RNA–Protein interactions for RNA: YLR260W

LCB5, Transcript of Minor sphingoid long-chain base kinase, yeastyeast

Gene LCB5, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB5YLR260W FUN19P28003 413 aaPredicted RBP3.19□□□□□ -1.9
LCB5YLR260W NUP2P32499 720 aa3.19□□□□□ -1.9
LCB5YLR260W SDH3P33421 198 aa3.19□□□□□ -1.9
LCB5YLR260W TRM7P38238 310 aaKnown RBP3.19□□□□□ -1.9
LCB5YLR260W PRS2P38620 318 aaKnown RBP3.19□□□□□ -1.9
LCB5YLR260W ISC1P40015 477 aaKnown RBP3.19□□□□□ -1.9
LCB5YLR260W COX15P40086 486 aa3.19□□□□□ -1.9
LCB5YLR260W BMT5P40493 336 aa3.19□□□□□ -1.9
LCB5YLR260W TRS85P46944 698 aa3.19□□□□□ -1.9
LCB5YLR260W ADO1P47143 340 aaKnown RBP3.19□□□□□ -1.9
LCB5YLR260W JHD2P47156 728 aaPredicted RBP3.19□□□□□ -1.9
LCB5YLR260W SBH2P52871 88 aa3.19□□□□□ -1.9
LCB5YLR260W YLR460CP54007 376 aa3.19□□□□□ -1.9
LCB5YLR260W SNO1Q03144 224 aa3.19□□□□□ -1.9
LCB5YLR260W YDR387CQ04162 555 aa3.19□□□□□ -1.9
LCB5YLR260W DIC1Q06143 298 aa3.19□□□□□ -1.9
LCB5YLR260W YLR030WQ07967 263 aa3.19□□□□□ -1.9
LCB5YLR260W MES1P00958 751 aaKnown RBP3.18□□□□□ -1.9
LCB5YLR260W GPA2P10823 449 aa3.18□□□□□ -1.9
LCB5YLR260W TYR1P20049 452 aa3.18□□□□□ -1.9
LCB5YLR260W EHD3P28817 500 aa3.18□□□□□ -1.9
LCB5YLR260W MRPL6P32904 214 aa3.18□□□□□ -1.9
LCB5YLR260W SFC1P33303 322 aa3.18□□□□□ -1.9
LCB5YLR260W MCH2P36032 473 aa3.18□□□□□ -1.9
LCB5YLR260W RIB5P38145 238 aa3.18□□□□□ -1.9
LCB5YLR260W ECM8P38246 354 aa3.18□□□□□ -1.9
LCB5YLR260W DER1P38307 211 aa3.18□□□□□ -1.9
LCB5YLR260W FMP52P40008 231 aa3.18□□□□□ -1.9
LCB5YLR260W SHO1P40073 367 aa3.18□□□□□ -1.9
LCB5YLR260W DDI1P40087 428 aa3.18□□□□□ -1.9
LCB5YLR260W MIC19P43594 170 aa3.18□□□□□ -1.9
LCB5YLR260W SFH5P47008 294 aa3.18□□□□□ -1.9
LCB5YLR260W TAD2P47058 250 aa3.18□□□□□ -1.9
LCB5YLR260W YGR015CP53208 328 aa3.18□□□□□ -1.9
LCB5YLR260W MAL13P53338 473 aa3.18□□□□□ -1.9
LCB5YLR260W ASI1P54074 624 aa3.18□□□□□ -1.9
LCB5YLR260W CSN9Q03981 162 aa3.18□□□□□ -1.9
LCB5YLR260W VBA1Q04301 562 aa3.18□□□□□ -1.9
LCB5YLR260W PLM2Q04383 521 aa3.18□□□□□ -1.9
LCB5YLR260W MRPL51Q06090 140 aaPredicted RBP3.18□□□□□ -1.9
LCB5YLR260W YOL019WQ08157 551 aa3.18□□□□□ -1.9
LCB5YLR260W THP3Q12049 470 aaKnown RBP3.18□□□□□ -1.9
LCB5YLR260W MLH3Q12083 715 aa3.18□□□□□ -1.9
LCB5YLR260W APC9Q12107 265 aa3.18□□□□□ -1.9
LCB5YLR260W HMS1Q12398 434 aa3.18□□□□□ -1.9
LCB5YLR260W HTZ1Q12692 134 aaKnown RBP3.18□□□□□ -1.9
LCB5YLR260W SLH1P53327 1967 aaKnown RBP3.18□□□□□ -1.9
LCB5YLR260W ARF1P11076 181 aaKnown RBP3.18□□□□□ -1.9
LCB5YLR260W URA6P15700 204 aa3.18□□□□□ -1.9
