RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 LILRA6Q6PI73 481 aa19.4■□□□□ 0.7
SHKBP1-203ENST00000594298 PPP4R3CPQ6ZMV5 832 aa19.4■□□□□ 0.7
SHKBP1-203ENST00000594298 ASCL5Q7RTU5 278 aa19.4■□□□□ 0.7
SHKBP1-203ENST00000594298 PIGOQ8TEQ8 1089 aa19.4■□□□□ 0.7
SHKBP1-203ENST00000594298 SMG7Q92540 1137 aaKnown RBP19.4■□□□□ 0.7
SHKBP1-203ENST00000594298 NXPE3Q969Y0 559 aa19.4■□□□□ 0.7
SHKBP1-203ENST00000594298 ZNF707Q96C28 371 aaPredicted RBP19.4■□□□□ 0.7
SHKBP1-203ENST00000594298 PRIMPOLQ96LW4 560 aa19.4■□□□□ 0.7
SHKBP1-203ENST00000594298 WNT16Q9UBV4 365 aa19.4■□□□□ 0.7
SHKBP1-203ENST00000594298 ADAM28Q9UKQ2 775 aa19.4■□□□□ 0.7
SHKBP1-203ENST00000594298 FBXL21Q9UKT6 434 aa19.4■□□□□ 0.7
SHKBP1-203ENST00000594298 MYO10Q9HD67 2058 aa19.4■□□□□ 0.7
SHKBP1-203ENST00000594298 PRR23AA6NEV1 266 aa19.39■□□□□ 0.69
SHKBP1-203ENST00000594298 WNT7AO00755 349 aa19.39■□□□□ 0.69
SHKBP1-203ENST00000594298 TGM5O43548 720 aa19.39■□□□□ 0.69
SHKBP1-203ENST00000594298 RFPL2O75678 378 aa19.39■□□□□ 0.69
SHKBP1-203ENST00000594298 NPTXRO95502 500 aa19.39■□□□□ 0.69
SHKBP1-203ENST00000594298 CDCA2Q69YH5 1023 aaPredicted RBP19.39■□□□□ 0.69
SHKBP1-203ENST00000594298 CCDC105Q8IYK2 499 aa19.39■□□□□ 0.69
SHKBP1-203ENST00000594298 SIX5Q8N196 739 aa19.39■□□□□ 0.69
SHKBP1-203ENST00000594298 RTP3Q9BQQ7 232 aa19.39■□□□□ 0.69
SHKBP1-203ENST00000594298 NT5C3AQ9H0P0 336 aa19.39■□□□□ 0.69
SHKBP1-203ENST00000594298 TMEM60Q9H2L4 133 aa19.39■□□□□ 0.69
SHKBP1-203ENST00000594298 PLXNA3P51805 1871 aa19.39■□□□□ 0.69
SHKBP1-203ENST00000594298 LAD1O00515 517 aa19.38■□□□□ 0.69
SHKBP1-203ENST00000594298 PI15O43692 258 aa19.38■□□□□ 0.69
SHKBP1-203ENST00000594298 USO1O60763 962 aaKnown RBP19.38■□□□□ 0.69
SHKBP1-203ENST00000594298 HSP90AA1P07900 732 aaKnown RBP19.38■□□□□ 0.69
SHKBP1-203ENST00000594298 SPATA31C1P0DKV0 1188 aa19.38■□□□□ 0.69
SHKBP1-203ENST00000594298 GBP2P32456 591 aaPredicted RBP19.38■□□□□ 0.69
SHKBP1-203ENST00000594298 FAM187BQ17R55 369 aa19.38■□□□□ 0.69
SHKBP1-203ENST00000594298 CDR2LQ86X02 465 aaPredicted RBP19.38■□□□□ 0.69
SHKBP1-203ENST00000594298 PALB2Q86YC2 1186 aa19.38■□□□□ 0.69
SHKBP1-203ENST00000594298 MCPH1Q8NEM0 835 aa19.38■□□□□ 0.69
SHKBP1-203ENST00000594298 B3GALT6Q96L58 329 aa19.38■□□□□ 0.69
SHKBP1-203ENST00000594298 MYADMQ96S97 322 aa19.38■□□□□ 0.69
SHKBP1-203ENST00000594298 PRKD2Q9BZL6 878 aa19.38■□□□□ 0.69
SHKBP1-203ENST00000594298 FZD8Q9H461 694 aa19.38■□□□□ 0.69
SHKBP1-203ENST00000594298 TUFT1Q9NNX1 390 aa19.38■□□□□ 0.69
SHKBP1-203ENST00000594298 PRMT7Q9NVM4 692 aaPredicted RBP19.38■□□□□ 0.69
SHKBP1-203ENST00000594298 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.38■□□□□ 0.691e-8■■■■■ 45.1
SHKBP1-203ENST00000594298 SF3B1O75533 1304 aaKnown RBP eCLIP19.37■□□□□ 0.69
SHKBP1-203ENST00000594298 POTEMA6NI47 508 aa19.37■□□□□ 0.69
SHKBP1-203ENST00000594298 NARSO43776 548 aaKnown RBP19.37■□□□□ 0.69
SHKBP1-203ENST00000594298 SPATA31D3P0C874 917 aa19.37■□□□□ 0.69
SHKBP1-203ENST00000594298 TUSC3Q13454 348 aa19.37■□□□□ 0.69
SHKBP1-203ENST00000594298 SPATA31D4Q6ZUB0 917 aa19.37■□□□□ 0.69
SHKBP1-203ENST00000594298 BRAPQ7Z569 592 aa19.37■□□□□ 0.69
SHKBP1-203ENST00000594298 SLC44A3Q8N4M1 653 aa19.37■□□□□ 0.69
SHKBP1-203ENST00000594298 ERMNQ8TAM6 284 aa19.37■□□□□ 0.69
SHKBP1-203ENST00000594298 RSAD2Q8WXG1 361 aa19.37■□□□□ 0.69
SHKBP1-203ENST00000594298 RIN2Q8WYP3 895 aaPredicted RBP19.37■□□□□ 0.69
SHKBP1-203ENST00000594298 RAB34Q9BZG1 259 aa19.37■□□□□ 0.69
SHKBP1-203ENST00000594298 GPRC5CQ9NQ84 441 aa19.37■□□□□ 0.69
SHKBP1-203ENST00000594298 KLK14Q9P0G3 267 aa19.37■□□□□ 0.69
SHKBP1-203ENST00000594298 PARP2Q9UGN5 583 aa19.37■□□□□ 0.69
SHKBP1-203ENST00000594298 STK24Q9Y6E0 443 aa19.37■□□□□ 0.69
SHKBP1-203ENST00000594298 C2orf16Q68DN1 1984 aa19.37■□□□□ 0.69
SHKBP1-203ENST00000594298 A0A087WWV3 80 aa19.36■□□□□ 0.69
SHKBP1-203ENST00000594298 VPS37CA5D8V6 355 aaPredicted RBP19.36■□□□□ 0.69
SHKBP1-203ENST00000594298 LRRIQ4A6NIV6 560 aa19.36■□□□□ 0.69
SHKBP1-203ENST00000594298 TADA2AO75478 443 aa19.36■□□□□ 0.69
SHKBP1-203ENST00000594298 MYBP10242 640 aa19.36■□□□□ 0.69
SHKBP1-203ENST00000594298 SRFP11831 508 aa19.36■□□□□ 0.69
SHKBP1-203ENST00000594298 PDIA4P13667 645 aaKnown RBP19.36■□□□□ 0.69
SHKBP1-203ENST00000594298 TOB1P50616 345 aaPredicted RBP19.36■□□□□ 0.69
SHKBP1-203ENST00000594298 HSP90AA2PQ14568 343 aaPredicted RBP19.36■□□□□ 0.69
SHKBP1-203ENST00000594298 CATSPER3Q86XQ3 398 aa19.36■□□□□ 0.69
SHKBP1-203ENST00000594298 ZBTB8OSQ8IWT0 167 aa19.36■□□□□ 0.69
SHKBP1-203ENST00000594298 DTWD2Q8NBA8 298 aa19.36■□□□□ 0.69
SHKBP1-203ENST00000594298 NKD2Q969F2 451 aaPredicted RBP19.36■□□□□ 0.69
SHKBP1-203ENST00000594298 SNX27Q96L92 541 aa19.36■□□□□ 0.69
SHKBP1-203ENST00000594298 PIDD1Q9HB75 910 aa19.36■□□□□ 0.69
SHKBP1-203ENST00000594298 DAXXQ9UER7 740 aaPredicted RBP19.36■□□□□ 0.69
SHKBP1-203ENST00000594298 PCDHB6Q9Y5E3 794 aa19.36■□□□□ 0.69
SHKBP1-203ENST00000594298 KRBA1A5PL33 1030 aa19.35■□□□□ 0.69
SHKBP1-203ENST00000594298 ANHXE9PGG2 379 aa19.35■□□□□ 0.69
SHKBP1-203ENST00000594298 ZMYND10O75800 440 aa19.35■□□□□ 0.69
SHKBP1-203ENST00000594298 CFHP08603 1231 aa19.35■□□□□ 0.69
SHKBP1-203ENST00000594298 LAMP2P13473 410 aa19.35■□□□□ 0.69
SHKBP1-203ENST00000594298 PTGDRQ13258 359 aa19.35■□□□□ 0.69
SHKBP1-203ENST00000594298 RTP2Q5QGT7 225 aa19.35■□□□□ 0.69
SHKBP1-203ENST00000594298 MAEAQ7L5Y9 396 aa19.35■□□□□ 0.69
SHKBP1-203ENST00000594298 FRMD5Q7Z6J6 570 aa19.35■□□□□ 0.69
SHKBP1-203ENST00000594298 C4orf32Q8N8J7 132 aa19.35■□□□□ 0.69
SHKBP1-203ENST00000594298 RABGGTAQ92696 567 aa19.35■□□□□ 0.69
SHKBP1-203ENST00000594298 NACC1Q96RE7 527 aa19.35■□□□□ 0.69
SHKBP1-203ENST00000594298 PAAF1Q9BRP4 392 aa19.35■□□□□ 0.69
SHKBP1-203ENST00000594298 POLR3CQ9BUI4 534 aaPredicted RBP19.35■□□□□ 0.69
SHKBP1-203ENST00000594298 C2orf40Q9H1Z8 148 aa19.35■□□□□ 0.69
SHKBP1-203ENST00000594298 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.35■□□□□ 0.69
SHKBP1-203ENST00000594298 MYO15AQ9UKN7 3530 aa19.35■□□□□ 0.69
SHKBP1-203ENST00000594298 PTGESO14684 152 aa19.34■□□□□ 0.69
SHKBP1-203ENST00000594298 N4BP3O15049 544 aa19.34■□□□□ 0.69
SHKBP1-203ENST00000594298 MED24O75448 989 aa19.34■□□□□ 0.69
SHKBP1-203ENST00000594298 RPL17P18621 184 aaKnown RBP19.34■□□□□ 0.69
SHKBP1-203ENST00000594298 SYT1P21579 422 aa19.34■□□□□ 0.69
SHKBP1-203ENST00000594298 PRPHP41219 470 aa19.34■□□□□ 0.69
SHKBP1-203ENST00000594298 FXR2P51116 673 aaKnown RBP eCLIP19.34■□□□□ 0.69
SHKBP1-203ENST00000594298 PDIA5Q14554 519 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms