RNA–Protein interactions for RNA: YDR484W

VPS52, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS52, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS52YDR484W ATC1Q04005 294 aa1.39□□□□□ -2.19
VPS52YDR484W CTS2Q06350 511 aa1.39□□□□□ -2.19
VPS52YDR484W SUE1Q06524 206 aa1.39□□□□□ -2.19
VPS52YDR484W ARV1Q06541 321 aa1.39□□□□□ -2.19
VPS52YDR484W PLB3Q08108 686 aa1.39□□□□□ -2.19
VPS52YDR484W YOR283WQ12040 230 aaKnown RBP1.39□□□□□ -2.19
VPS52YDR484W SME1Q12330 94 aaPredicted RBP1.39□□□□□ -2.19
VPS52YDR484W NOT5Q12514 560 aaPredicted RBP1.39□□□□□ -2.19
VPS52YDR484W RPL24AP04449 155 aaKnown RBP1.38□□□□□ -2.19
VPS52YDR484W RPP0P05317 312 aaKnown RBP1.38□□□□□ -2.19
VPS52YDR484W RAD10P06838 210 aa1.38□□□□□ -2.19
VPS52YDR484W RNP1P32385 249 aa1.38□□□□□ -2.19
VPS52YDR484W PET100P38958 111 aa1.38□□□□□ -2.19
VPS52YDR484W PRM9P39551 298 aa1.38□□□□□ -2.19
VPS52YDR484W AAH1P53909 347 aa1.38□□□□□ -2.19
VPS52YDR484W CDC14Q00684 551 aa1.38□□□□□ -2.19
VPS52YDR484W YOR268CQ08734 132 aa1.38□□□□□ -2.19
VPS52YDR484W VPS68Q12016 184 aa1.38□□□□□ -2.19
VPS52YDR484W PST1Q12355 444 aa1.38□□□□□ -2.19
VPS52YDR484W STH1P32597 1359 aa1.38□□□□□ -2.19
VPS52YDR484W HIS1P00498 297 aaKnown RBP1.38□□□□□ -2.19
VPS52YDR484W COS2P0CX12 379 aa1.38□□□□□ -2.19
VPS52YDR484W COS3P0CX13 379 aa1.38□□□□□ -2.19
VPS52YDR484W HEK2P38199 381 aaKnown RBP RIP-Chip data1.38□□□□□ -2.19not detected
VPS52YDR484W YHL049CP38722 271 aa1.38□□□□□ -2.19
VPS52YDR484W RCY1P39531 840 aa1.38□□□□□ -2.19
VPS52YDR484W DDI1P40087 428 aa1.38□□□□□ -2.19
VPS52YDR484W COG3P40094 801 aa1.38□□□□□ -2.19
VPS52YDR484W YJL028WP47062 111 aa1.38□□□□□ -2.19
VPS52YDR484W YMR114CQ04471 368 aaKnown RBP1.38□□□□□ -2.19
VPS52YDR484W PEX10Q05568 337 aa1.38□□□□□ -2.19
VPS52YDR484W YPL247CQ12523 523 aa1.38□□□□□ -2.19
VPS52YDR484W GDH2P33327 1092 aaKnown RBP1.37□□□□□ -2.19
VPS52YDR484W MAL32P38158 584 aa1.37□□□□□ -2.19
VPS52YDR484W COA1P40452 197 aa1.37□□□□□ -2.19
VPS52YDR484W YJL016WP47072 561 aa1.37□□□□□ -2.19
VPS52YDR484W MAL12P53341 584 aa1.37□□□□□ -2.19
VPS52YDR484W BOP2Q06150 570 aa1.37□□□□□ -2.19
VPS52YDR484W SLD7Q08457 257 aa1.37□□□□□ -2.19
VPS52YDR484W PPH21P23594 369 aa1.36□□□□□ -2.19
VPS52YDR484W CWP1P28319 239 aa1.36□□□□□ -2.19
VPS52YDR484W GON7P46984 123 aa1.36□□□□□ -2.19
VPS52YDR484W YJR012CP47087 207 aa1.36□□□□□ -2.19
VPS52YDR484W YJR146WP47174 117 aa1.36□□□□□ -2.19
VPS52YDR484W MAL13P53338 473 aa1.36□□□□□ -2.19
VPS52YDR484W CGI121Q03705 181 aaKnown RBP1.36□□□□□ -2.19
VPS52YDR484W OM45P16547 393 aa1.36□□□□□ -2.19
VPS52YDR484W YHL026CP38740 315 aa1.36□□□□□ -2.19
VPS52YDR484W TIF34P40217 347 aaKnown RBP1.36□□□□□ -2.19
VPS52YDR484W MRPL49P40858 161 aaPredicted RBP1.36□□□□□ -2.19
VPS52YDR484W SLM2P53955 656 aa1.36□□□□□ -2.19
VPS52YDR484W GEP5Q12393 293 aa1.36□□□□□ -2.19
VPS52YDR484W MRP1P10662 321 aaKnown RBP1.35□□□□□ -2.19
VPS52YDR484W SCO1P23833 295 aa1.35□□□□□ -2.19
VPS52YDR484W MRPL37P36532 105 aa1.35□□□□□ -2.19
VPS52YDR484W DSN1P40568 576 aa1.35□□□□□ -2.19
VPS52YDR484W MDM34P53083 459 aa1.35□□□□□ -2.19
VPS52YDR484W COS6P53344 381 aa1.35□□□□□ -2.19
VPS52YDR484W ALG11P53954 548 aaKnown RBP1.35□□□□□ -2.19
VPS52YDR484W POX1P13711 748 aa1.34□□□□□ -2.19
VPS52YDR484W VPS3P23643 1011 aa1.34□□□□□ -2.19
VPS52YDR484W ECM13P38195 257 aa1.34□□□□□ -2.19
VPS52YDR484W RTT105P40063 208 aa1.34□□□□□ -2.19
VPS52YDR484W RPL10P41805 221 aaKnown RBP1.34□□□□□ -2.19
VPS52YDR484W ASI3P53983 676 aa1.34□□□□□ -2.19
VPS52YDR484W OST6Q03723 332 aa1.34□□□□□ -2.19
VPS52YDR484W PEX12Q04370 399 aa1.34□□□□□ -2.19
VPS52YDR484W EMI1Q04406 187 aa1.34□□□□□ -2.19
VPS52YDR484W EMC6Q12431 108 aa1.34□□□□□ -2.19
VPS52YDR484W COX2P00410 251 aa1.34□□□□□ -2.2
VPS52YDR484W CAB4P53332 305 aa1.34□□□□□ -2.2
VPS52YDR484W ADH6Q04894 360 aaKnown RBP1.34□□□□□ -2.2
VPS52YDR484W SNF8Q12483 233 aa1.34□□□□□ -2.2
VPS52YDR484W YPL119C-AQ3E751 87 aa1.34□□□□□ -2.2
VPS52YDR484W YBL008W-AQ3E821 79 aa1.34□□□□□ -2.2
VPS52YDR484W BEM2P39960 2167 aaKnown RBP1.33□□□□□ -2.2
VPS52YDR484W DAL82P21705 255 aa1.33□□□□□ -2.2
VPS52YDR484W SCM4P32564 187 aa1.33□□□□□ -2.2
VPS52YDR484W SSH1P38353 490 aaKnown RBP1.33□□□□□ -2.2
VPS52YDR484W MPP6P53725 186 aaPredicted RBP1.33□□□□□ -2.2
VPS52YDR484W EBS1Q03466 884 aaKnown RBP1.33□□□□□ -2.2
VPS52YDR484W ATG17Q06410 417 aa1.33□□□□□ -2.2
VPS52YDR484W SAS5Q99314 248 aa1.33□□□□□ -2.2
VPS52YDR484W QRI5P32344 111 aa1.32□□□□□ -2.2
VPS52YDR484W PRS2P38620 318 aaKnown RBP1.32□□□□□ -2.2
VPS52YDR484W YAR1P46683 200 aa1.32□□□□□ -2.2
VPS52YDR484W OST2P46964 130 aa1.32□□□□□ -2.2
VPS52YDR484W GPI8P49018 411 aa1.32□□□□□ -2.2
VPS52YDR484W COX20Q04935 205 aa1.32□□□□□ -2.2
VPS52YDR484W CCA1P21269 546 aa1.32□□□□□ -2.2
VPS52YDR484W NRG2P38082 220 aa1.32□□□□□ -2.2
VPS52YDR484W GRE3P38715 327 aaKnown RBP RIP-Chip data1.32□□□□□ -2.2not detected
VPS52YDR484W YJL118WP47022 219 aa1.32□□□□□ -2.2
VPS52YDR484W DAN1P47178 298 aa1.32□□□□□ -2.2
VPS52YDR484W YDR124WQ04608 324 aa1.32□□□□□ -2.2
VPS52YDR484W YPR147CQ06522 304 aaKnown RBP1.32□□□□□ -2.2
VPS52YDR484W YPR011CQ12251 326 aa1.32□□□□□ -2.2
VPS52YDR484W SGA1P08019 549 aa1.31□□□□□ -2.2
VPS52YDR484W COS8P38723 381 aa1.31□□□□□ -2.2
VPS52YDR484W NBP1P52919 319 aaPredicted RBP1.31□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 27.4 ms