RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C SSH1P38353 490 aaKnown RBP2.13□□□□□ -2.07
VAB2YEL005C TEM1P38987 245 aa2.13□□□□□ -2.07
VAB2YEL005C PRM9P39551 298 aa2.13□□□□□ -2.07
VAB2YEL005C YJR141WP47172 347 aaPredicted RBP2.13□□□□□ -2.07
VAB2YEL005C MAL12P53341 584 aa2.13□□□□□ -2.07
VAB2YEL005C EBS1Q03466 884 aaKnown RBP2.13□□□□□ -2.07
VAB2YEL005C RPP0P05317 312 aaKnown RBP2.12□□□□□ -2.07
VAB2YEL005C HIS3P06633 220 aa2.12□□□□□ -2.07
VAB2YEL005C POX1P13711 748 aa2.12□□□□□ -2.07
VAB2YEL005C DPB2P24482 689 aaPredicted RBP2.12□□□□□ -2.07
VAB2YEL005C RNP1P32385 249 aa2.12□□□□□ -2.07
VAB2YEL005C SCC4P40090 624 aa2.12□□□□□ -2.07
VAB2YEL005C NBP35P52920 328 aa2.12□□□□□ -2.07
VAB2YEL005C AAH1P53909 347 aa2.12□□□□□ -2.07
VAB2YEL005C SWS2P53937 143 aa2.12□□□□□ -2.07
VAB2YEL005C CDC14Q00684 551 aa2.12□□□□□ -2.07
VAB2YEL005C YMR166CQ03829 368 aa2.12□□□□□ -2.07
VAB2YEL005C ATG17Q06410 417 aa2.12□□□□□ -2.07
VAB2YEL005C CDD1Q06549 142 aa2.12□□□□□ -2.07
VAB2YEL005C CLP1Q08685 445 aaPredicted RBP2.12□□□□□ -2.07
VAB2YEL005C SMT3Q12306 101 aaKnown RBP2.12□□□□□ -2.07
VAB2YEL005C POL30P15873 258 aaKnown RBP2.11□□□□□ -2.07
VAB2YEL005C SDH4P37298 181 aa2.11□□□□□ -2.07
VAB2YEL005C PRS2P38620 318 aaKnown RBP2.11□□□□□ -2.07
VAB2YEL005C YER084WP40057 128 aa2.11□□□□□ -2.07
VAB2YEL005C YER188WP40103 239 aa2.11□□□□□ -2.07
VAB2YEL005C DSN1P40568 576 aa2.11□□□□□ -2.07
VAB2YEL005C AGX1P43567 385 aa2.11□□□□□ -2.07
VAB2YEL005C YAR1P46683 200 aa2.11□□□□□ -2.07
VAB2YEL005C NBP1P52919 319 aaPredicted RBP2.11□□□□□ -2.07
VAB2YEL005C ASI3P53983 676 aa2.11□□□□□ -2.07
VAB2YEL005C MIX17Q03667 156 aa2.11□□□□□ -2.07
VAB2YEL005C BOP2Q06150 570 aa2.11□□□□□ -2.07
VAB2YEL005C CTS2Q06350 511 aa2.11□□□□□ -2.07
VAB2YEL005C YPR147CQ06522 304 aaKnown RBP2.11□□□□□ -2.07
VAB2YEL005C MED4Q12343 284 aa2.11□□□□□ -2.07
VAB2YEL005C YBL008W-AQ3E821 79 aa2.11□□□□□ -2.07
VAB2YEL005C TDH2P00358 332 aaKnown RBP2.1□□□□□ -2.07
VAB2YEL005C RNA15P25299 296 aaPredicted RBP2.1□□□□□ -2.07
VAB2YEL005C QRI5P32344 111 aa2.1□□□□□ -2.07
VAB2YEL005C COY1P34237 679 aa2.1□□□□□ -2.07
VAB2YEL005C FZO1P38297 855 aa2.1□□□□□ -2.07
VAB2YEL005C YHL049CP38722 271 aa2.1□□□□□ -2.07
VAB2YEL005C BNA6P43619 295 aa2.1□□□□□ -2.07
VAB2YEL005C YJL028WP47062 111 aa2.1□□□□□ -2.07
VAB2YEL005C OST3P48439 350 aa2.1□□□□□ -2.07
VAB2YEL005C MRPL50P53724 139 aa2.1□□□□□ -2.07
VAB2YEL005C LOA1Q06508 300 aa2.1□□□□□ -2.07
VAB2YEL005C RRT8Q08219 342 aa2.1□□□□□ -2.07
VAB2YEL005C SNU23Q12368 194 aaPredicted RBP2.1□□□□□ -2.07
VAB2YEL005C YBL112CQ3E7Y4 105 aa2.1□□□□□ -2.07
VAB2YEL005C RAD10P06838 210 aa2.09□□□□□ -2.07
VAB2YEL005C SGE1P33335 543 aa2.09□□□□□ -2.07
VAB2YEL005C BIG1P38813 335 aa2.09□□□□□ -2.07
VAB2YEL005C USE1P53146 245 aa2.09□□□□□ -2.07
VAB2YEL005C YDR124WQ04608 324 aa2.09□□□□□ -2.07
VAB2YEL005C YPR098CQ06089 161 aa2.09□□□□□ -2.07
VAB2YEL005C YLR173WQ06247 608 aa2.09□□□□□ -2.07
VAB2YEL005C PLB3Q08108 686 aa2.09□□□□□ -2.07
VAB2YEL005C RRS1Q08746 203 aaKnown RBP2.09□□□□□ -2.07
VAB2YEL005C MSF1P08425 469 aa2.08□□□□□ -2.08
VAB2YEL005C JEN1P36035 616 aa2.08□□□□□ -2.08
VAB2YEL005C DRE2P36152 348 aa2.08□□□□□ -2.08
VAB2YEL005C MRPL39P36533 70 aa2.08□□□□□ -2.08
VAB2YEL005C PRS4P38063 326 aaPredicted RBP2.08□□□□□ -2.08
VAB2YEL005C YGP1P38616 354 aaKnown RBP2.08□□□□□ -2.08
VAB2YEL005C DSK2P48510 373 aa2.08□□□□□ -2.08
VAB2YEL005C SSU72P53538 206 aaPredicted RBP2.08□□□□□ -2.08
VAB2YEL005C RRN5Q02983 363 aa2.08□□□□□ -2.08
VAB2YEL005C GOT1Q03554 138 aa2.08□□□□□ -2.08
VAB2YEL005C GRH1Q04410 372 aaKnown RBP2.08□□□□□ -2.08
VAB2YEL005C RRP40Q08285 240 aaKnown RBP2.08□□□□□ -2.08
VAB2YEL005C TY3A-GQ12173 290 aa2.08□□□□□ -2.08
VAB2YEL005C SNF8Q12483 233 aa2.08□□□□□ -2.08
VAB2YEL005C TY3A-IQ99219 290 aa2.08□□□□□ -2.08
VAB2YEL005C RHO3Q00245 231 aaKnown RBP2.07□□□□□ -2.08
VAB2YEL005C MYO5Q04439 1219 aaKnown RBP2.07□□□□□ -2.08
VAB2YEL005C YMR114CQ04471 368 aaKnown RBP2.07□□□□□ -2.08
VAB2YEL005C FCF1Q05498 189 aaPredicted RBP2.07□□□□□ -2.08
VAB2YEL005C SPO77Q06134 477 aa2.07□□□□□ -2.08
VAB2YEL005C SDO1Q07953 250 aaKnown RBP2.07□□□□□ -2.08
VAB2YEL005C AGC1Q12482 902 aa2.07□□□□□ -2.08
VAB2YEL005C YKR104WP0CE69 306 aa2.06□□□□□ -2.08
VAB2YEL005C TOM40P23644 387 aaKnown RBP2.06□□□□□ -2.08
VAB2YEL005C MRX3P38172 270 aa2.06□□□□□ -2.08
VAB2YEL005C YHR045WP38775 560 aa2.06□□□□□ -2.08
VAB2YEL005C GON7P46984 123 aa2.06□□□□□ -2.08
VAB2YEL005C PIR5P46999 287 aa2.06□□□□□ -2.08
VAB2YEL005C YNL134CP53912 376 aaKnown RBP2.06□□□□□ -2.08
VAB2YEL005C YPR011CQ12251 326 aa2.06□□□□□ -2.08
VAB2YEL005C GEP5Q12393 293 aa2.06□□□□□ -2.08
VAB2YEL005C YPL247CQ12523 523 aa2.06□□□□□ -2.08
VAB2YEL005C COS2P0CX12 379 aa2.05□□□□□ -2.08
VAB2YEL005C COS3P0CX13 379 aa2.05□□□□□ -2.08
VAB2YEL005C HOM6P31116 359 aaKnown RBP2.05□□□□□ -2.08
VAB2YEL005C SRB4P32569 687 aa2.05□□□□□ -2.08
VAB2YEL005C YHB1P39676 399 aaKnown RBP2.05□□□□□ -2.08
VAB2YEL005C SMB1P40018 196 aaKnown RBP2.05□□□□□ -2.08
VAB2YEL005C MDM34P53083 459 aa2.05□□□□□ -2.08
VAB2YEL005C RGM1Q00453 211 aa2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 78.1 ms