RNA–Protein interactions for RNA: YDR170W-A

YDR170W-A, Transcript of Retrotransposon TYA Gag gene, yeastyeast

Gene YDR170W-A, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR170W-AYDR170W-A COS3P0CX13 379 aa2.31□□□□□ -2.04
YDR170W-AYDR170W-A HOM6P31116 359 aaKnown RBP2.31□□□□□ -2.04
YDR170W-AYDR170W-A IME2P32581 645 aa2.31□□□□□ -2.04
YDR170W-AYDR170W-A CSG2P35206 410 aa2.31□□□□□ -2.04
YDR170W-AYDR170W-A SUR2P38992 349 aa2.31□□□□□ -2.04
YDR170W-AYDR170W-A AAH1P53909 347 aa2.31□□□□□ -2.04
YDR170W-AYDR170W-A TIM11P81449 96 aaPredicted RBP2.31□□□□□ -2.04
YDR170W-AYDR170W-A GTO3Q04806 366 aa2.31□□□□□ -2.04
YDR170W-AYDR170W-A PEX10Q05568 337 aa2.31□□□□□ -2.04
YDR170W-AYDR170W-A YLR283WQ05867 314 aa2.31□□□□□ -2.04
YDR170W-AYDR170W-A ATG17Q06410 417 aa2.31□□□□□ -2.04
YDR170W-AYDR170W-A YPR063CQ12160 140 aa2.31□□□□□ -2.04
YDR170W-AYDR170W-A RFM1Q12192 310 aa2.31□□□□□ -2.04
YDR170W-AYDR170W-A ZWF1P11412 505 aaKnown RBP2.3□□□□□ -2.04
YDR170W-AYDR170W-A POX1P13711 748 aa2.3□□□□□ -2.04
YDR170W-AYDR170W-A YCR016WP25617 290 aaKnown RBP2.3□□□□□ -2.04
YDR170W-AYDR170W-A JEN1P36035 616 aa2.3□□□□□ -2.04
YDR170W-AYDR170W-A ARN2P38724 620 aa2.3□□□□□ -2.04
YDR170W-AYDR170W-A ECM14P38836 430 aa2.3□□□□□ -2.04
YDR170W-AYDR170W-A OST3P48439 350 aa2.3□□□□□ -2.04
YDR170W-AYDR170W-A USE1P53146 245 aa2.3□□□□□ -2.04
YDR170W-AYDR170W-A ASI3P53983 676 aa2.3□□□□□ -2.04
YDR170W-AYDR170W-A YPL039WQ03080 316 aa2.3□□□□□ -2.04
YDR170W-AYDR170W-A RNH1Q04740 348 aa2.3□□□□□ -2.04
YDR170W-AYDR170W-A RUD3Q12234 484 aaKnown RBP2.3□□□□□ -2.04
YDR170W-AYDR170W-A YPS3Q12303 508 aa2.3□□□□□ -2.04
YDR170W-AYDR170W-A SRB4P32569 687 aa2.29□□□□□ -2.04
YDR170W-AYDR170W-A TKL2P33315 681 aa2.29□□□□□ -2.04
YDR170W-AYDR170W-A SPL2P38839 148 aa2.29□□□□□ -2.04
YDR170W-AYDR170W-A YER085CP40058 173 aa2.29□□□□□ -2.04
YDR170W-AYDR170W-A ECO1P43605 281 aa2.29□□□□□ -2.04
YDR170W-AYDR170W-A BUD13P46947 266 aaPredicted RBP2.29□□□□□ -2.04
YDR170W-AYDR170W-A HOC1P47124 396 aa2.29□□□□□ -2.04
YDR170W-AYDR170W-A YPL150WQ12152 901 aa2.29□□□□□ -2.04
YDR170W-AYDR170W-A ISD11Q6Q560 94 aa2.29□□□□□ -2.04
YDR170W-AYDR170W-A YEL009C-AA0A023PZF2 135 aa2.28□□□□□ -2.04
YDR170W-AYDR170W-A TDH2P00358 332 aaKnown RBP2.28□□□□□ -2.04
YDR170W-AYDR170W-A RPS23AP0CX29 145 aaKnown RBP2.28□□□□□ -2.04
YDR170W-AYDR170W-A RPS23BP0CX30 145 aa2.28□□□□□ -2.04
YDR170W-AYDR170W-A RPS5P26783 225 aaKnown RBP2.28□□□□□ -2.04
YDR170W-AYDR170W-A EHD3P28817 500 aa2.28□□□□□ -2.04
YDR170W-AYDR170W-A BMH1P29311 267 aaKnown RBP2.28□□□□□ -2.04
YDR170W-AYDR170W-A MSN4P33749 630 aa2.28□□□□□ -2.04
YDR170W-AYDR170W-A YBR096WP38256 230 aa2.28□□□□□ -2.04
YDR170W-AYDR170W-A FZO1P38297 855 aa2.28□□□□□ -2.04
YDR170W-AYDR170W-A ALG9P53868 555 aaKnown RBP2.28□□□□□ -2.04
YDR170W-AYDR170W-A YPR098CQ06089 161 aa2.28□□□□□ -2.04
YDR170W-AYDR170W-A COQ10Q08058 207 aa2.28□□□□□ -2.04
YDR170W-AYDR170W-A PLB3Q08108 686 aa2.28□□□□□ -2.04
YDR170W-AYDR170W-A YCT1Q12235 531 aa2.28□□□□□ -2.04
YDR170W-AYDR170W-A SMT3Q12306 101 aaKnown RBP2.28□□□□□ -2.04
YDR170W-AYDR170W-A YBL112CQ3E7Y4 105 aa2.28□□□□□ -2.04
YDR170W-AYDR170W-A TCP1P12612 559 aaKnown RBP2.27□□□□□ -2.05
YDR170W-AYDR170W-A RPO26P20435 155 aa2.27□□□□□ -2.05
YDR170W-AYDR170W-A LDB7P38210 180 aa2.27□□□□□ -2.05
YDR170W-AYDR170W-A THO1P40040 218 aaKnown RBP2.27□□□□□ -2.05
YDR170W-AYDR170W-A GCN20P43535 752 aaKnown RBP2.27□□□□□ -2.05
YDR170W-AYDR170W-A YJR079WP47126 109 aa2.27□□□□□ -2.05
YDR170W-AYDR170W-A JHD2P47156 728 aaPredicted RBP2.27□□□□□ -2.05
YDR170W-AYDR170W-A MIG2P53035 382 aa2.27□□□□□ -2.05
YDR170W-AYDR170W-A YMR166CQ03829 368 aa2.27□□□□□ -2.05
YDR170W-AYDR170W-A MYO5Q04439 1219 aaKnown RBP2.27□□□□□ -2.05
YDR170W-AYDR170W-A YPR147CQ06522 304 aaKnown RBP2.27□□□□□ -2.05
YDR170W-AYDR170W-A SNU23Q12368 194 aaPredicted RBP2.27□□□□□ -2.05
YDR170W-AYDR170W-A MRX4Q12467 430 aa2.27□□□□□ -2.05
YDR170W-AYDR170W-A PAN1P32521 1480 aa2.27□□□□□ -2.05
YDR170W-AYDR170W-A NUP157P40064 1391 aaKnown RBP2.27□□□□□ -2.05
YDR170W-AYDR170W-A CFT1Q06632 1357 aaKnown RBP2.27□□□□□ -2.05
YDR170W-AYDR170W-A YKR104WP0CE69 306 aa2.26□□□□□ -2.05
YDR170W-AYDR170W-A GOS1P38736 223 aa2.26□□□□□ -2.05
YDR170W-AYDR170W-A BFR1P38934 470 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
YDR170W-AYDR170W-A TEM1P38987 245 aa2.26□□□□□ -2.05
YDR170W-AYDR170W-A YJL028WP47062 111 aa2.26□□□□□ -2.05
YDR170W-AYDR170W-A NIF3P53081 288 aa2.26□□□□□ -2.05
YDR170W-AYDR170W-A MRH4P53166 561 aa2.26□□□□□ -2.05
YDR170W-AYDR170W-A CTF19Q02732 369 aa2.26□□□□□ -2.05
YDR170W-AYDR170W-A SPG4Q04438 115 aa2.26□□□□□ -2.05
YDR170W-AYDR170W-A YDR114CQ04597 100 aa2.26□□□□□ -2.05
YDR170W-AYDR170W-A RRS1Q08746 203 aaKnown RBP2.26□□□□□ -2.05
YDR170W-AYDR170W-A TIM22Q12328 207 aa2.26□□□□□ -2.05
YDR170W-AYDR170W-A MATALPHA1P0CY06 175 aa2.25□□□□□ -2.05
YDR170W-AYDR170W-A HMLALPHA1P0CY07 175 aa2.25□□□□□ -2.05
YDR170W-AYDR170W-A MRPL25P23369 157 aa2.25□□□□□ -2.05
YDR170W-AYDR170W-A DPB2P24482 689 aaPredicted RBP2.25□□□□□ -2.05
YDR170W-AYDR170W-A SFC1P33303 322 aa2.25□□□□□ -2.05
YDR170W-AYDR170W-A YKL075CP36083 450 aa2.25□□□□□ -2.05
YDR170W-AYDR170W-A RTR1P40084 226 aaPredicted RBP2.25□□□□□ -2.05
YDR170W-AYDR170W-A SNZ3P43545 298 aa2.25□□□□□ -2.05
YDR170W-AYDR170W-A FCF1Q05498 189 aaPredicted RBP2.25□□□□□ -2.05
YDR170W-AYDR170W-A SPO77Q06134 477 aa2.25□□□□□ -2.05
YDR170W-AYDR170W-A YOL019WQ08157 551 aa2.25□□□□□ -2.05
YDR170W-AYDR170W-A SYC1Q08553 188 aaPredicted RBP2.25□□□□□ -2.05
YDR170W-AYDR170W-A YPL247CQ12523 523 aa2.25□□□□□ -2.05
YDR170W-AYDR170W-A HIS3P06633 220 aa2.24□□□□□ -2.05
YDR170W-AYDR170W-A PPH21P23594 369 aa2.24□□□□□ -2.05
YDR170W-AYDR170W-A TOM40P23644 387 aaKnown RBP2.24□□□□□ -2.05
YDR170W-AYDR170W-A SGE1P33335 543 aa2.24□□□□□ -2.05
YDR170W-AYDR170W-A BMH2P34730 273 aaKnown RBP2.24□□□□□ -2.05
YDR170W-AYDR170W-A CAB3P36076 571 aa2.24□□□□□ -2.05
YDR170W-AYDR170W-A DRE2P36152 348 aa2.24□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 36.4 ms