RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 PSMD6Q15008 389 aa20.19■□□□□ 0.82
SSBP4-212ENST00000601919 TWF2Q6IBS0 349 aaKnown RBP20.19■□□□□ 0.82
SSBP4-212ENST00000601919 CDR2LQ86X02 465 aaPredicted RBP20.19■□□□□ 0.82
SSBP4-212ENST00000601919 BRSK2Q8IWQ3 736 aa20.19■□□□□ 0.82
SSBP4-212ENST00000601919 DRC7Q8IY82 874 aa20.19■□□□□ 0.82
SSBP4-212ENST00000601919 HACE1Q8IYU2 909 aa20.19■□□□□ 0.82
SSBP4-212ENST00000601919 ZSWIM2Q8NEG5 633 aa20.19■□□□□ 0.82
SSBP4-212ENST00000601919 SLC35C1Q96A29 364 aa20.19■□□□□ 0.82
SSBP4-212ENST00000601919 HIPK3Q9H422 1215 aa20.19■□□□□ 0.82
SSBP4-212ENST00000601919 RPF1Q9H9Y2 349 aaKnown RBP20.19■□□□□ 0.82
SSBP4-212ENST00000601919 CPSF3Q9UKF6 684 aaKnown RBP20.19■□□□□ 0.82
SSBP4-212ENST00000601919 PADI3Q9ULW8 664 aa20.19■□□□□ 0.82
SSBP4-212ENST00000601919 GOLGA6L6A8MZA4 724 aa20.18■□□□□ 0.82
SSBP4-212ENST00000601919 FAM189A1O60320 539 aa20.18■□□□□ 0.82
SSBP4-212ENST00000601919 IL18RAPO95256 599 aa20.18■□□□□ 0.82
SSBP4-212ENST00000601919 CLTBP09497 229 aa20.18■□□□□ 0.82
SSBP4-212ENST00000601919 CD52P31358 61 aa20.18■□□□□ 0.82
SSBP4-212ENST00000601919 GTF2H1P32780 548 aa20.18■□□□□ 0.82
SSBP4-212ENST00000601919 GRM5P41594 1212 aa20.18■□□□□ 0.82
SSBP4-212ENST00000601919 CCDC173Q0VFZ6 552 aa20.18■□□□□ 0.82
SSBP4-212ENST00000601919 CETN1Q12798 172 aa20.18■□□□□ 0.82
SSBP4-212ENST00000601919 TRAF7Q6Q0C0 670 aa20.18■□□□□ 0.82
SSBP4-212ENST00000601919 CRELD2Q6UXH1 353 aaPredicted RBP20.18■□□□□ 0.82
SSBP4-212ENST00000601919 PARD3BQ8TEW8 1205 aa20.18■□□□□ 0.82
SSBP4-212ENST00000601919 CCDC127Q96BQ5 260 aa20.18■□□□□ 0.82
SSBP4-212ENST00000601919 AGO3Q9H9G7 860 aaKnown RBP20.18■□□□□ 0.82
SSBP4-212ENST00000601919 TMEM39AQ9NV64 488 aa20.18■□□□□ 0.82
SSBP4-212ENST00000601919 CITO14578 2027 aa20.17■□□□□ 0.82
SSBP4-212ENST00000601919 A0A1W2PQC6 194 aa20.17■□□□□ 0.82
SSBP4-212ENST00000601919 STAG3L1P0CL83 205 aa20.17■□□□□ 0.82
SSBP4-212ENST00000601919 SKIP12755 728 aa20.17■□□□□ 0.82
SSBP4-212ENST00000601919 YARSP54577 528 aaKnown RBP20.17■□□□□ 0.82
SSBP4-212ENST00000601919 LRRC26Q2I0M4 334 aa20.17■□□□□ 0.82
SSBP4-212ENST00000601919 CD302Q8IX05 232 aa20.17■□□□□ 0.82
SSBP4-212ENST00000601919 ACAP3Q96P50 834 aa20.17■□□□□ 0.82
SSBP4-212ENST00000601919 TANC1Q9C0D5 1861 aa20.17■□□□□ 0.82
SSBP4-212ENST00000601919 GTPBP10A4D1E9 387 aaKnown RBP20.16■□□□□ 0.82
SSBP4-212ENST00000601919 TULP1O00294 542 aaPredicted RBP20.16■□□□□ 0.82
SSBP4-212ENST00000601919 P4HA2O15460 535 aa20.16■□□□□ 0.82
SSBP4-212ENST00000601919 EN2P19622 333 aaPredicted RBP20.16■□□□□ 0.82
SSBP4-212ENST00000601919 RAB27AP51159 221 aa20.16■□□□□ 0.82
SSBP4-212ENST00000601919 AP3M2P53677 418 aa20.16■□□□□ 0.82
SSBP4-212ENST00000601919 ZBTB41Q5SVQ8 909 aa20.16■□□□□ 0.82
SSBP4-212ENST00000601919 VSTM4Q8IW00 320 aa20.16■□□□□ 0.82
SSBP4-212ENST00000601919 ERGIC2Q96RQ1 377 aa20.16■□□□□ 0.82
SSBP4-212ENST00000601919 FTHL17Q9BXU8 183 aa20.16■□□□□ 0.82
SSBP4-212ENST00000601919 IFIH1Q9BYX4 1025 aaKnown RBP20.16■□□□□ 0.82
SSBP4-212ENST00000601919 PLEKHA5Q9HAU0 1116 aa20.16■□□□□ 0.82
SSBP4-212ENST00000601919 TOPORSQ9NS56 1045 aaPredicted RBP20.16■□□□□ 0.82
SSBP4-212ENST00000601919 INTS13Q9NVM9 706 aa20.16■□□□□ 0.82
SSBP4-212ENST00000601919 TBX21Q9UL17 535 aa20.16■□□□□ 0.82
SSBP4-212ENST00000601919 TEX33O43247 280 aa20.15■□□□□ 0.82
SSBP4-212ENST00000601919 TRIM49P0CI25 452 aa20.15■□□□□ 0.82
SSBP4-212ENST00000601919 TRIM49CP0CI26 452 aa20.15■□□□□ 0.82
SSBP4-212ENST00000601919 DLATP10515 647 aaKnown RBP20.15■□□□□ 0.82
SSBP4-212ENST00000601919 TNNI1P19237 187 aa20.15■□□□□ 0.82
SSBP4-212ENST00000601919 TNFSF9P41273 254 aa20.15■□□□□ 0.82
SSBP4-212ENST00000601919 FMO5P49326 533 aa20.15■□□□□ 0.82
SSBP4-212ENST00000601919 OSTNP61366 133 aa20.15■□□□□ 0.82
SSBP4-212ENST00000601919 CLDN10P78369 228 aa20.15■□□□□ 0.82
SSBP4-212ENST00000601919 ENOX2Q16206 610 aaKnown RBP20.15■□□□□ 0.82
SSBP4-212ENST00000601919 SEZ6Q53EL9 994 aa20.15■□□□□ 0.82
SSBP4-212ENST00000601919 SPECC1LQ69YQ0 1117 aa20.15■□□□□ 0.82
SSBP4-212ENST00000601919 APBB2Q92870 758 aa20.15■□□□□ 0.82
SSBP4-212ENST00000601919 IQCDQ96DY2 449 aa20.15■□□□□ 0.82
SSBP4-212ENST00000601919 PCMTD1Q96MG8 357 aaPredicted RBP20.15■□□□□ 0.82
SSBP4-212ENST00000601919 CGRRF1Q99675 332 aa20.15■□□□□ 0.82
SSBP4-212ENST00000601919 TRAIPQ9BWF2 469 aa20.15■□□□□ 0.82
SSBP4-212ENST00000601919 EIF2AQ9BY44 585 aaKnown RBP20.15■□□□□ 0.82
SSBP4-212ENST00000601919 ASB7Q9H672 318 aa20.15■□□□□ 0.82
SSBP4-212ENST00000601919 ITIH6Q6UXX5 1313 aa20.15■□□□□ 0.82
SSBP4-212ENST00000601919 ANK1P16157 1881 aa20.14■□□□□ 0.81
SSBP4-212ENST00000601919 RALGAPA2Q2PPJ7 1873 aa20.14■□□□□ 0.81
SSBP4-212ENST00000601919 PMM2O15305 246 aa20.14■□□□□ 0.81
SSBP4-212ENST00000601919 MYL7Q01449 175 aa20.14■□□□□ 0.81
SSBP4-212ENST00000601919 UBXN11Q5T124 520 aa20.14■□□□□ 0.81
SSBP4-212ENST00000601919 KRT39Q6A163 491 aa20.14■□□□□ 0.81
SSBP4-212ENST00000601919 GBP6Q6ZN66 633 aa20.14■□□□□ 0.81
SSBP4-212ENST00000601919 UBE2Q1Q7Z7E8 422 aa20.14■□□□□ 0.81
SSBP4-212ENST00000601919 WDR49Q8IV35 697 aa20.14■□□□□ 0.81
SSBP4-212ENST00000601919 CEP120Q8N960 986 aa20.14■□□□□ 0.81
SSBP4-212ENST00000601919 SEPT8Q92599 483 aa20.14■□□□□ 0.81
SSBP4-212ENST00000601919 FAM212AQ96EL1 285 aa20.14■□□□□ 0.81
SSBP4-212ENST00000601919 PDLIM2Q96JY6 352 aa20.14■□□□□ 0.81
SSBP4-212ENST00000601919 TSPAN18Q96SJ8 248 aa20.14■□□□□ 0.81
SSBP4-212ENST00000601919 TMEM8AQ9HCN3 771 aa20.14■□□□□ 0.81
SSBP4-212ENST00000601919 PDE11AQ9HCR9 933 aa20.14■□□□□ 0.81
SSBP4-212ENST00000601919 FAM105AQ9NUU6 356 aa20.14■□□□□ 0.81
SSBP4-212ENST00000601919 IMPACTQ9P2X3 320 aa20.14■□□□□ 0.81
SSBP4-212ENST00000601919 PCDHB2Q9Y5E7 798 aa20.14■□□□□ 0.81
SSBP4-212ENST00000601919 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.14■□□□□ 0.81
SSBP4-212ENST00000601919 LRRIQ3A6PVS8 624 aaPredicted RBP20.13■□□□□ 0.81
SSBP4-212ENST00000601919 TPM1P09493 284 aa20.13■□□□□ 0.81
SSBP4-212ENST00000601919 CXCL8P10145 99 aa20.13■□□□□ 0.81
SSBP4-212ENST00000601919 RFC2P35250 354 aa20.13■□□□□ 0.81
SSBP4-212ENST00000601919 PBX1P40424 430 aa20.13■□□□□ 0.81
SSBP4-212ENST00000601919 MXI1P50539 228 aa20.13■□□□□ 0.81
SSBP4-212ENST00000601919 DLG4P78352 724 aa20.13■□□□□ 0.81
SSBP4-212ENST00000601919 TRIM14Q14142 442 aa20.13■□□□□ 0.81
SSBP4-212ENST00000601919 DSC3Q14574 896 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms