41□□□□□ -2.02
YMR046CYMR046C ADH6Q04894 360 aaKnown RBP2.41□□□□□ -2.02
YMR046CYMR046C YMR321CQ04898 105 aa2.41□□□□□ -2.02
YMR046CYMR046C SEC10Q06245 871 aa2.41□□□□□ -2.02
YMR046CYMR046C YLR173WQ06247 608 aa2.41□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms