RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 DLC1Q96QB1 1528 aa4.87□□□□□ -1.63
CKS1BP3-201ENST00000600888 ADGRB1O14514 1584 aa4.87□□□□□ -1.63
CKS1BP3-201ENST00000600888 COL22A1Q8NFW1 1626 aaPredicted RBP4.86□□□□□ -1.63
CKS1BP3-201ENST00000600888 KIF1AQ12756 1690 aa4.86□□□□□ -1.63
CKS1BP3-201ENST00000600888 K7ESM1 405 aa4.86□□□□□ -1.63
CKS1BP3-201ENST00000600888 SLC26A4O43511 780 aa4.86□□□□□ -1.63
CKS1BP3-201ENST00000600888 NRP2O60462 931 aa4.86□□□□□ -1.63
CKS1BP3-201ENST00000600888 CDC14BO60729 498 aa4.86□□□□□ -1.63
CKS1BP3-201ENST00000600888 SEC24DO94855 1032 aaPredicted RBP4.86□□□□□ -1.63
CKS1BP3-201ENST00000600888 GAAP10253 952 aa4.86□□□□□ -1.63
CKS1BP3-201ENST00000600888 GPR3P46089 330 aa4.86□□□□□ -1.63
CKS1BP3-201ENST00000600888 GUCY2FP51841 1108 aa4.86□□□□□ -1.63
CKS1BP3-201ENST00000600888 BPIFB4P59827 614 aa4.86□□□□□ -1.63
CKS1BP3-201ENST00000600888 TCIRG1Q13488 830 aa4.86□□□□□ -1.63
CKS1BP3-201ENST00000600888 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.86□□□□□ -1.63
CKS1BP3-201ENST00000600888 TCTN3Q6NUS6 607 aa4.86□□□□□ -1.63
CKS1BP3-201ENST00000600888 GIMAP8Q8ND71 665 aaPredicted RBP4.86□□□□□ -1.63
CKS1BP3-201ENST00000600888 TGFBRAP1Q8WUH2 860 aa4.86□□□□□ -1.63
CKS1BP3-201ENST00000600888 RABGGTAQ92696 567 aa4.86□□□□□ -1.63
CKS1BP3-201ENST00000600888 RAX2Q96IS3 184 aa4.86□□□□□ -1.63
CKS1BP3-201ENST00000600888 RPL10LQ96L21 214 aaKnown RBP4.86□□□□□ -1.63
CKS1BP3-201ENST00000600888 MENTQ9BUN1 341 aa4.86□□□□□ -1.63
CKS1BP3-201ENST00000600888 CDY2AQ9Y6F7 541 aa4.86□□□□□ -1.63
CKS1BP3-201ENST00000600888 ADGRB2O60241 1585 aa4.86□□□□□ -1.63
CKS1BP3-201ENST00000600888 ARHGEF28Q8N1W1 1705 aaKnown RBP4.86□□□□□ -1.63
CKS1BP3-201ENST00000600888 KRTAP9-7A8MTY7 169 aa4.85□□□□□ -1.63
CKS1BP3-201ENST00000600888 ALG1L2C9J202 215 aa4.85□□□□□ -1.63
CKS1BP3-201ENST00000600888 LY86O95711 162 aa4.85□□□□□ -1.63
CKS1BP3-201ENST00000600888 IBSPP21815 317 aaPredicted RBP4.85□□□□□ -1.63
CKS1BP3-201ENST00000600888 KIR2DL3P43628 341 aa4.85□□□□□ -1.63
CKS1BP3-201ENST00000600888 NRG3P56975 720 aa4.85□□□□□ -1.63
CKS1BP3-201ENST00000600888 MRPS9P82933 396 aaKnown RBP4.85□□□□□ -1.63
CKS1BP3-201ENST00000600888 DUSP8Q13202 625 aa4.85□□□□□ -1.63
