RNA–Protein interactions for RNA: YDR022C

ATG31, Transcript of Autophagy-specific protein required for autophagosome formation, yeast

Gene ATG31, Length 591 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG31	YDR022C	RPL4B	P49626	362 aa	Known RBP	0.7	□□□□□ -2.3
ATG31	YDR022C	TIM21	P53220	239 aa		0.7	□□□□□ -2.3
ATG31	YDR022C	SLX9	P53251	210 aa	Predicted RBP	0.7	□□□□□ -2.3
ATG31	YDR022C	PRM15	Q03262	622 aa		0.7	□□□□□ -2.3
ATG31	YDR022C	MGR3	Q04472	501 aa		0.7	□□□□□ -2.3
ATG31	YDR022C	SFH1	Q06168	426 aa		0.7	□□□□□ -2.3
ATG31	YDR022C	LOA1	Q06508	300 aa		0.7	□□□□□ -2.3
ATG31	YDR022C	COS2	P0CX12	379 aa		0.69	□□□□□ -2.3
ATG31	YDR022C	COS3	P0CX13	379 aa		0.69	□□□□□ -2.3
ATG31	YDR022C	PPH21	P23594	369 aa		0.69	□□□□□ -2.3
ATG31	YDR022C	CWP1	P28319	239 aa		0.69	□□□□□ -2.3
ATG31	YDR022C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	0.69	□□□□□ -2.3	not detected
ATG31	YDR022C	SER33	P40510	469 aa		0.69	□□□□□ -2.3
ATG31	YDR022C	PRO2	P54885	456 aa	Known RBP	0.69	□□□□□ -2.3
ATG31	YDR022C	PEX10	Q05568	337 aa		0.69	□□□□□ -2.3
ATG31	YDR022C	YOS9	Q99220	542 aa		0.69	□□□□□ -2.3
ATG31	YDR022C	YSR3	P23501	404 aa		0.68	□□□□□ -2.3
ATG31	YDR022C	YHB1	P39676	399 aa	Known RBP	0.68	□□□□□ -2.3
ATG31	YDR022C	PEP8	P40335	379 aa		0.68	□□□□□ -2.3
ATG31	YDR022C	YNL050C	P53952	270 aa		0.68	□□□□□ -2.3
ATG31	YDR022C	ATC1	Q04005	294 aa		0.68	□□□□□ -2.3
ATG31	YDR022C	EMI1	Q04406	187 aa		0.68	□□□□□ -2.3
ATG31	YDR022C	MDY2	Q12285	212 aa		0.68	□□□□□ -2.3
ATG31	YDR022C	AI5_BETA	Q9ZZX0	354 aa		0.68	□□□□□ -2.3
ATG31	YDR022C	RPC40	P07703	335 aa	Known RBP	0.67	□□□□□ -2.3
ATG31	YDR022C	SGA1	P08019	549 aa		0.67	□□□□□ -2.3
ATG31	YDR022C	YOL162W	P0CF19	215 aa		0.67	□□□□□ -2.3
ATG31	YDR022C	UGA1	P17649	471 aa		0.67	□□□□□ -2.3
ATG31	YDR022C	CCA1	P21269	546 aa		0.67	□□□□□ -2.3
ATG31	YDR022C	POF1	P25576	258 aa		0.67	□□□□□ -2.3
ATG31	YDR022C	YHL049C	P38722	271 aa		0.67	□□□□□ -2.3
ATG31	YDR022C	PRM9	P39551	298 aa		0.67	□□□□□ -2.3
ATG31	YDR022C	OST2	P46964	130 aa		0.67	□□□□□ -2.3
ATG31	YDR022C	PNC1	P53184	216 aa	Known RBP	0.67	□□□□□ -2.3
ATG31	YDR022C	YNL260C	P53846	198 aa		0.67	□□□□□ -2.3
ATG31	YDR022C	TRM44	Q02648	567 aa	Known RBP	0.67	□□□□□ -2.3
ATG31	YDR022C	VBA1	Q04301	562 aa		0.67	□□□□□ -2.3
ATG31	YDR022C	BCP1	Q06338	283 aa		0.67	□□□□□ -2.3
ATG31	YDR022C	YPR011C	Q12251	326 aa		0.67	□□□□□ -2.3
ATG31	YDR022C	FBA1	P14540	359 aa	Known RBP	0.66	□□□□□ -2.3
ATG31	YDR022C	OPI1	P21957	404 aa		0.66	□□□□□ -2.3
ATG31	YDR022C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	0.66	□□□□□ -2.3	not detected
ATG31	YDR022C	RCN1	P36054	211 aa		0.66	□□□□□ -2.3
ATG31	YDR022C	SSH1	P38353	490 aa	Known RBP	0.66	□□□□□ -2.3
ATG31	YDR022C	SHC1	P39000	512 aa		0.66	□□□□□ -2.3
ATG31	YDR022C	AAH1	P53909	347 aa		0.66	□□□□□ -2.3
ATG31	YDR022C	DAD3	P69850	94 aa		0.66	□□□□□ -2.3
ATG31	YDR022C	SPO19	Q03029	223 aa		0.66	□□□□□ -2.3
ATG31	YDR022C	CTR3	Q06686	241 aa		0.66	□□□□□ -2.3
