RNA–Protein interactions for RNA: YMR039C

SUB1, Transcript of Transcriptional coactivator, yeastyeast

Gene SUB1, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB1YMR039C YCT1Q12235 531 aa2.49□□□□□ -2.01
SUB1YMR039C CDC33P07260 213 aaKnown RBP2.48□□□□□ -2.01
SUB1YMR039C YBR121C-AP0C5L4 52 aa2.48□□□□□ -2.01
SUB1YMR039C TCP1P12612 559 aaKnown RBP2.48□□□□□ -2.01
SUB1YMR039C CKA2P19454 339 aa2.48□□□□□ -2.01
SUB1YMR039C CAM1P29547 415 aaKnown RBP2.48□□□□□ -2.01
SUB1YMR039C PRP18P33411 251 aaPredicted RBP2.48□□□□□ -2.01
SUB1YMR039C AST1P35183 429 aa2.48□□□□□ -2.01
SUB1YMR039C RIB1P38066 345 aa2.48□□□□□ -2.01
SUB1YMR039C MBA1P38300 278 aa2.48□□□□□ -2.01
SUB1YMR039C MED8P38304 223 aa2.48□□□□□ -2.01
SUB1YMR039C CUE1P38428 203 aa2.48□□□□□ -2.01
SUB1YMR039C KRE29P40026 464 aa2.48□□□□□ -2.01
SUB1YMR039C PRE6P40303 254 aaKnown RBP2.48□□□□□ -2.01
SUB1YMR039C SER33P40510 469 aa2.48□□□□□ -2.01
SUB1YMR039C YFL064CP43540 174 aa2.48□□□□□ -2.01
SUB1YMR039C MIC19P43594 170 aa2.48□□□□□ -2.01
SUB1YMR039C HAM1P47119 197 aaKnown RBP2.48□□□□□ -2.01
SUB1YMR039C NBP35P52920 328 aa2.48□□□□□ -2.01
SUB1YMR039C YNL095CP53932 642 aa2.48□□□□□ -2.01
SUB1YMR039C YPR098CQ06089 161 aa2.48□□□□□ -2.01
SUB1YMR039C TRM10Q12400 293 aa2.48□□□□□ -2.01
SUB1YMR039C YAL067W-AQ8TGK6 75 aa2.48□□□□□ -2.01
SUB1YMR039C YMR316C-AI2HB70 103 aa2.47□□□□□ -2.01
SUB1YMR039C RPL4AP10664 362 aaKnown RBP2.47□□□□□ -2.01
SUB1YMR039C YPK2P18961 677 aa2.47□□□□□ -2.01
SUB1YMR039C YMR31P19955 123 aa2.47□□□□□ -2.01
SUB1YMR039C YCR102CP25608 368 aa2.47□□□□□ -2.01
SUB1YMR039C ASF2P32448 525 aaPredicted RBP2.47□□□□□ -2.01
SUB1YMR039C MGM101P32787 269 aaKnown RBP2.47□□□□□ -2.01
SUB1YMR039C SSO1P32867 290 aa2.47□□□□□ -2.01
SUB1YMR039C YBR062CP38239 180 aa2.47□□□□□ -2.01
SUB1YMR039C MIC12P38341 106 aa2.47□□□□□ -2.01
SUB1YMR039C RTC3P38804 111 aaPredicted RBP2.47□□□□□ -2.01
SUB1YMR039C SEN34P39707 275 aa2.47□□□□□ -2.01
SUB1YMR039C YRB2P40517 327 aa2.47□□□□□ -2.01
SUB1YMR039C RPL4BP49626 362 aaKnown RBP2.47□□□□□ -2.01
SUB1YMR039C PRP24P49960 444 aaKnown RBP2.47□□□□□ -2.01
SUB1YMR039C HOP2P53187 214 aa2.47□□□□□ -2.01
SUB1YMR039C CUS2P53830 285 aaPredicted RBP2.47□□□□□ -2.01
SUB1YMR039C SNZ1Q03148 297 aa2.47□□□□□ -2.01
SUB1YMR039C API2Q04413 109 aa2.47□□□□□ -2.01
SUB1YMR039C DXO1Q06349 442 aa2.47□□□□□ -2.01
SUB1YMR039C DIB1Q06819 143 aaPredicted RBP2.47□□□□□ -2.01
SUB1YMR039C YDR018CQ12185 396 aa2.47□□□□□ -2.01
SUB1YMR039C YPL119C-AQ3E751 87 aa2.47□□□□□ -2.01
SUB1YMR039C AI5_BETAQ9ZZX0 354 aa2.47□□□□□ -2.01
SUB1YMR039C POX1P13711 748 aa2.46□□□□□ -2.02
SUB1YMR039C ATG15P25641 520 aa2.46□□□□□ -2.02
SUB1YMR039C JEN1P36035 616 aa2.46□□□□□ -2.02
SUB1YMR039C YHI9P38765 294 aa2.46□□□□□ -2.02
SUB1YMR039C ERG28P40030 148 aa2.46□□□□□ -2.02
SUB1YMR039C UFE1P41834 346 aa2.46□□□□□ -2.02
SUB1YMR039C MIC26P50087 233 aa2.46□□□□□ -2.02
SUB1YMR039C NSA1P53136 463 aaPredicted RBP2.46□□□□□ -2.02
SUB1YMR039C SLX9P53251 210 aaPredicted RBP2.46□□□□□ -2.02
SUB1YMR039C SDC1Q03323 175 aa2.46□□□□□ -2.02
SUB1YMR039C ARC18Q05933 178 aaKnown RBP2.46□□□□□ -2.02
SUB1YMR039C YOL029CQ08187 201 aa2.46□□□□□ -2.02
SUB1YMR039C RRS1Q08746 203 aaKnown RBP2.46□□□□□ -2.02
SUB1YMR039C YKL183C-AQ3E765 70 aa2.46□□□□□ -2.02
SUB1YMR039C FLO11P08640 1367 aa2.46□□□□□ -2.02
SUB1YMR039C OSM1P21375 501 aaKnown RBP2.45□□□□□ -2.02
SUB1YMR039C DPB2P24482 689 aaPredicted RBP2.45□□□□□ -2.02
SUB1YMR039C IMP1P28627 190 aa2.45□□□□□ -2.02
SUB1YMR039C CAT2P32796 670 aaKnown RBP2.45□□□□□ -2.02
SUB1YMR039C CBT1P36038 271 aaPredicted RBP2.45□□□□□ -2.02
SUB1YMR039C YKL075CP36083 450 aa2.45□□□□□ -2.02
SUB1YMR039C HEK2P38199 381 aaKnown RBP RIP-Chip data2.45□□□□□ -2.02 RIP-Chip
SUB1YMR039C URA8P38627 578 aaPredicted RBP2.45□□□□□ -2.02
SUB1YMR039C RRG9P40156 214 aa2.45□□□□□ -2.02
SUB1YMR039C YIL054WP40524 105 aa2.45□□□□□ -2.02
SUB1YMR039C FMP48P53233 369 aa2.45□□□□□ -2.02
SUB1YMR039C RHO3Q00245 231 aaKnown RBP2.45□□□□□ -2.02
SUB1YMR039C YPL113CQ02961 396 aa2.45□□□□□ -2.02
SUB1YMR039C PEX10Q05568 337 aa2.45□□□□□ -2.02
SUB1YMR039C YDL144CQ07589 356 aa2.45□□□□□ -2.02
SUB1YMR039C YPL278CQ08990 100 aa2.45□□□□□ -2.02
SUB1YMR039C SPT3P06844 337 aa2.44□□□□□ -2.02
SUB1YMR039C YKR104WP0CE69 306 aa2.44□□□□□ -2.02
SUB1YMR039C SGE1P33335 543 aa2.44□□□□□ -2.02
SUB1YMR039C YNL194CP40169 301 aa2.44□□□□□ -2.02
SUB1YMR039C AVT7P40501 490 aa2.44□□□□□ -2.02
SUB1YMR039C COS4P43542 379 aa2.44□□□□□ -2.02
SUB1YMR039C CWC23P52868 283 aaPredicted RBP2.44□□□□□ -2.02
SUB1YMR039C INP1Q03694 420 aa2.44□□□□□ -2.02
SUB1YMR039C YMR166CQ03829 368 aa2.44□□□□□ -2.02
SUB1YMR039C UTP15Q04305 513 aaKnown RBP2.44□□□□□ -2.02
SUB1YMR039C SPG4Q04438 115 aa2.44□□□□□ -2.02
SUB1YMR039C LOA1Q06508 300 aa2.44□□□□□ -2.02
SUB1YMR039C YPR147CQ06522 304 aaKnown RBP2.44□□□□□ -2.02
SUB1YMR039C COQ10Q08058 207 aa2.44□□□□□ -2.02
SUB1YMR039C PLB3Q08108 686 aa2.44□□□□□ -2.02
SUB1YMR039C RRP40Q08285 240 aaKnown RBP2.44□□□□□ -2.02
SUB1YMR039C DCN1Q12395 269 aa2.44□□□□□ -2.02
SUB1YMR039C IKI3Q06706 1349 aaKnown RBP2.43□□□□□ -2.02
SUB1YMR039C BCY1P07278 416 aaKnown RBP2.43□□□□□ -2.02
SUB1YMR039C RPL27AP0C2H6 136 aaKnown RBP2.43□□□□□ -2.02
SUB1YMR039C RPL27BP0C2H7 136 aaKnown RBP2.43□□□□□ -2.02
SUB1YMR039C GDH2P33327 1092 aaKnown RBP2.43□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 127 ms