LCB5YLR260W TRR1P29509 319 aaKnown RBP3.18□□□□□ -1.9
LCB5YLR260W VAM7P32912 316 aa3.18□□□□□ -1.9
LCB5YLR260W MET30P39014 640 aa3.18□□□□□ -1.9
LCB5YLR260W NPT1P39683 429 aaKnown RBP3.18□□□□□ -1.9
LCB5YLR260W SMX2P40204 77 aaKnown RBP3.18□□□□□ -1.9
LCB5YLR260W LAS21P40367 830 aa3.18□□□□□ -1.9
LCB5YLR260W YJR141WP47172 347 aaPredicted RBP3.18□□□□□ -1.9
LCB5YLR260W MGA1P53050 456 aa3.18□□□□□ -1.9
LCB5YLR260W CLD1P53264 445 aa3.18□□□□□ -1.9
LCB5YLR260W DUG3P53871 357 aa3.18□□□□□ -1.9
LCB5YLR260W YDR209CQ03480 137 aa3.18□□□□□ -1.9
LCB5YLR260W MSS11Q03825 758 aa3.18□□□□□ -1.9
LCB5YLR260W RIF2Q06208 395 aa3.18□□□□□ -1.9
LCB5YLR260W ENB1Q08299 606 aa3.18□□□□□ -1.9
LCB5YLR260W YOR114WQ12219 294 aa3.18□□□□□ -1.9
LCB5YLR260W SIR3P06701 978 aa3.17□□□□□ -1.9
LCB5YLR260W GCY1P14065 312 aaKnown RBP RIP-Chip data3.17□□□□□ -1.9not detected
LCB5YLR260W RNA15P25299 296 aaPredicted RBP3.17□□□□□ -1.9
LCB5YLR260W YCR102CP25608 368 aa3.17□□□□□ -1.9
LCB5YLR260W BUD23P25627 275 aaPredicted RBP3.17□□□□□ -1.9
LCB5YLR260W ITR2P30606 609 aa3.17□□□□□ -1.9
LCB5YLR260W ATO2P32907 282 aa3.17□□□□□ -1.9
LCB5YLR260W ECM15P35195 104 aa3.17□□□□□ -1.9
LCB5YLR260W GGC1P38988 300 aa3.17□□□□□ -1.9
LCB5YLR260W PEP8P40335 379 aa3.17□□□□□ -1.9
LCB5YLR260W YIL086CP40503 102 aa3.17□□□□□ -1.9
LCB5YLR260W RPL10P41805 221 aaKnown RBP3.17□□□□□ -1.9
LCB5YLR260W NSA1P53136 463 aaPredicted RBP3.17□□□□□ -1.9
LCB5YLR260W SHY1P53266 389 aa3.17□□□□□ -1.9
LCB5YLR260W RAD34Q06665 692 aa3.17□□□□□ -1.9
LCB5YLR260W YDL086WQ07505 273 aa3.17□□□□□ -1.9
LCB5YLR260W RFU1Q08003 200 aa3.17□□□□□ -1.9
LCB5YLR260W YLR053CQ12026 108 aa3.17□□□□□ -1.9
LCB5YLR260W ATG34Q12292 412 aa3.17□□□□□ -1.9
LCB5YLR260W JLP1Q12358 412 aa3.17□□□□□ -1.9
LCB5YLR260W BCY1P07278 416 aaKnown RBP3.16□□□□□ -1.9
LCB5YLR260W CPT1P17898 393 aa3.16□□□□□ -1.9
LCB5YLR260W BUB3P26449 341 aa3.16□□□□□ -1.9
LCB5YLR260W TOA2P32774 122 aa3.16□□□□□ -1.9
LCB5YLR260W CLG1P35190 452 aa3.16□□□□□ -1.9
LCB5YLR260W ASK1P35734 292 aa3.16□□□□□ -1.9
LCB5YLR260W IST2P38250 946 aa3.16□□□□□ -1.9
LCB5YLR260W PHO90P39535 881 aa3.16□□□□□ -1.9
LCB5YLR260W CIN2P46670 268 aa3.16□□□□□ -1.9
LCB5YLR260W IKS1P47042 667 aa3.16□□□□□ -1.9
LCB5YLR260W BUL1P48524 976 aa3.16□□□□□ -1.9
LCB5YLR260W UBC11P52492 156 aa3.16□□□□□ -1.9
LCB5YLR260W AIF1P52923 378 aa3.16□□□□□ -1.9
LCB5YLR260W ALG13P53178 202 aa3.16□□□□□ -1.9
LCB5YLR260W CPD1P53314 239 aa3.16□□□□□ -1.9
LCB5YLR260W YNR066CP53752 436 aa3.16□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms