RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 GAD1Q99259 594 aa12.34□□□□□ -0.43
PTP4A1-207ENST00000639568 APOL6Q9BWW8 343 aa12.34□□□□□ -0.43
PTP4A1-207ENST00000639568 TRPV5Q9NQA5 729 aa12.34□□□□□ -0.43
PTP4A1-207ENST00000639568 RBM12Q9NTZ6 932 aaKnown RBP12.34□□□□□ -0.43
PTP4A1-207ENST00000639568 MSRB2Q9Y3D2 182 aa12.34□□□□□ -0.43
PTP4A1-207ENST00000639568 GPSM3Q9Y4H4 160 aa12.34□□□□□ -0.43
PTP4A1-207ENST00000639568 FREM2Q5SZK8 3169 aa12.34□□□□□ -0.43
PTP4A1-207ENST00000639568 SF3B1O75533 1304 aaKnown RBP eCLIP12.34□□□□□ -0.43
PTP4A1-207ENST00000639568 WDR64B1ANS9 1081 aa12.33□□□□□ -0.44
PTP4A1-207ENST00000639568 ZNF263O14978 683 aa12.33□□□□□ -0.44
PTP4A1-207ENST00000639568 HYAL3O43820 417 aaPredicted RBP12.33□□□□□ -0.44
PTP4A1-207ENST00000639568 RHOP08100 348 aa12.33□□□□□ -0.44
PTP4A1-207ENST00000639568 PSMC3P17980 439 aa12.33□□□□□ -0.44
PTP4A1-207ENST00000639568 CSRP1P21291 193 aaKnown RBP12.33□□□□□ -0.44
PTP4A1-207ENST00000639568 SCNN1GP51170 649 aa12.33□□□□□ -0.44
PTP4A1-207ENST00000639568 ADCY7P51828 1080 aa12.33□□□□□ -0.44
PTP4A1-207ENST00000639568 NAPAP54920 295 aa12.33□□□□□ -0.44
PTP4A1-207ENST00000639568 SETQ01105 290 aaPredicted RBP12.33□□□□□ -0.44
PTP4A1-207ENST00000639568 MTERF2Q49AM1 385 aa12.33□□□□□ -0.44
PTP4A1-207ENST00000639568 DGKKQ5KSL6 1271 aa12.33□□□□□ -0.44
PTP4A1-207ENST00000639568 NFXL1Q6ZNB6 911 aa12.33□□□□□ -0.44
PTP4A1-207ENST00000639568 NCOA7Q8NI08 942 aa12.33□□□□□ -0.44
PTP4A1-207ENST00000639568 FAM200AQ8TCP9 573 aa12.33□□□□□ -0.44
PTP4A1-207ENST00000639568 CSGALNACT1Q8TDX6 532 aa12.33□□□□□ -0.44
PTP4A1-207ENST00000639568 MSANTD3Q96H12 275 aa12.33□□□□□ -0.44
PTP4A1-207ENST00000639568 CLSTN3Q9BQT9 956 aa12.33□□□□□ -0.44
PTP4A1-207ENST00000639568 TTPALQ9BTX7 342 aa12.33□□□□□ -0.44
PTP4A1-207ENST00000639568 MKNK1Q9BUB5 465 aa12.33□□□□□ -0.44
PTP4A1-207ENST00000639568 RIC8AQ9NPQ8 531 aa12.33□□□□□ -0.44
PTP4A1-207ENST00000639568 EVPLQ92817 2033 aa12.33□□□□□ -0.44
PTP4A1-207ENST00000639568 LAMA5O15230 3695 aa12.33□□□□□ -0.44
PTP4A1-207ENST00000639568 ZNF862O60290 1169 aa12.32□□□□□ -0.44
PTP4A1-207ENST00000639568 RDXP35241 583 aaKnown RBP12.32□□□□□ -0.44