CKS1BP3-201ENST00000600888 LMBR1LQ6UX01 489 aa4.85□□□□□ -1.63
CKS1BP3-201ENST00000600888 GPR135Q8IZ08 494 aa4.85□□□□□ -1.63
CKS1BP3-201ENST00000600888 UNC5BQ8IZJ1 945 aa4.85□□□□□ -1.63
CKS1BP3-201ENST00000600888 ANKRD53Q8N9V6 530 aa4.85□□□□□ -1.63
CKS1BP3-201ENST00000600888 PIK3C3Q8NEB9 887 aa4.85□□□□□ -1.63
CKS1BP3-201ENST00000600888 SHCBP1Q8NEM2 672 aa4.85□□□□□ -1.63
CKS1BP3-201ENST00000600888 DNERQ8NFT8 737 aa4.85□□□□□ -1.63
CKS1BP3-201ENST00000600888 LRRC59Q96AG4 307 aaKnown RBP4.85□□□□□ -1.63
CKS1BP3-201ENST00000600888 LOXL4Q96JB6 756 aa4.85□□□□□ -1.63
CKS1BP3-201ENST00000600888 SAMD11Q96NU1 681 aa4.85□□□□□ -1.63
CKS1BP3-201ENST00000600888 UIMC1Q96RL1 719 aa4.85□□□□□ -1.63
CKS1BP3-201ENST00000600888 AGO3Q9H9G7 860 aaKnown RBP4.85□□□□□ -1.63
CKS1BP3-201ENST00000600888 MSL2Q9HCI7 577 aa4.85□□□□□ -1.63
CKS1BP3-201ENST00000600888 RGS17Q9UGC6 210 aaPredicted RBP4.85□□□□□ -1.63
CKS1BP3-201ENST00000600888 DPP7Q9UHL4 492 aa4.85□□□□□ -1.63
CKS1BP3-201ENST00000600888 ZFR2Q9UPR6 939 aaKnown RBP4.85□□□□□ -1.63
CKS1BP3-201ENST00000600888 NOP58Q9Y2X3 529 aaKnown RBP4.85□□□□□ -1.63
CKS1BP3-201ENST00000600888 DHX57Q6P158 1386 aaKnown RBP4.85□□□□□ -1.63
CKS1BP3-201ENST00000600888 ITSN1Q15811 1721 aa4.84□□□□□ -1.63
CKS1BP3-201ENST00000600888 LRP6O75581 1613 aa4.84□□□□□ -1.63
CKS1BP3-201ENST00000600888 WASHC2AQ641Q2 1341 aa4.84□□□□□ -1.63
CKS1BP3-201ENST00000600888 A0A1W2PR48 441 aa4.84□□□□□ -1.63
CKS1BP3-201ENST00000600888 PATE3B3GLJ2 98 aa4.84□□□□□ -1.63
CKS1BP3-201ENST00000600888 FOXS1O43638 330 aa4.84□□□□□ -1.63
CKS1BP3-201ENST00000600888 KATNA1O75449 491 aa4.84□□□□□ -1.63
CKS1BP3-201ENST00000600888 TOX4O94842 621 aa4.84□□□□□ -1.63
CKS1BP3-201ENST00000600888 JUNP05412 331 aaKnown RBP4.84□□□□□ -1.63
CKS1BP3-201ENST00000600888 VSIG10L2P0DP72 767 aa4.84□□□□□ -1.63
CKS1BP3-201ENST00000600888 MTHFD2P13995 350 aa4.84□□□□□ -1.63
CKS1BP3-201ENST00000600888 RPS19P39019 145 aaKnown RBP4.84□□□□□ -1.63
CKS1BP3-201ENST00000600888 ADAM8P78325 824 aa4.84□□□□□ -1.63
CKS1BP3-201ENST00000600888 CDK17Q00537 523 aa4.84□□□□□ -1.63
CKS1BP3-201ENST00000600888 ITKQ08881 620 aa4.84□□□□□ -1.63
CKS1BP3-201ENST00000600888 MGAT5Q09328 741 aa4.84□□□□□ -1.63
