RNA–Protein interactions for RNA: ENST00000595974.5

TRIM28-206, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-206ENST00000595974 IRAK3Q9Y616 596 aa17.79■□□□□ 0.44
TRIM28-206ENST00000595974 C2orf71A6NGG8 1288 aa17.78■□□□□ 0.44
TRIM28-206ENST00000595974 PER2O15055 1255 aa17.78■□□□□ 0.44
TRIM28-206ENST00000595974 BRD1O95696 1058 aa17.78■□□□□ 0.44
TRIM28-206ENST00000595974 CTSAP10619 480 aa17.78■□□□□ 0.44
TRIM28-206ENST00000595974 PROZP22891 400 aa17.78■□□□□ 0.44
TRIM28-206ENST00000595974 ABCD1P33897 745 aa17.78■□□□□ 0.44
TRIM28-206ENST00000595974 GRM5P41594 1212 aa17.78■□□□□ 0.44
TRIM28-206ENST00000595974 PKP1Q13835 747 aa17.78■□□□□ 0.44
TRIM28-206ENST00000595974 MPZL3Q6UWV2 235 aa17.78■□□□□ 0.44
TRIM28-206ENST00000595974 ZPBP2Q6X784 338 aa17.78■□□□□ 0.44
TRIM28-206ENST00000595974 MYCT1Q8N699 235 aa17.78■□□□□ 0.44
TRIM28-206ENST00000595974 CCDC94Q9BW85 323 aaPredicted RBP17.78■□□□□ 0.44
TRIM28-206ENST00000595974 VN1R3Q9BXE9 311 aa17.78■□□□□ 0.44
TRIM28-206ENST00000595974 MARCH5Q9NX47 278 aa17.78■□□□□ 0.44
TRIM28-206ENST00000595974 TFIP11Q9UBB9 837 aaKnown RBP17.78■□□□□ 0.44
TRIM28-206ENST00000595974 CD207Q9UJ71 328 aa17.78■□□□□ 0.44
TRIM28-206ENST00000595974 GDAQ9Y2T3 454 aa17.78■□□□□ 0.44
TRIM28-206ENST00000595974 PRG3Q9Y2Y8 225 aaPredicted RBP17.78■□□□□ 0.44
TRIM28-206ENST00000595974 TCHHQ07283 1943 aa17.78■□□□□ 0.44
TRIM28-206ENST00000595974 BDP1A6H8Y1 2624 aa17.77■□□□□ 0.44
TRIM28-206ENST00000595974 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.77■□□□□ 0.44
TRIM28-206ENST00000595974 GRXCR2A6NFK2 248 aa17.77■□□□□ 0.44
TRIM28-206ENST00000595974 K7ENM7 598 aa17.77■□□□□ 0.44
TRIM28-206ENST00000595974 ABLIM1O14639 778 aa17.77■□□□□ 0.44
TRIM28-206ENST00000595974 PTGESO14684 152 aa17.77■□□□□ 0.44
TRIM28-206ENST00000595974 TOM1L1O75674 476 aa17.77■□□□□ 0.44
TRIM28-206ENST00000595974 THP07101 528 aa17.77■□□□□ 0.44
TRIM28-206ENST00000595974 MCF2P10911 925 aa17.77■□□□□ 0.44
TRIM28-206ENST00000595974 CA8P35219 290 aa17.77■□□□□ 0.44
TRIM28-206ENST00000595974 STAT6P42226 847 aa17.77■□□□□ 0.44
TRIM28-206ENST00000595974 TUSC3Q13454 348 aa17.77■□□□□ 0.44
TRIM28-206ENST00000595974 SMAD4Q13485 552 aaKnown RBP17.77■□□□□ 0.44
TRIM28-206ENST00000595974 HAUS6Q7Z4H7 955 aa17.77■□□□□ 0.44
TRIM28-206ENST00000595974 KCNG4Q8TDN1 519 aa17.77■□□□□ 0.44
TRIM28-206ENST00000595974 MSLNLQ96KJ4 702 aa17.77■□□□□ 0.44
TRIM28-206ENST00000595974 HERC2P3Q9BVR0 1158 aa17.77■□□□□ 0.44
TRIM28-206ENST00000595974 COLEC11Q9BWP8 271 aa17.77■□□□□ 0.44
TRIM28-206ENST00000595974 TOPORSQ9NS56 1045 aaPredicted RBP17.77■□□□□ 0.44
TRIM28-206ENST00000595974 CLEC1BQ9P126 229 aa17.77■□□□□ 0.44
TRIM28-206ENST00000595974 TRAK2O60296 914 aa17.76■□□□□ 0.43
TRIM28-206ENST00000595974 CUTAO60888 179 aa17.76■□□□□ 0.43
TRIM28-206ENST00000595974 CXCL14O95715 111 aa17.76■□□□□ 0.43
TRIM28-206ENST00000595974 SOD2P04179 222 aa17.76■□□□□ 0.43
TRIM28-206ENST00000595974 IL9P15248 144 aa17.76■□□□□ 0.43
TRIM28-206ENST00000595974 YARSP54577 528 aaKnown RBP17.76■□□□□ 0.43
TRIM28-206ENST00000595974 COASYQ13057 564 aa17.76■□□□□ 0.43
TRIM28-206ENST00000595974 KCNC3Q14003 757 aa17.76■□□□□ 0.43
TRIM28-206ENST00000595974 NOLC1Q14978 699 aaKnown RBP eCLIP17.76■□□□□ 0.43
TRIM28-206ENST00000595974 PTPN14Q15678 1187 aa17.76■□□□□ 0.43
TRIM28-206ENST00000595974 TMEM184AQ6ZMB5 413 aa17.76■□□□□ 0.43
TRIM28-206ENST00000595974 SV2BQ7L1I2 683 aa17.76■□□□□ 0.43
TRIM28-206ENST00000595974 RNF168Q8IYW5 571 aaPredicted RBP17.76■□□□□ 0.43
TRIM28-206ENST00000595974 CEP120Q8N960 986 aa17.76■□□□□ 0.43
TRIM28-206ENST00000595974 SMRP1Q8NCR6 262 aa17.76■□□□□ 0.43
TRIM28-206ENST00000595974 VN1R2Q8NFZ6 395 aa17.76■□□□□ 0.43
TRIM28-206ENST00000595974 NECAB3Q96P71 396 aaPredicted RBP17.76■□□□□ 0.43
TRIM28-206ENST00000595974 TCHPQ9BT92 498 aa17.76■□□□□ 0.43
TRIM28-206ENST00000595974 ZHX3Q9H4I2 956 aa17.76■□□□□ 0.43
TRIM28-206ENST00000595974 BARX2Q9UMQ3 279 aaPredicted RBP17.76■□□□□ 0.43
TRIM28-206ENST00000595974 C5orf42Q9H799 3197 aa17.75■□□□□ 0.43
TRIM28-206ENST00000595974 A0A087X0B3 334 aa17.75■□□□□ 0.43
TRIM28-206ENST00000595974 TNFRSF10AO00220 468 aa17.75■□□□□ 0.43
TRIM28-206ENST00000595974 MBTPS2O43462 519 aa17.75■□□□□ 0.43
TRIM28-206ENST00000595974 EFEMP2O95967 443 aa17.75■□□□□ 0.43
TRIM28-206ENST00000595974 URODP06132 367 aa17.75■□□□□ 0.43
TRIM28-206ENST00000595974 NAB2Q15742 525 aa17.75■□□□□ 0.43
TRIM28-206ENST00000595974 CLUL1Q15846 466 aa17.75■□□□□ 0.43
TRIM28-206ENST00000595974 ZBTB33Q86T24 672 aa17.75■□□□□ 0.43
TRIM28-206ENST00000595974 FAM178BQ8IXR5 827 aa17.75■□□□□ 0.43
TRIM28-206ENST00000595974 AUTS2Q8WXX7 1259 aa17.75■□□□□ 0.43
TRIM28-206ENST00000595974 DDX12PQ92771 950 aa17.75■□□□□ 0.43
TRIM28-206ENST00000595974 BICD1Q96G01 975 aa17.75■□□□□ 0.43
TRIM28-206ENST00000595974 FIZ1Q96SL8 496 aa17.75■□□□□ 0.43
TRIM28-206ENST00000595974 ANKFY1Q9P2R3 1169 aa17.75■□□□□ 0.43
TRIM28-206ENST00000595974 SEL1LQ9UBV2 794 aa17.75■□□□□ 0.43
TRIM28-206ENST00000595974 CFAP45Q9UL16 551 aa17.75■□□□□ 0.43
TRIM28-206ENST00000595974 TBX20Q9UMR3 447 aa17.75■□□□□ 0.43
TRIM28-206ENST00000595974 SSX2IPQ9Y2D8 614 aa17.75■□□□□ 0.43
TRIM28-206ENST00000595974 VWA8A3KMH1 1905 aa17.74■□□□□ 0.43
TRIM28-206ENST00000595974 CLDN3O15551 220 aa17.74■□□□□ 0.43
TRIM28-206ENST00000595974 CLASP2O75122 1294 aaKnown RBP17.74■□□□□ 0.43
TRIM28-206ENST00000595974 PIGRP01833 764 aa17.74■□□□□ 0.43
TRIM28-206ENST00000595974 MCL1Q07820 350 aa17.74■□□□□ 0.43
TRIM28-206ENST00000595974 HSP90AA2PQ14568 343 aaPredicted RBP17.74■□□□□ 0.43
TRIM28-206ENST00000595974 FOXD4L6Q3SYB3 417 aaPredicted RBP17.74■□□□□ 0.43
TRIM28-206ENST00000595974 FUT10Q6P4F1 479 aa17.74■□□□□ 0.43
TRIM28-206ENST00000595974 FOXD4L3Q6VB84 417 aaPredicted RBP17.74■□□□□ 0.43
TRIM28-206ENST00000595974 DYMQ7RTS9 669 aa17.74■□□□□ 0.43
TRIM28-206ENST00000595974 TMEM87AQ8NBN3 555 aa17.74■□□□□ 0.43
TRIM28-206ENST00000595974 CASP10Q92851 521 aa17.74■□□□□ 0.43
TRIM28-206ENST00000595974 PPP1R10Q96QC0 940 aaKnown RBP17.74■□□□□ 0.43
TRIM28-206ENST00000595974 CUEDC2Q9H467 287 aa17.74■□□□□ 0.43
TRIM28-206ENST00000595974 ST6GALNAC4Q9H4F1 302 aa17.74■□□□□ 0.43
TRIM28-206ENST00000595974 MRPL17Q9NRX2 175 aaKnown RBP17.74■□□□□ 0.43
TRIM28-206ENST00000595974 PRKAG3Q9UGI9 489 aa17.74■□□□□ 0.43
TRIM28-206ENST00000595974 ADAM28Q9UKQ2 775 aa17.74■□□□□ 0.43
TRIM28-206ENST00000595974 HCFC2Q9Y5Z7 792 aa17.74■□□□□ 0.43
TRIM28-206ENST00000595974 PLXNA3P51805 1871 aa17.73■□□□□ 0.43
TRIM28-206ENST00000595974 MTCL1Q9Y4B5 1905 aaKnown RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms