RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W YDR387CQ04162 555 aa5.91□□□□□ -1.46
NUP49YGL172W HLR1Q04429 423 aa5.91□□□□□ -1.46
NUP49YGL172W ALG6Q12001 544 aaKnown RBP5.91□□□□□ -1.46
NUP49YGL172W IES3Q12345 250 aa5.91□□□□□ -1.46
NUP49YGL172W NOP56Q12460 504 aaKnown RBP RIP-Chip data5.91□□□□□ -1.46not detected
NUP49YGL172W YLR099W-AQ3E798 87 aa5.91□□□□□ -1.46
NUP49YGL172W RPL35AP0CX84 120 aaKnown RBP5.9□□□□□ -1.47
NUP49YGL172W RPL35BP0CX85 120 aaKnown RBP5.9□□□□□ -1.47
NUP49YGL172W TAL1P15019 335 aaKnown RBP5.9□□□□□ -1.47
NUP49YGL172W RPI1P23250 407 aaKnown RBP5.9□□□□□ -1.47
NUP49YGL172W PRE7P23724 241 aaKnown RBP5.9□□□□□ -1.47
NUP49YGL172W ERG4P25340 473 aa5.9□□□□□ -1.47
NUP49YGL172W YER084WP40057 128 aa5.9□□□□□ -1.47
NUP49YGL172W YFL051CP43552 160 aa5.9□□□□□ -1.47
NUP49YGL172W YJL055WP47044 245 aa5.9□□□□□ -1.47
NUP49YGL172W LOH1P47055 219 aa5.9□□□□□ -1.47
NUP49YGL172W YAE1P47118 141 aaPredicted RBP5.9□□□□□ -1.47
NUP49YGL172W SAM50P53969 484 aa5.9□□□□□ -1.47
NUP49YGL172W RPL6AQ02326 176 aaKnown RBP5.9□□□□□ -1.47
NUP49YGL172W GRX3Q03835 250 aa5.9□□□□□ -1.47
NUP49YGL172W TSR2Q06672 205 aaKnown RBP5.9□□□□□ -1.47
NUP49YGL172W MCM21Q06675 368 aa5.9□□□□□ -1.47
NUP49YGL172W BRE4Q07660 1125 aa5.9□□□□□ -1.47
NUP49YGL172W THI72Q08579 599 aa5.9□□□□□ -1.47
NUP49YGL172W IZH2Q12442 317 aa5.9□□□□□ -1.47
NUP49YGL172W COX5BP00425 151 aa5.89□□□□□ -1.47
NUP49YGL172W SIR2P06700 562 aa5.89□□□□□ -1.47
NUP49YGL172W MRP1P10662 321 aaKnown RBP5.89□□□□□ -1.47
NUP49YGL172W DPB2P24482 689 aaPredicted RBP5.89□□□□□ -1.47
NUP49YGL172W DOA4P32571 926 aa5.89□□□□□ -1.47
NUP49YGL172W MTH1P35198 433 aa5.89□□□□□ -1.47
NUP49YGL172W FRM2P37261 193 aa5.89□□□□□ -1.47
NUP49YGL172W OSH7P38755 437 aa5.89□□□□□ -1.47
NUP49YGL172W YJL218WP40892 196 aaKnown RBP5.89□□□□□ -1.47
NUP49YGL172W SRB7P47822 140 aa5.89□□□□□ -1.47
NUP49YGL172W PXR1P53335 271 aaPredicted RBP5.89□□□□□ -1.47
NUP49YGL172W DIG2Q03373 323 aaKnown RBP5.89□□□□□ -1.47
NUP49YGL172W RRP17Q04031 235 aaPredicted RBP5.89□□□□□ -1.47
NUP49YGL172W GAL83Q04739 417 aa5.89□□□□□ -1.47
NUP49YGL172W NMA1Q06178 401 aaKnown RBP5.89□□□□□ -1.47
NUP49YGL172W SSK1Q07084 712 aa5.89□□□□□ -1.47
NUP49YGL172W SOD2P00447 233 aa5.88□□□□□ -1.47
NUP49YGL172W CDC31P06704 161 aaKnown RBP5.88□□□□□ -1.47
NUP49YGL172W ADK1P07170 222 aaKnown RBP5.88□□□□□ -1.47
NUP49YGL172W COX9P07255 59 aa5.88□□□□□ -1.47
NUP49YGL172W RSM22P36056 628 aa5.88□□□□□ -1.47
NUP49YGL172W FMP23P38231 175 aa5.88□□□□□ -1.47
NUP49YGL172W YBR096WP38256 230 aa5.88□□□□□ -1.47
NUP49YGL172W YHL037CP38733 133 aa5.88□□□□□ -1.47
NUP49YGL172W JLP2P40206 208 aa5.88□□□□□ -1.47
NUP49YGL172W GDS1P41913 522 aa5.88□□□□□ -1.47
NUP49YGL172W YJL016WP47072 561 aa5.88□□□□□ -1.47
NUP49YGL172W LYS20P48570 428 aaKnown RBP5.88□□□□□ -1.47
NUP49YGL172W SIP18P50263 79 aa5.88□□□□□ -1.47
NUP49YGL172W PMT5P52867 743 aa5.88□□□□□ -1.47
NUP49YGL172W RSM23Q01163 450 aa5.88□□□□□ -1.47
NUP49YGL172W API2Q04413 109 aa5.88□□□□□ -1.47
NUP49YGL172W FMP42Q04991 504 aa5.88□□□□□ -1.47
NUP49YGL172W ASR1Q06834 288 aa5.88□□□□□ -1.47
NUP49YGL172W LUC7Q07508 261 aaPredicted RBP5.88□□□□□ -1.47
NUP49YGL172W FIT3Q08907 204 aa5.88□□□□□ -1.47
NUP49YGL172W LYS21Q12122 440 aaKnown RBP5.88□□□□□ -1.47
NUP49YGL172W RNH203Q12338 110 aa5.88□□□□□ -1.47
NUP49YGL172W SPS100P13130 326 aa5.87□□□□□ -1.47
NUP49YGL172W DIT1P21623 536 aa5.87□□□□□ -1.47
NUP49YGL172W PAU2P32612 120 aa5.87□□□□□ -1.47
NUP49YGL172W APL3P38065 1025 aa5.87□□□□□ -1.47
NUP49YGL172W GPX2P38143 162 aa5.87□□□□□ -1.47
NUP49YGL172W SDS24P38314 527 aa5.87□□□□□ -1.47
NUP49YGL172W PUG1P40100 303 aa5.87□□□□□ -1.47
NUP49YGL172W DLS1P40366 167 aa5.87□□□□□ -1.47
NUP49YGL172W AVT7P40501 490 aa5.87□□□□□ -1.47
NUP49YGL172W IMO32P53219 342 aa5.87□□□□□ -1.47
NUP49YGL172W AAH1P53909 347 aa5.87□□□□□ -1.47
NUP49YGL172W YLR152CP54072 576 aa5.87□□□□□ -1.47
NUP49YGL172W ACS1Q01574 713 aa5.87□□□□□ -1.47
NUP49YGL172W TY1A-DR2Q03964 440 aaKnown RBP5.87□□□□□ -1.47
NUP49YGL172W GPN3Q06543 272 aa5.87□□□□□ -1.47
NUP49YGL172W TIR4Q12218 487 aaPredicted RBP5.87□□□□□ -1.47
NUP49YGL172W MES1P00958 751 aaKnown RBP5.86□□□□□ -1.47
NUP49YGL172W REP1P03871 373 aa5.86□□□□□ -1.47
NUP49YGL172W DSF1P0CX08 502 aa5.86□□□□□ -1.47
NUP49YGL172W YNR073CP0CX09 502 aa5.86□□□□□ -1.47
NUP49YGL172W NAM2P11325 894 aa5.86□□□□□ -1.47
NUP49YGL172W RPL5P26321 297 aaKnown RBP5.86□□□□□ -1.47
NUP49YGL172W CLG1P35190 452 aa5.86□□□□□ -1.47
NUP49YGL172W SFK1P35735 353 aa5.86□□□□□ -1.47
NUP49YGL172W SHE2P36068 246 aaKnown RBP RIP-Chip data5.86□□□□□ -1.47not detected
NUP49YGL172W PIG2P40187 538 aa5.86□□□□□ -1.47
NUP49YGL172W YMR144WP40214 342 aaKnown RBP5.86□□□□□ -1.47
NUP49YGL172W ATF1P40353 525 aa5.86□□□□□ -1.47
NUP49YGL172W CTK2P46962 323 aa5.86□□□□□ -1.47
NUP49YGL172W DOC1P53068 250 aa5.86□□□□□ -1.47
NUP49YGL172W YGL204CP53089 101 aa5.86□□□□□ -1.47
NUP49YGL172W YIP4P53093 235 aa5.86□□□□□ -1.47
NUP49YGL172W MTM1P53320 366 aa5.86□□□□□ -1.47
NUP49YGL172W CPR8P53728 308 aa5.86□□□□□ -1.47
NUP49YGL172W RCF1Q03713 159 aa5.86□□□□□ -1.47
NUP49YGL172W GCN4P03069 281 aa5.85□□□□□ -1.47
NUP49YGL172W SGA1P08019 549 aa5.85□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 39.7 ms