PTP4A1-207ENST00000639568 KPNA1P52294 538 aaPredicted RBP12.32□□□□□ -0.44
PTP4A1-207ENST00000639568 AP3B2Q13367 1082 aa12.32□□□□□ -0.44
PTP4A1-207ENST00000639568 PSMD5Q16401 504 aa12.32□□□□□ -0.44
PTP4A1-207ENST00000639568 FAM78AQ5JUQ0 283 aa12.32□□□□□ -0.44
PTP4A1-207ENST00000639568 RTP2Q5QGT7 225 aa12.32□□□□□ -0.44
PTP4A1-207ENST00000639568 PDXDC1Q6P996 788 aa12.32□□□□□ -0.44
PTP4A1-207ENST00000639568 Q6ZS52 159 aa12.32□□□□□ -0.44
PTP4A1-207ENST00000639568 RTL10Q7L3V2 364 aa12.32□□□□□ -0.44
PTP4A1-207ENST00000639568 MAP4K3Q8IVH8 894 aa12.32□□□□□ -0.44
PTP4A1-207ENST00000639568 KSR1Q8IVT5 923 aa12.32□□□□□ -0.44
PTP4A1-207ENST00000639568 ZFP42Q96MM3 310 aa12.32□□□□□ -0.44
PTP4A1-207ENST00000639568 DISC1Q9NRI5 854 aa12.32□□□□□ -0.44
PTP4A1-207ENST00000639568 SEPT9Q9UHD8 586 aaPredicted RBP12.32□□□□□ -0.44
PTP4A1-207ENST00000639568 CCDC69A6NI79 296 aa12.31□□□□□ -0.44
PTP4A1-207ENST00000639568 CAVIN2O95810 425 aa12.31□□□□□ -0.44
PTP4A1-207ENST00000639568 CEBPBP17676 345 aa12.31□□□□□ -0.44
PTP4A1-207ENST00000639568 PTPN2P17706 415 aa12.31□□□□□ -0.44
PTP4A1-207ENST00000639568 PXNP49023 591 aaPredicted RBP12.31□□□□□ -0.44
PTP4A1-207ENST00000639568 MLLT6P55198 1093 aaPredicted RBP12.31□□□□□ -0.44
PTP4A1-207ENST00000639568 CREB5Q02930 508 aa12.31□□□□□ -0.44
PTP4A1-207ENST00000639568 NCBP1Q09161 790 aaKnown RBP12.31□□□□□ -0.44
PTP4A1-207ENST00000639568 ELF2Q15723 593 aa12.31□□□□□ -0.44
PTP4A1-207ENST00000639568 SLC5A9Q2M3M2 681 aa12.31□□□□□ -0.44
PTP4A1-207ENST00000639568 COL28A1Q2UY09 1125 aa12.31□□□□□ -0.44
PTP4A1-207ENST00000639568 UBXN11Q5T124 520 aa12.31□□□□□ -0.44
PTP4A1-207ENST00000639568 FAM171A1Q5VUB5 890 aa12.31□□□□□ -0.44
PTP4A1-207ENST00000639568 PROSER1Q86XN7 944 aa12.31□□□□□ -0.44
PTP4A1-207ENST00000639568 HACE1Q8IYU2 909 aa12.31□□□□□ -0.44
PTP4A1-207ENST00000639568 GLIS3Q8NEA6 775 aa12.31□□□□□ -0.44
PTP4A1-207ENST00000639568 IGDCC4Q8TDY8 1250 aa12.31□□□□□ -0.44
PTP4A1-207ENST00000639568 DEPDC1BQ8WUY9 529 aa12.31□□□□□ -0.44
PTP4A1-207ENST00000639568 PIK3R5Q8WYR1 880 aa12.31□□□□□ -0.44
PTP4A1-207ENST00000639568 RABGGTAQ92696 567 aa12.31□□□□□ -0.44
PTP4A1-207ENST00000639568 ZC3H10Q96K80 434 aaKnown RBP12.31□□□□□ -0.44
PTP4A1-207ENST00000639568 GLT8D2Q9H1C3 349 aa12.31□□□□□ -0.44
PTP4A1-207ENST00000639568 SLC32A1Q9H598 525 aa12.31□□□□□ -0.44
PTP4A1-207ENST00000639568 TMEM9BQ9NQ34 198 aa12.31□□□□□ -0.44
PTP4A1-207ENST00000639568 KLK13Q9UKR3 277 aa12.31□□□□□ -0.44
PTP4A1-207ENST00000639568 IPPQ9Y573 584 aa12.31□□□□□ -0.44
PTP4A1-207ENST00000639568 IGLV3-22A0A075B6J6 115 aa12.3□□□□□ -0.44
PTP4A1-207ENST00000639568 CCDC163A0A0D9SF12 145 aa12.3□□□□□ -0.44
PTP4A1-207ENST00000639568 ZNF197O14709 1029 aa12.3□□□□□ -0.44
PTP4A1-207ENST00000639568 AKAP3O75969 853 aa12.3□□□□□ -0.44
PTP4A1-207ENST00000639568 RHOBTB1O94844 696 aa12.3□□□□□ -0.44
PTP4A1-207ENST00000639568 ERLIN2O94905 339 aa12.3□□□□□ -0.44
PTP4A1-207ENST00000639568 CALM1P0DP23 149 aa12.3□□□□□ -0.44
PTP4A1-207ENST00000639568 CALM2P0DP24 149 aa12.3□□□□□ -0.44
PTP4A1-207ENST00000639568 CALM3P0DP25 149 aa12.3□□□□□ -0.44
PTP4A1-207ENST00000639568 FCARP24071 287 aa12.3□□□□□ -0.44
PTP4A1-207ENST00000639568 HOXA11P31270 313 aaPredicted RBP12.3□□□□□ -0.44
PTP4A1-207ENST00000639568 FGD1P98174 961 aa12.3□□□□□ -0.44
PTP4A1-207ENST00000639568 HSP90AA2PQ14568 343 aaPredicted RBP12.3□□□□□ -0.44
PTP4A1-207ENST00000639568 TARBP2Q15633 366 aaKnown RBP12.3□□□□□ -0.44
PTP4A1-207ENST00000639568 WWC2Q6AWC2 1192 aa12.3□□□□□ -0.44
PTP4A1-207ENST00000639568 SRGAP1Q7Z6B7 1085 aa12.3□□□□□ -0.44
PTP4A1-207ENST00000639568 YAF2Q8IY57 180 aa12.3□□□□□ -0.44
PTP4A1-207ENST00000639568 SMG8Q8ND04 991 aaKnown RBP12.3□□□□□ -0.44
PTP4A1-207ENST00000639568 LNX1Q8TBB1 728 aaPredicted RBP12.3□□□□□ -0.44
PTP4A1-207ENST00000639568 JPH2Q9BR39 696 aaPredicted RBP12.3□□□□□ -0.44
PTP4A1-207ENST00000639568 C8orf33Q9H7E9 229 aaPredicted RBP12.3□□□□□ -0.44
PTP4A1-207ENST00000639568 IFT122Q9HBG6 1241 aa12.3□□□□□ -0.44
PTP4A1-207ENST00000639568 C2orf42Q9NWW7 574 aa12.3□□□□□ -0.44
PTP4A1-207ENST00000639568 RCAN3Q9UKA8 241 aa12.3□□□□□ -0.44
PTP4A1-207ENST00000639568 PCDHB15Q9Y5E8 787 aa12.3□□□□□ -0.44
PTP4A1-207ENST00000639568 F5P12259 2224 aa12.3□□□□□ -0.44
PTP4A1-207ENST00000639568 RALGAPA1Q6GYQ0 2036 aa12.3□□□□□ -0.44
PTP4A1-207ENST00000639568 IGKV6-21A0A0C4DH24 114 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms