RNA–Protein interactions for RNA: YKR037C

SPC34, Transcript of Essential subunit of the Dam1 complex (aka DASH complex), yeast

Gene SPC34, Length 888 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPC34	YKR037C	CDH1	P53197	566 aa		4.09	□□□□□ -1.75
SPC34	YKR037C	ATC1	Q04005	294 aa		4.09	□□□□□ -1.75
SPC34	YKR037C	SNX41	Q04053	625 aa		4.09	□□□□□ -1.75
SPC34	YKR037C	Q0297	Q9ZZV8	51 aa		4.09	□□□□□ -1.75
SPC34	YKR037C	RPL24A	P04449	155 aa	Known RBP	4.08	□□□□□ -1.76
SPC34	YKR037C	UNG1	P12887	359 aa		4.08	□□□□□ -1.76
SPC34	YKR037C	ERD1	P16151	362 aa		4.08	□□□□□ -1.76
SPC34	YKR037C	EPT1	P22140	391 aa		4.08	□□□□□ -1.76
SPC34	YKR037C	CMK2	P22517	447 aa		4.08	□□□□□ -1.76
SPC34	YKR037C	CDC50	P25656	391 aa		4.08	□□□□□ -1.76
SPC34	YKR037C	URA10	P30402	227 aa		4.08	□□□□□ -1.76
SPC34	YKR037C	NUP2	P32499	720 aa		4.08	□□□□□ -1.76
SPC34	YKR037C	PRM9	P39551	298 aa		4.08	□□□□□ -1.76
SPC34	YKR037C	SCC4	P40090	624 aa		4.08	□□□□□ -1.76
SPC34	YKR037C	SLM1	P40485	686 aa		4.08	□□□□□ -1.76
SPC34	YKR037C	CUP9	P41817	306 aa		4.08	□□□□□ -1.76
SPC34	YKR037C	AGP3	P43548	558 aa		4.08	□□□□□ -1.76
SPC34	YKR037C	FMP33	P46998	180 aa		4.08	□□□□□ -1.76
SPC34	YKR037C	JHD2	P47156	728 aa	Predicted RBP	4.08	□□□□□ -1.76
SPC34	YKR037C	SPP2	Q02521	185 aa		4.08	□□□□□ -1.76
SPC34	YKR037C	ENT5	Q03769	411 aa	Known RBP	4.08	□□□□□ -1.76
SPC34	YKR037C	YLR177W	Q06251	628 aa		4.08	□□□□□ -1.76
SPC34	YKR037C	BER1	Q06688	274 aa	Known RBP	4.08	□□□□□ -1.76
SPC34	YKR037C	UTP23	Q12339	254 aa	Known RBP	4.08	□□□□□ -1.76
SPC34	YKR037C	IZH4	Q99393	312 aa		4.08	□□□□□ -1.76
SPC34	YKR037C	CCW14	O13547	238 aa		4.07	□□□□□ -1.76
SPC34	YKR037C	STE7	P06784	515 aa		4.07	□□□□□ -1.76
SPC34	YKR037C	YSR3	P23501	404 aa		4.07	□□□□□ -1.76
SPC34	YKR037C	YBR241C	P38142	488 aa		4.07	□□□□□ -1.76
SPC34	YKR037C	TRM7	P38238	310 aa	Known RBP	4.07	□□□□□ -1.76
SPC34	YKR037C	TDA11	P38854	504 aa		4.07	□□□□□ -1.76
SPC34	YKR037C	CYC2	P38909	366 aa		4.07	□□□□□ -1.76
SPC34	YKR037C	UTP18	P40362	594 aa	Predicted RBP	4.07	□□□□□ -1.76
SPC34	YKR037C	GAB1	P41733	394 aa		4.07	□□□□□ -1.76
SPC34	YKR037C	MRX5	P47007	382 aa		4.07	□□□□□ -1.76
SPC34	YKR037C	ASR1	Q06834	288 aa		4.07	□□□□□ -1.76
SPC34	YKR037C	YDR018C	Q12185	396 aa		4.07	□□□□□ -1.76
SPC34	YKR037C	YOL107W	Q12239	342 aa		4.07	□□□□□ -1.76
SPC34	YKR037C	WTM1	Q12363	437 aa	Known RBP	4.07	□□□□□ -1.76
SPC34	YKR037C	TDH1	P00360	332 aa	Known RBP	4.06	□□□□□ -1.76
SPC34	YKR037C	COX5A	P00424	153 aa		4.06	□□□□□ -1.76
SPC34	YKR037C	ZRC1	P20107	442 aa		4.06	□□□□□ -1.76
SPC34	YKR037C	DEP1	P31385	405 aa		4.06	□□□□□ -1.76
SPC34	YKR037C	YKL071W	P36086	256 aa		4.06	□□□□□ -1.76
SPC34	YKR037C	OM14	P38325	134 aa		4.06	□□□□□ -1.76
SPC34	YKR037C	PET100	P38958	111 aa		4.06	□□□□□ -1.76
SPC34	YKR037C	PEX31	P53203	462 aa		4.06	□□□□□ -1.76
SPC34	YKR037C	MRS2	Q01926	470 aa		4.06	□□□□□ -1.76
SPC34	YKR037C	RNH1	Q04740	348 aa		4.06	□□□□□ -1.76
SPC34	YKR037C	MRX9	Q07349	420 aa	Known RBP	4.06	□□□□□ -1.76
SPC34	YKR037C	PRB1	P09232	635 aa		4.05	□□□□□ -1.76
SPC34	YKR037C	RPL16B	P26785	198 aa	Known RBP	4.05	□□□□□ -1.76
SPC34	YKR037C	PDC2	P32896	925 aa		4.05	□□□□□ -1.76
SPC34	YKR037C	RPT5	P33297	434 aa	Known RBP	4.05	□□□□□ -1.76
SPC34	YKR037C	BIO3	P50277	480 aa		4.05	□□□□□ -1.76
SPC34	YKR037C	YPL077C	Q02831	240 aa		4.05	□□□□□ -1.76
SPC34	YKR037C	YDR115W	Q04598	105 aa		4.05	□□□□□ -1.76
SPC34	YKR037C	GRX8	Q05926	109 aa		4.05	□□□□□ -1.76
SPC34	YKR037C	GPN3	Q06543	272 aa		4.05	□□□□□ -1.76
SPC34	YKR037C	PRM4	Q12498	284 aa		4.05	□□□□□ -1.76
SPC34	YKR037C	RPL21B	Q12672	160 aa	Known RBP	4.05	□□□□□ -1.76
SPC34	YKR037C	ATP6	P00854	259 aa		4.04	□□□□□ -1.76
SPC34	YKR037C	CPA1	P07258	411 aa	Known RBP	4.04	□□□□□ -1.76
SPC34	YKR037C	RPL31A	P0C2H8	113 aa	Known RBP	4.04	□□□□□ -1.76
SPC34	YKR037C	INO2	P26798	304 aa		4.04	□□□□□ -1.76
SPC34	YKR037C	YKL102C	P34249	101 aa		4.04	□□□□□ -1.76
SPC34	YKR037C	YKL063C	P35725	167 aa		4.04	□□□□□ -1.76
SPC34	YKR037C	CHL4	P38907	458 aa		4.04	□□□□□ -1.76
SPC34	YKR037C	SOP4	P39543	234 aa	Predicted RBP	4.04	□□□□□ -1.76
SPC34	YKR037C	IGD1	P43598	195 aa		4.04	□□□□□ -1.76
SPC34	YKR037C	IBA57	P47158	497 aa		4.04	□□□□□ -1.76
SPC34	YKR037C	YGR015C	P53208	328 aa		4.04	□□□□□ -1.76
SPC34	YKR037C	RNH201	P53942	307 aa		4.04	□□□□□ -1.76
SPC34	YKR037C	DTD1	Q07648	150 aa	Known RBP	4.04	□□□□□ -1.76
SPC34	YKR037C	POM33	Q12164	279 aa		4.04	□□□□□ -1.76
SPC34	YKR037C	RBD2	Q12270	262 aa		4.04	□□□□□ -1.76
SPC34	YKR037C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
SPC34	YKR037C	RSR1	P13856	272 aa		4.03	□□□□□ -1.76
SPC34	YKR037C	SPS19	P32573	292 aa	Known RBP	4.03	□□□□□ -1.76
SPC34	YKR037C	MCH2	P36032	473 aa		4.03	□□□□□ -1.76
SPC34	YKR037C	YEL075C	P39972	122 aa		4.03	□□□□□ -1.76
SPC34	YKR037C	STB1	P42845	420 aa		4.03	□□□□□ -1.76
SPC34	YKR037C	YJL118W	P47022	219 aa		4.03	□□□□□ -1.76
SPC34	YKR037C	TPC1	P53257	314 aa		4.03	□□□□□ -1.76
SPC34	YKR037C	SCS7	Q03529	384 aa		4.03	□□□□□ -1.76
SPC34	YKR037C	PAL1	Q05518	499 aa	Known RBP	4.03	□□□□□ -1.76
SPC34	YKR037C	YOR376W	Q08900	122 aa		4.03	□□□□□ -1.76
SPC34	YKR037C	MDM32	Q12171	622 aa		4.03	□□□□□ -1.76
SPC34	YKR037C	RRP42	Q12277	265 aa	Predicted RBP	4.03	□□□□□ -1.76
SPC34	YKR037C	YEL045C	P32616	141 aa		4.02	□□□□□ -1.77
SPC34	YKR037C	IES6	P32617	166 aa		4.02	□□□□□ -1.77
SPC34	YKR037C	GCG1	P32656	232 aa	Known RBP	4.02	□□□□□ -1.77
SPC34	YKR037C	RPC37	P36121	282 aa		4.02	□□□□□ -1.77
SPC34	YKR037C	BMT2	P38278	337 aa		4.02	□□□□□ -1.77
SPC34	YKR037C	YPC1	P38298	316 aa		4.02	□□□□□ -1.77
SPC34	YKR037C	PET8	P38921	284 aa		4.02	□□□□□ -1.77
SPC34	YKR037C	YEL073C	P39974	107 aa		4.02	□□□□□ -1.77
SPC34	YKR037C	YIA6	P40556	373 aa		4.02	□□□□□ -1.77
SPC34	YKR037C	HOP2	P53187	214 aa		4.02	□□□□□ -1.77
SPC34	YKR037C	GMC2	Q06201	188 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 61.6 ms