ATG31	YDR022C	REX3	Q12090	404 aa		0.66	□□□□□ -2.3
ATG31	YDR022C	BBP1	Q12365	385 aa		0.66	□□□□□ -2.3
ATG31	YDR022C	YBL008W-A	Q3E821	79 aa		0.66	□□□□□ -2.3
ATG31	YDR022C	YHR032W-A	P0C5N6	59 aa		0.65	□□□□□ -2.31
ATG31	YDR022C	TPM1	P17536	199 aa	Known RBP	0.65	□□□□□ -2.31
ATG31	YDR022C	YKR045C	P36138	183 aa		0.65	□□□□□ -2.31
ATG31	YDR022C	ECM13	P38195	257 aa		0.65	□□□□□ -2.31
ATG31	YDR022C	VPS45	P38932	577 aa		0.65	□□□□□ -2.31
ATG31	YDR022C	VTC1	P40046	129 aa	RIP-Chip data	0.65	□□□□□ -2.31	not detected
ATG31	YDR022C	MRX5	P47007	382 aa		0.65	□□□□□ -2.31
ATG31	YDR022C	NBP35	P52920	328 aa		0.65	□□□□□ -2.31
ATG31	YDR022C	RSM10	Q03201	203 aa		0.65	□□□□□ -2.31
ATG31	YDR022C	YLR179C	Q06252	201 aa	Known RBP	0.65	□□□□□ -2.31
ATG31	YDR022C	ATO3	Q12359	275 aa		0.65	□□□□□ -2.31
ATG31	YDR022C	RAS2	P01120	322 aa	Known RBP	0.64	□□□□□ -2.31
ATG31	YDR022C	RPP0	P05317	312 aa	Known RBP	0.64	□□□□□ -2.31
ATG31	YDR022C	CDC7	P06243	507 aa		0.64	□□□□□ -2.31
ATG31	YDR022C	FRS2	P15625	503 aa	Known RBP	0.64	□□□□□ -2.31
ATG31	YDR022C	SEC22	P22214	214 aa		0.64	□□□□□ -2.31
ATG31	YDR022C	PEX4	P29340	183 aa		0.64	□□□□□ -2.31
ATG31	YDR022C	HSM3	P38348	480 aa		0.64	□□□□□ -2.31
ATG31	YDR022C	ARC15	P40518	154 aa	RIP-Chip data	0.64	□□□□□ -2.31	not detected
ATG31	YDR022C	PRM10	P42946	383 aa		0.64	□□□□□ -2.31
ATG31	YDR022C	CIS3	P47001	227 aa		0.64	□□□□□ -2.31
ATG31	YDR022C	YGL185C	P53100	379 aa		0.64	□□□□□ -2.31
ATG31	YDR022C	SWS2	P53937	143 aa		0.64	□□□□□ -2.31
ATG31	YDR022C	ARP5	P53946	755 aa		0.64	□□□□□ -2.31
ATG31	YDR022C	ASI3	P53983	676 aa		0.64	□□□□□ -2.31
ATG31	YDR022C	CDC14	Q00684	551 aa		0.64	□□□□□ -2.31
ATG31	YDR022C	ARV1	Q06541	321 aa		0.64	□□□□□ -2.31
ATG31	YDR022C	STH1	P32597	1359 aa		0.64	□□□□□ -2.31
ATG31	YDR022C	SCL1	P21243	252 aa	Known RBP	0.63	□□□□□ -2.31
ATG31	YDR022C	MEK1	P24719	497 aa	Predicted RBP	0.63	□□□□□ -2.31
ATG31	YDR022C	VMA11	P32842	164 aa		0.63	□□□□□ -2.31
ATG31	YDR022C	PRS4	P38063	326 aa	Predicted RBP	0.63	□□□□□ -2.31
ATG31	YDR022C	COS8	P38723	381 aa		0.63	□□□□□ -2.31
ATG31	YDR022C	BMT5	P40493	336 aa		0.63	□□□□□ -2.31
ATG31	YDR022C	LOC1	P43586	204 aa	Predicted RBP	0.63	□□□□□ -2.31
ATG31	YDR022C	GCD14	P46959	383 aa	Predicted RBP	0.63	□□□□□ -2.31
ATG31	YDR022C	ERG25	P53045	309 aa		0.63	□□□□□ -2.31
ATG31	YDR022C	MAL13	P53338	473 aa		0.63	□□□□□ -2.31
ATG31	YDR022C	MNT4	P53745	580 aa		0.63	□□□□□ -2.31
ATG31	YDR022C	CYT2	Q00873	224 aa		0.63	□□□□□ -2.31
ATG31	YDR022C	MRPS8	Q03799	155 aa		0.63	□□□□□ -2.31
ATG31	YDR022C	ERV41	Q04651	352 aa		0.63	□□□□□ -2.31
ATG31	YDR022C	CYR1	P08678	2026 aa	Known RBP	0.62	□□□□□ -2.31
ATG31	YDR022C	DSF1	P0CX08	502 aa		0.62	□□□□□ -2.31
ATG31	YDR022C	YNR073C	P0CX09	502 aa		0.62	□□□□□ -2.31
ATG31	YDR022C	POX1	P13711	748 aa		0.62	□□□□□ -2.31
ATG31	YDR022C	MET16	P18408	261 aa	Predicted RBP	0.62	□□□□□ -2.31
ATG31	YDR022C	MDH2	P22133	377 aa		0.62	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 64.5 ms