RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 MYCBPAPQ8TBZ2 947 aa11.35□□□□□ -0.59
SEC22B-201ENST00000578049 NCLNQ969V3 563 aa11.35□□□□□ -0.59
SEC22B-201ENST00000578049 NOD2Q9HC29 1040 aa11.35□□□□□ -0.59
SEC22B-201ENST00000578049 MLXIPLQ9NP71 852 aa11.35□□□□□ -0.59
SEC22B-201ENST00000578049 TTC7AQ9ULT0 858 aaPredicted RBP11.35□□□□□ -0.59
SEC22B-201ENST00000578049 EMSYQ7Z589 1322 aa11.34□□□□□ -0.59
SEC22B-201ENST00000578049 MAGEA13PA6NCF6 341 aa11.34□□□□□ -0.59
SEC22B-201ENST00000578049 USP17L5A8MUK1 530 aa11.34□□□□□ -0.59
SEC22B-201ENST00000578049 PHKA2P46019 1235 aa11.34□□□□□ -0.59
SEC22B-201ENST00000578049 STX3Q13277 289 aa11.34□□□□□ -0.59
SEC22B-201ENST00000578049 PIGOQ8TEQ8 1089 aa11.34□□□□□ -0.59
SEC22B-201ENST00000578049 SETBP1Q9Y6X0 1596 aa11.34□□□□□ -0.59
SEC22B-201ENST00000578049 DENND3A2RUS2 1198 aa11.34□□□□□ -0.59
SEC22B-201ENST00000578049 EIF3DO15371 548 aaKnown RBP eCLIP11.34□□□□□ -0.59
SEC22B-201ENST00000578049 SNX2O60749 519 aa11.34□□□□□ -0.59
SEC22B-201ENST00000578049 TMCC1O94876 653 aa11.34□□□□□ -0.59
SEC22B-201ENST00000578049 DDX5P17844 614 aaKnown RBP11.34□□□□□ -0.59
SEC22B-201ENST00000578049 OSBPP22059 807 aa11.34□□□□□ -0.59
SEC22B-201ENST00000578049 RANBP1P43487 201 aa11.34□□□□□ -0.59
SEC22B-201ENST00000578049 EFNA5P52803 228 aa11.34□□□□□ -0.59
SEC22B-201ENST00000578049 NLRP11P59045 1033 aaKnown RBP11.34□□□□□ -0.59
SEC22B-201ENST00000578049 IGDCC4Q8TDY8 1250 aa11.34□□□□□ -0.59
SEC22B-201ENST00000578049 DDI1Q8WTU0 396 aa11.34□□□□□ -0.59
SEC22B-201ENST00000578049 CHCHD3Q9NX63 227 aaKnown RBP11.34□□□□□ -0.59
SEC22B-201ENST00000578049 TEKT2Q9UIF3 430 aa11.34□□□□□ -0.59
SEC22B-201ENST00000578049 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.34□□□□□ -0.59
SEC22B-201ENST00000578049 MROH7-TTC4A0A0A0MT08 1334 aa11.34□□□□□ -0.59
SEC22B-201ENST00000578049 TMEM120BA0PK00 339 aa11.34□□□□□ -0.59
SEC22B-201ENST00000578049 PHF20L1A8MW92 1017 aa11.34□□□□□ -0.59
SEC22B-201ENST00000578049 RAD51CO43502 376 aa11.34□□□□□ -0.59
SEC22B-201ENST00000578049 LONP2Q86WA8 852 aa11.34□□□□□ -0.59
SEC22B-201ENST00000578049 GHRP10912 638 aa11.34□□□□□ -0.59
SEC22B-201ENST00000578049 ZNF18P17022 549 aa11.34□□□□□ -0.59
SEC22B-201ENST00000578049 FGFR4P22455 802 aa11.34□□□□□ -0.59
SEC22B-201ENST00000578049 P3H1Q32P28 736 aa11.34□□□□□ -0.59
SEC22B-201ENST00000578049 CCNYL1Q8N7R7 359 aa11.34□□□□□ -0.59
SEC22B-201ENST00000578049 HIC2Q96JB3 615 aa11.34□□□□□ -0.59
SEC22B-201ENST00000578049 SEPT3Q9UH03 358 aa11.34□□□□□ -0.59
SEC22B-201ENST00000578049 FCER1AP12319 257 aa11.34□□□□□ -0.59
SEC22B-201ENST00000578049 PIGHQ14442 188 aaPredicted RBP11.34□□□□□ -0.59
SEC22B-201ENST00000578049 KYNUQ16719 465 aa11.34□□□□□ -0.59
SEC22B-201ENST00000578049 ZNF710Q8N1W2 664 aa11.34□□□□□ -0.59
SEC22B-201ENST00000578049 VPS33BQ9H267 617 aa11.34□□□□□ -0.59
SEC22B-201ENST00000578049 SRRM3A6NNA2 597 aaPredicted RBP11.33□□□□□ -0.6
SEC22B-201ENST00000578049 LAMB3Q13751 1172 aa11.33□□□□□ -0.6
SEC22B-201ENST00000578049 EFHC2Q5JST6 749 aa11.33□□□□□ -0.6
SEC22B-201ENST00000578049 SUSD4Q5VX71 490 aa11.33□□□□□ -0.6
SEC22B-201ENST00000578049 HAUS6Q7Z4H7 955 aa11.33□□□□□ -0.6
SEC22B-201ENST00000578049 SLC35G2Q8TBE7 412 aa11.33□□□□□ -0.6
SEC22B-201ENST00000578049 C1orf54Q8WWF1 131 aa11.33□□□□□ -0.6
SEC22B-201ENST00000578049 GDF11O95390 407 aa11.33□□□□□ -0.6
SEC22B-201ENST00000578049 HSPA1AP0DMV8 641 aaKnown RBP11.33□□□□□ -0.6
SEC22B-201ENST00000578049 HSPA1BP0DMV9 641 aaKnown RBP11.33□□□□□ -0.6
SEC22B-201ENST00000578049 GFAPP14136 432 aa11.33□□□□□ -0.6
SEC22B-201ENST00000578049 FMO5P49326 533 aa11.33□□□□□ -0.6
SEC22B-201ENST00000578049 CEP55Q53EZ4 464 aa11.33□□□□□ -0.6
SEC22B-201ENST00000578049 PCYOX1LQ8NBM8 494 aa11.33□□□□□ -0.6
SEC22B-201ENST00000578049 NSUN6Q8TEA1 469 aaKnown RBP11.33□□□□□ -0.6
SEC22B-201ENST00000578049 PAWRQ96IZ0 340 aaKnown RBP11.33□□□□□ -0.6
SEC22B-201ENST00000578049 FSD1LQ9BXM9 530 aa11.33□□□□□ -0.6
SEC22B-201ENST00000578049 C10orf88Q9H8K7 445 aa11.33□□□□□ -0.6
SEC22B-201ENST00000578049 CDY2AQ9Y6F7 541 aa11.33□□□□□ -0.6
SEC22B-201ENST00000578049 CDY1Q9Y6F8 540 aa11.33□□□□□ -0.6
SEC22B-201ENST00000578049 CARSP49589 748 aaKnown RBP11.33□□□□□ -0.6
SEC22B-201ENST00000578049 BCORL1Q5H9F3 1711 aa11.33□□□□□ -0.6
SEC22B-201ENST00000578049 HP1BP3Q5SSJ5 553 aaPredicted RBP11.33□□□□□ -0.6
SEC22B-201ENST00000578049 CAVIN3Q969G5 261 aa11.33□□□□□ -0.6
SEC22B-201ENST00000578049 NSL1Q96IY1 281 aa11.33□□□□□ -0.6
SEC22B-201ENST00000578049 KDM4CQ9H3R0 1056 aa11.33□□□□□ -0.6
SEC22B-201ENST00000578049 SNRPAP09012 282 aaKnown RBP11.33□□□□□ -0.6
SEC22B-201ENST00000578049 EIF2AK2P19525 551 aaKnown RBP11.33□□□□□ -0.6
SEC22B-201ENST00000578049 KCNQ4P56696 695 aa11.33□□□□□ -0.6
SEC22B-201ENST00000578049 NAF1Q96HR8 494 aaKnown RBP11.33□□□□□ -0.6
SEC22B-201ENST00000578049 FUCA2Q9BTY2 467 aa11.33□□□□□ -0.6
SEC22B-201ENST00000578049 VCPKMTQ9H867 229 aa11.33□□□□□ -0.6
SEC22B-201ENST00000578049 HEY1Q9Y5J3 304 aa11.33□□□□□ -0.6
SEC22B-201ENST00000578049 NRKQ7Z2Y5 1582 aa11.33□□□□□ -0.6
SEC22B-201ENST00000578049 ZNF609O15014 1411 aa11.33□□□□□ -0.6
SEC22B-201ENST00000578049 LOC102724159A0A0B4J2E5 919 aa11.33□□□□□ -0.6
SEC22B-201ENST00000578049 PWP2Q15269 919 aaKnown RBP11.33□□□□□ -0.6
SEC22B-201ENST00000578049 LRRC31Q6UY01 552 aa11.33□□□□□ -0.6
SEC22B-201ENST00000578049 RHPN2Q8IUC4 686 aa11.33□□□□□ -0.6
SEC22B-201ENST00000578049 RAB21Q9UL25 225 aa11.33□□□□□ -0.6
SEC22B-201ENST00000578049 NEU2Q9Y3R4 380 aa11.33□□□□□ -0.6
SEC22B-201ENST00000578049 POTEFA5A3E0 1075 aa11.32□□□□□ -0.6
SEC22B-201ENST00000578049 DAB1O75553 588 aa11.32□□□□□ -0.6
SEC22B-201ENST00000578049 POTEIP0CG38 1075 aa11.32□□□□□ -0.6
SEC22B-201ENST00000578049 DUOXA2Q1HG44 320 aa11.32□□□□□ -0.6
SEC22B-201ENST00000578049 TMEM154Q6P9G4 183 aa11.32□□□□□ -0.6
SEC22B-201ENST00000578049 POTEGQ6S5H5 508 aa11.32□□□□□ -0.6
SEC22B-201ENST00000578049 POTEEQ6S8J3 1075 aa11.32□□□□□ -0.6
SEC22B-201ENST00000578049 MSL3Q8N5Y2 521 aaKnown RBP11.32□□□□□ -0.6
SEC22B-201ENST00000578049 APBB2Q92870 758 aa11.32□□□□□ -0.6
SEC22B-201ENST00000578049 ARHGEF26Q96DR7 871 aa11.32□□□□□ -0.6
SEC22B-201ENST00000578049 SENP7Q9BQF6 1050 aa11.32□□□□□ -0.6
SEC22B-201ENST00000578049 OSBPL8Q9BZF1 889 aa11.32□□□□□ -0.6
SEC22B-201ENST00000578049 TRIM45Q9H8W5 580 aaPredicted RBP11.32□□□□□ -0.6
SEC22B-201ENST00000578049 GTF3C4Q9UKN8 822 aa11.32□□□□□ -0.6
SEC22B-201ENST00000578049 CROCC2H7BZ55 1655 aa11.32□□□□□ -0.6
SEC22B-201ENST00000578049 ZNF185O15231 689 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms