RNA–Protein interactions for RNA: YDL064W

UBC9, Transcript of SUMO-conjugating enzyme involved in the Smt3p conjugation pathway, yeastyeast

Gene UBC9, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC9YDL064W PET100P38958 111 aa2.35□□□□□ -2.03
UBC9YDL064W RPL10P41805 221 aaKnown RBP2.35□□□□□ -2.03
UBC9YDL064W MIX17Q03667 156 aa2.35□□□□□ -2.03
UBC9YDL064W BTS1Q12051 335 aa2.35□□□□□ -2.03
UBC9YDL064W AGC1Q12482 902 aa2.35□□□□□ -2.03
UBC9YDL064W YPL119C-AQ3E751 87 aa2.35□□□□□ -2.03
UBC9YDL064W STH1P32597 1359 aa2.35□□□□□ -2.03
UBC9YDL064W NUP157P40064 1391 aaKnown RBP2.35□□□□□ -2.03
UBC9YDL064W MSF1P08425 469 aa2.34□□□□□ -2.03
UBC9YDL064W DAL82P21705 255 aa2.34□□□□□ -2.03
UBC9YDL064W CWP1P28319 239 aa2.34□□□□□ -2.03
UBC9YDL064W EHD3P28817 500 aa2.34□□□□□ -2.03
UBC9YDL064W COY1P34237 679 aa2.34□□□□□ -2.03
UBC9YDL064W MED6P38782 295 aa2.34□□□□□ -2.03
UBC9YDL064W SHC1P39000 512 aa2.34□□□□□ -2.03
UBC9YDL064W YJL028WP47062 111 aa2.34□□□□□ -2.03
UBC9YDL064W NIF3P53081 288 aa2.34□□□□□ -2.03
UBC9YDL064W SSU72P53538 206 aaPredicted RBP2.34□□□□□ -2.03
UBC9YDL064W PEX10Q05568 337 aa2.34□□□□□ -2.03
UBC9YDL064W NOT5Q12514 560 aaPredicted RBP2.34□□□□□ -2.03
UBC9YDL064W ISD11Q6Q560 94 aa2.34□□□□□ -2.03
UBC9YDL064W YEL009C-AA0A023PZF2 135 aa2.33□□□□□ -2.04
UBC9YDL064W RAD10P06838 210 aa2.33□□□□□ -2.04
UBC9YDL064W MRP1P10662 321 aaKnown RBP2.33□□□□□ -2.04
UBC9YDL064W RSR1P13856 272 aa2.33□□□□□ -2.04
UBC9YDL064W RRT12P25381 491 aa2.33□□□□□ -2.04
UBC9YDL064W RSA4P25382 515 aaKnown RBP2.33□□□□□ -2.04
UBC9YDL064W CAB3P36076 571 aa2.33□□□□□ -2.04
UBC9YDL064W YKR032WP36127 104 aa2.33□□□□□ -2.04
UBC9YDL064W PRS2P38620 318 aaKnown RBP2.33□□□□□ -2.04
UBC9YDL064W YHI9P38765 294 aa2.33□□□□□ -2.04
UBC9YDL064W YOR029WQ12243 111 aa2.33□□□□□ -2.04
UBC9YDL064W YPL247CQ12523 523 aa2.33□□□□□ -2.04
UBC9YDL064W SMB1P40018 196 aaKnown RBP2.32□□□□□ -2.04
UBC9YDL064W DSN1P40568 576 aa2.32□□□□□ -2.04
UBC9YDL064W GLG2P47011 380 aa2.32□□□□□ -2.04
UBC9YDL064W MDM34P53083 459 aa2.32□□□□□ -2.04
UBC9YDL064W YGL034CP53186 121 aa2.32□□□□□ -2.04
UBC9YDL064W CTF19Q02732 369 aa2.32□□□□□ -2.04
UBC9YDL064W EMI1Q04406 187 aa2.32□□□□□ -2.04
UBC9YDL064W ADH6Q04894 360 aaKnown RBP2.32□□□□□ -2.04
UBC9YDL064W SDO1Q07953 250 aaKnown RBP2.32□□□□□ -2.04
UBC9YDL064W YOR268CQ08734 132 aa2.32□□□□□ -2.04
UBC9YDL064W GDH2P33327 1092 aaKnown RBP2.31□□□□□ -2.04
UBC9YDL064W JEN1P36035 616 aa2.31□□□□□ -2.04
UBC9YDL064W AGX1P43567 385 aa2.31□□□□□ -2.04
UBC9YDL064W SLX9P53251 210 aaPredicted RBP2.31□□□□□ -2.04
UBC9YDL064W SYF2P53277 215 aaPredicted RBP2.31□□□□□ -2.04
UBC9YDL064W IGO1P53897 168 aa2.31□□□□□ -2.04
UBC9YDL064W AAH1P53909 347 aa2.31□□□□□ -2.04
UBC9YDL064W YNL134CP53912 376 aaKnown RBP2.31□□□□□ -2.04
UBC9YDL064W RDS3Q06835 107 aaPredicted RBP2.31□□□□□ -2.04
UBC9YDL064W POX1P13711 748 aa2.3□□□□□ -2.04
UBC9YDL064W DPB2P24482 689 aaPredicted RBP2.3□□□□□ -2.04
UBC9YDL064W UTR5P32630 166 aa2.3□□□□□ -2.04
UBC9YDL064W YBR096WP38256 230 aa2.3□□□□□ -2.04
UBC9YDL064W YHR045WP38775 560 aa2.3□□□□□ -2.04
UBC9YDL064W GON7P46984 123 aa2.3□□□□□ -2.04
UBC9YDL064W BOP2Q06150 570 aa2.3□□□□□ -2.04
UBC9YDL064W YPR011CQ12251 326 aa2.3□□□□□ -2.04
UBC9YDL064W GEP5Q12393 293 aa2.3□□□□□ -2.04
UBC9YDL064W RAD3P06839 778 aa2.29□□□□□ -2.04
UBC9YDL064W PPH21P23594 369 aa2.29□□□□□ -2.04
UBC9YDL064W PRS4P38063 326 aaPredicted RBP2.29□□□□□ -2.04
UBC9YDL064W SNZ3P43545 298 aa2.29□□□□□ -2.04
UBC9YDL064W YJR146WP47174 117 aa2.29□□□□□ -2.04
UBC9YDL064W VPS3P23643 1011 aa2.28□□□□□ -2.04
UBC9YDL064W BMH1P29311 267 aaKnown RBP2.28□□□□□ -2.04
UBC9YDL064W SFC1P33303 322 aa2.28□□□□□ -2.04
UBC9YDL064W MAL32P38158 584 aa2.28□□□□□ -2.04
UBC9YDL064W MRX3P38172 270 aa2.28□□□□□ -2.04
UBC9YDL064W BNA6P43619 295 aa2.28□□□□□ -2.04
UBC9YDL064W MAL12P53341 584 aa2.28□□□□□ -2.04
UBC9YDL064W YDR209CQ03480 137 aa2.28□□□□□ -2.04
UBC9YDL064W GRH1Q04410 372 aaKnown RBP2.28□□□□□ -2.04
UBC9YDL064W YLR179CQ06252 201 aaKnown RBP2.28□□□□□ -2.04
UBC9YDL064W DPM1P14020 267 aaKnown RBP2.27□□□□□ -2.05
UBC9YDL064W HOM6P31116 359 aaKnown RBP2.27□□□□□ -2.05
UBC9YDL064W ECM13P38195 257 aa2.27□□□□□ -2.05
UBC9YDL064W YJR141WP47172 347 aaPredicted RBP2.27□□□□□ -2.05
UBC9YDL064W CAB4P53332 305 aa2.27□□□□□ -2.05
UBC9YDL064W YMR114CQ04471 368 aaKnown RBP2.27□□□□□ -2.05
UBC9YDL064W YLR173WQ06247 608 aa2.27□□□□□ -2.05
UBC9YDL064W COQ10Q08058 207 aa2.27□□□□□ -2.05
UBC9YDL064W MSH5Q12175 901 aa2.27□□□□□ -2.05
UBC9YDL064W SMT3Q12306 101 aaKnown RBP2.27□□□□□ -2.05
UBC9YDL064W PST1Q12355 444 aa2.27□□□□□ -2.05
UBC9YDL064W SNF8Q12483 233 aa2.27□□□□□ -2.05
UBC9YDL064W YBL008W-AQ3E821 79 aa2.27□□□□□ -2.05
UBC9YDL064W SWI1P09547 1314 aa2.26□□□□□ -2.05
UBC9YDL064W TCP1P12612 559 aaKnown RBP2.26□□□□□ -2.05
UBC9YDL064W RNP1P32385 249 aa2.26□□□□□ -2.05
UBC9YDL064W TEM1P38987 245 aa2.26□□□□□ -2.05
UBC9YDL064W ASI3P53983 676 aa2.26□□□□□ -2.05
UBC9YDL064W RRN5Q02983 363 aa2.26□□□□□ -2.05
UBC9YDL064W ATG31Q12421 196 aa2.26□□□□□ -2.05
UBC9YDL064W GOS1P38736 223 aa2.25□□□□□ -2.05
UBC9YDL064W SNZ2P53824 298 aa2.25□□□□□ -2.05
UBC9YDL064W RSM10Q03201 203 aa2.25□□□□□ -2.05
UBC9YDL064W YPR147CQ06522 304 aaKnown RBP2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 42.7 ms