CKS1BP3-201ENST00000600888 KLF1Q13351 362 aaPredicted RBP4.84□□□□□ -1.63
CKS1BP3-201ENST00000600888 MTMR1Q13613 665 aa4.84□□□□□ -1.63
CKS1BP3-201ENST00000600888 RIN1Q13671 783 aa4.84□□□□□ -1.63
CKS1BP3-201ENST00000600888 SAFB2Q14151 953 aaKnown RBP eCLIP4.84□□□□□ -1.63
CKS1BP3-201ENST00000600888 SPIDRQ14159 915 aa4.84□□□□□ -1.63
CKS1BP3-201ENST00000600888 ICAM4Q14773 271 aa4.84□□□□□ -1.63
CKS1BP3-201ENST00000600888 INAVAQ3KP66 663 aa4.84□□□□□ -1.63
CKS1BP3-201ENST00000600888 GAGE13Q4V321 117 aa4.84□□□□□ -1.63
CKS1BP3-201ENST00000600888 TOR2AQ5JU69 321 aa4.84□□□□□ -1.63
CKS1BP3-201ENST00000600888 KCNK18Q7Z418 384 aa4.84□□□□□ -1.63
CKS1BP3-201ENST00000600888 GLB1L2Q8IW92 636 aa4.84□□□□□ -1.63
CKS1BP3-201ENST00000600888 Q8TCH9 128 aa4.84□□□□□ -1.63
CKS1BP3-201ENST00000600888 GPHA2Q96T91 129 aa4.84□□□□□ -1.63
CKS1BP3-201ENST00000600888 PLA2G12BQ9BX93 195 aa4.84□□□□□ -1.63
CKS1BP3-201ENST00000600888 QRSL1Q9H0R6 528 aaKnown RBP4.84□□□□□ -1.63
CKS1BP3-201ENST00000600888 CCDC8Q9H0W5 538 aaPredicted RBP4.84□□□□□ -1.63
CKS1BP3-201ENST00000600888 NELFAQ9H3P2 528 aa4.84□□□□□ -1.63
CKS1BP3-201ENST00000600888 ING3Q9NXR8 418 aa4.84□□□□□ -1.63
CKS1BP3-201ENST00000600888 USP32Q8NFA0 1604 aa4.83□□□□□ -1.64
CKS1BP3-201ENST00000600888 ZNF623O75123 536 aa4.83□□□□□ -1.64
CKS1BP3-201ENST00000600888 RAD17O75943 681 aa4.83□□□□□ -1.64
CKS1BP3-201ENST00000600888 ALDH1A2O94788 518 aa4.83□□□□□ -1.64
CKS1BP3-201ENST00000600888 SRSF2Q01130 221 aaKnown RBP4.83□□□□□ -1.64
CKS1BP3-201ENST00000600888 MUM1Q2TAK8 710 aa4.83□□□□□ -1.64
CKS1BP3-201ENST00000600888 KRT40Q6A162 431 aa4.83□□□□□ -1.64
CKS1BP3-201ENST00000600888 TAS1R1Q7RTX1 841 aa4.83□□□□□ -1.64
CKS1BP3-201ENST00000600888 ADGRE4PQ86SQ3 457 aa4.83□□□□□ -1.64
CKS1BP3-201ENST00000600888 FUKQ8N0W3 1084 aa4.83□□□□□ -1.64
CKS1BP3-201ENST00000600888 CBARPQ8N350 705 aaPredicted RBP4.83□□□□□ -1.64
CKS1BP3-201ENST00000600888 AUTS2Q8WXX7 1259 aa4.83□□□□□ -1.64
CKS1BP3-201ENST00000600888 OR14A2Q96R54 314 aa4.83□□□□□ -1.64
CKS1BP3-201ENST00000600888 CD248Q9HCU0 757 aa4.83□□□□□ -1.64
CKS1BP3-201ENST00000600888 CCM2LQ9NUG4 571 aaPredicted RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms