RNA–Protein interactions for RNA: YAL011W

SWC3, Transcript of Protein of unknown function, yeast

Gene SWC3, Length 1,878 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWC3	YAL011W	YHR035W	P38769	630 aa		4.14	□□□□□ -1.75
SWC3	YAL011W	VMA22	P38784	181 aa		4.14	□□□□□ -1.75
SWC3	YAL011W	NVJ1	P38881	321 aa		4.14	□□□□□ -1.75
SWC3	YAL011W	MBB1	P39534	108 aa		4.14	□□□□□ -1.75
SWC3	YAL011W	POG1	P40473	351 aa		4.14	□□□□□ -1.75
SWC3	YAL011W	ICE2	P40499	491 aa		4.14	□□□□□ -1.75
SWC3	YAL011W	RPL10	P41805	221 aa	Known RBP	4.14	□□□□□ -1.75
SWC3	YAL011W	NUP57	P48837	541 aa		4.14	□□□□□ -1.75
SWC3	YAL011W	YGL117W	P53133	265 aa		4.14	□□□□□ -1.75
SWC3	YAL011W	MRH4	P53166	561 aa		4.14	□□□□□ -1.75
SWC3	YAL011W	BUD17	P53727	317 aa		4.14	□□□□□ -1.75
SWC3	YAL011W	YPL113C	Q02961	396 aa		4.14	□□□□□ -1.75
SWC3	YAL011W	CTL1	Q03220	320 aa	Known RBP	4.14	□□□□□ -1.75
SWC3	YAL011W	YML096W	Q04489	525 aa		4.14	□□□□□ -1.75
SWC3	YAL011W	COQ11	Q05892	277 aa		4.14	□□□□□ -1.75
SWC3	YAL011W	SKI7	Q08491	747 aa	Predicted RBP	4.14	□□□□□ -1.75
SWC3	YAL011W	GRE1	Q08969	168 aa		4.14	□□□□□ -1.75
SWC3	YAL011W	SWM1	Q12379	170 aa		4.14	□□□□□ -1.75
SWC3	YAL011W	YPR117W	Q06116	2489 aa		4.14	□□□□□ -1.75
SWC3	YAL011W	CYR1	P08678	2026 aa	Known RBP	4.14	□□□□□ -1.75
SWC3	YAL011W	QCR2	P07257	368 aa		4.13	□□□□□ -1.75
SWC3	YAL011W	YBR121C-A	P0C5L4	52 aa		4.13	□□□□□ -1.75
SWC3	YAL011W	CHA1	P25379	360 aa	Known RBP	4.13	□□□□□ -1.75
SWC3	YAL011W	PUT3	P25502	979 aa	Predicted RBP	4.13	□□□□□ -1.75
SWC3	YAL011W	TAH1	P25638	111 aa	Predicted RBP	4.13	□□□□□ -1.75
SWC3	YAL011W	GAR1	P28007	205 aa	Known RBP	4.13	□□□□□ -1.75
SWC3	YAL011W	SPT14	P32363	452 aa		4.13	□□□□□ -1.75
SWC3	YAL011W	APD1	P38281	316 aa		4.13	□□□□□ -1.75
SWC3	YAL011W	MIC12	P38341	106 aa		4.13	□□□□□ -1.75
SWC3	YAL011W	PTC7	P38797	343 aa		4.13	□□□□□ -1.75
SWC3	YAL011W	LNP1	P38878	278 aa		4.13	□□□□□ -1.75
SWC3	YAL011W	YER121W	P40076	114 aa		4.13	□□□□□ -1.75
SWC3	YAL011W	YJL218W	P40892	196 aa	Known RBP	4.13	□□□□□ -1.75
SWC3	YAL011W	IRC7	P43623	340 aa		4.13	□□□□□ -1.75
SWC3	YAL011W	CHA4	P43634	648 aa		4.13	□□□□□ -1.75
SWC3	YAL011W	COX16	P47081	118 aa		4.13	□□□□□ -1.75
SWC3	YAL011W	COQ5	P49017	307 aa		4.13	□□□□□ -1.75
SWC3	YAL011W	DIE2	P50076	525 aa		4.13	□□□□□ -1.75
SWC3	YAL011W	SPT20	P50875	604 aa		4.13	□□□□□ -1.75
SWC3	YAL011W	CDA2	Q06703	312 aa		4.13	□□□□□ -1.75
SWC3	YAL011W	UIP4	Q08926	304 aa		4.13	□□□□□ -1.75
SWC3	YAL011W	MMT2	Q08970	484 aa		4.13	□□□□□ -1.75
SWC3	YAL011W	DAP1	Q12091	152 aa		4.13	□□□□□ -1.75
SWC3	YAL011W	RAS1	P01119	309 aa		4.13	□□□□□ -1.75
SWC3	YAL011W	YPT1	P01123	206 aa	Known RBP	4.13	□□□□□ -1.75
SWC3	YAL011W	HTB1	P02293	131 aa	Known RBP	4.13	□□□□□ -1.75
SWC3	YAL011W	HTB2	P02294	131 aa		4.13	□□□□□ -1.75
SWC3	YAL011W	YOL163W	P0CF20	169 aa		4.13	□□□□□ -1.75
SWC3	YAL011W	SUI1	P32911	108 aa	Known RBP	4.13	□□□□□ -1.75
SWC3	YAL011W	FMP46	P36141	133 aa	Known RBP	4.13	□□□□□ -1.75
SWC3	YAL011W	OMA1	P36163	345 aa		4.13	□□□□□ -1.75
SWC3	YAL011W	OSH7	P38755	437 aa		4.13	□□□□□ -1.75
SWC3	YAL011W	YJR141W	P47172	347 aa	Predicted RBP	4.13	□□□□□ -1.75
SWC3	YAL011W	TOS2	P50078	622 aa		4.13	□□□□□ -1.75
SWC3	YAL011W	ORM1	P53224	222 aa		4.13	□□□□□ -1.75
SWC3	YAL011W	YGR042W	P53227	271 aa		4.13	□□□□□ -1.75
SWC3	YAL011W	YIP3	P53633	176 aa		4.13	□□□□□ -1.75
SWC3	YAL011W	YPL068C	Q02749	293 aa		4.13	□□□□□ -1.75
SWC3	YAL011W	NAT4	Q04751	285 aa		4.13	□□□□□ -1.75
SWC3	YAL011W	ELP6	Q04868	273 aa		4.13	□□□□□ -1.75
SWC3	YAL011W	YLR346C	Q06139	101 aa		4.13	□□□□□ -1.75
SWC3	YAL011W	FDH1	Q08911	376 aa		4.13	□□□□□ -1.75
SWC3	YAL011W	FAS1	P07149	2051 aa	Known RBP	4.12	□□□□□ -1.75
SWC3	YAL011W	YEL009C-A	A0A023PZF2	135 aa		4.12	□□□□□ -1.75
SWC3	YAL011W	COX1	P00401	534 aa		4.12	□□□□□ -1.75
SWC3	YAL011W	RPP2A	P05319	106 aa	Known RBP	4.12	□□□□□ -1.75
SWC3	YAL011W	CAP2	P13517	287 aa		4.12	□□□□□ -1.75
SWC3	YAL011W	RPB5	P20434	215 aa		4.12	□□□□□ -1.75
SWC3	YAL011W	DBF2	P22204	572 aa		4.12	□□□□□ -1.75
SWC3	YAL011W	PPH21	P23594	369 aa		4.12	□□□□□ -1.75
SWC3	YAL011W	YCR100C	P25606	316 aa		4.12	□□□□□ -1.75
SWC3	YAL011W	BUB3	P26449	341 aa		4.12	□□□□□ -1.75
SWC3	YAL011W	YKL162C	P36052	402 aa		4.12	□□□□□ -1.75
SWC3	YAL011W	RPL32	P38061	130 aa	Known RBP	4.12	□□□□□ -1.75
SWC3	YAL011W	SHE1	P38200	338 aa		4.12	□□□□□ -1.75
SWC3	YAL011W	LYS1	P38998	373 aa	RIP-Chip data	4.12	□□□□□ -1.75	not detected
SWC3	YAL011W	BAP3	P41815	604 aa		4.12	□□□□□ -1.75
SWC3	YAL011W	YAE1	P47118	141 aa	Predicted RBP	4.12	□□□□□ -1.75
SWC3	YAL011W	BAT2	P47176	376 aa	Known RBP	4.12	□□□□□ -1.75
SWC3	YAL011W	ARO8	P53090	500 aa	Known RBP	4.12	□□□□□ -1.75
SWC3	YAL011W	MKC7	P53379	596 aa		4.12	□□□□□ -1.75
SWC3	YAL011W	OST6	Q03723	332 aa		4.12	□□□□□ -1.75
SWC3	YAL011W	YPR147C	Q06522	304 aa	Known RBP	4.12	□□□□□ -1.75
SWC3	YAL011W	BER1	Q06688	274 aa	Known RBP	4.12	□□□□□ -1.75
SWC3	YAL011W	IZH3	Q07959	543 aa		4.12	□□□□□ -1.75
SWC3	YAL011W	RRG7	Q08774	242 aa	Predicted RBP	4.12	□□□□□ -1.75
SWC3	YAL011W	SPC3	Q12133	184 aa		4.12	□□□□□ -1.75
SWC3	YAL011W	RNH203	Q12338	110 aa		4.12	□□□□□ -1.75
SWC3	YAL011W	RRI1	Q12468	440 aa		4.12	□□□□□ -1.75
SWC3	YAL011W	SUS1	Q6WNK7	96 aa		4.12	□□□□□ -1.75
SWC3	YAL011W	FSH3	Q99369	266 aa		4.12	□□□□□ -1.75
SWC3	YAL011W	YOL162W	P0CF19	215 aa		4.11	□□□□□ -1.75
SWC3	YAL011W	ERD1	P16151	362 aa		4.11	□□□□□ -1.75
SWC3	YAL011W	SOR1	P35497	357 aa	Known RBP	4.11	□□□□□ -1.75
SWC3	YAL011W	OAR1	P35731	278 aa		4.11	□□□□□ -1.75
SWC3	YAL011W	RPS20	P38701	121 aa	Known RBP	4.11	□□□□□ -1.75
SWC3	YAL011W	ECM34	P38728	170 aa		4.11	□□□□□ -1.75
SWC3	YAL011W	YNL194C	P40169	301 aa		4.11	□□□□□ -1.75
SWC3	YAL011W	TIF34	P40217	347 aa	Known RBP	4.11	□□□□□ -1.75
SWC3	YAL011W	YKE4	P40544	346 aa		4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 78.1 ms