RNA–Protein interactions for RNA: ENST00000576582.5

CALCOCO2-228, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-228ENST00000576582 TBX3O15119 743 aa11.9□□□□□ -0.5
CALCOCO2-228ENST00000576582 SPTLC1O15269 473 aa11.9□□□□□ -0.5
CALCOCO2-228ENST00000576582 TSPAN1O60635 241 aa11.9□□□□□ -0.5
CALCOCO2-228ENST00000576582 MYBP10242 640 aa11.9□□□□□ -0.5
CALCOCO2-228ENST00000576582 GLULP15104 373 aa11.9□□□□□ -0.5
CALCOCO2-228ENST00000576582 MAGEA9P43362 315 aa11.9□□□□□ -0.5
CALCOCO2-228ENST00000576582 SCNN1GP51170 649 aa11.9□□□□□ -0.5
CALCOCO2-228ENST00000576582 PTENP60484 403 aa11.9□□□□□ -0.5
CALCOCO2-228ENST00000576582 CCT2P78371 535 aaKnown RBP11.9□□□□□ -0.5
CALCOCO2-228ENST00000576582 PFKPQ01813 784 aa11.9□□□□□ -0.5
CALCOCO2-228ENST00000576582 SSRP1Q08945 709 aaKnown RBP11.9□□□□□ -0.5
CALCOCO2-228ENST00000576582 TOB2Q14106 344 aaPredicted RBP11.9□□□□□ -0.5
CALCOCO2-228ENST00000576582 TFDP1Q14186 410 aa11.9□□□□□ -0.5
CALCOCO2-228ENST00000576582 EMC2Q15006 297 aa11.9□□□□□ -0.5
CALCOCO2-228ENST00000576582 EPHA7Q15375 998 aa11.9□□□□□ -0.5
CALCOCO2-228ENST00000576582 VARS2Q5ST30 1063 aaKnown RBP11.9□□□□□ -0.5
CALCOCO2-228ENST00000576582 FUT10Q6P4F1 479 aa11.9□□□□□ -0.5
CALCOCO2-228ENST00000576582 MTSS1LQ765P7 747 aa11.9□□□□□ -0.5
CALCOCO2-228ENST00000576582 ZSCAN30Q86W11 494 aa11.9□□□□□ -0.5
CALCOCO2-228ENST00000576582 IFNLR1Q8IU57 520 aaPredicted RBP11.9□□□□□ -0.5
CALCOCO2-228ENST00000576582 MAML2Q8IZL2 1156 aaPredicted RBP11.9□□□□□ -0.5
CALCOCO2-228ENST00000576582 DCLK2Q8N568 766 aa11.9□□□□□ -0.5
CALCOCO2-228ENST00000576582 ZNF579Q8NAF0 562 aaKnown RBP11.9□□□□□ -0.5
CALCOCO2-228ENST00000576582 ATRIPQ8WXE1 791 aa11.9□□□□□ -0.5
CALCOCO2-228ENST00000576582 ZNF274Q96GC6 653 aaPredicted RBP11.9□□□□□ -0.5
CALCOCO2-228ENST00000576582 NELL2Q99435 816 aa11.9□□□□□ -0.5
CALCOCO2-228ENST00000576582 DDX23Q9BUQ8 820 aaKnown RBP11.9□□□□□ -0.5
CALCOCO2-228ENST00000576582 EIF2AQ9BY44 585 aaKnown RBP11.9□□□□□ -0.5
CALCOCO2-228ENST00000576582 FOXQ1Q9C009 403 aa11.9□□□□□ -0.5
CALCOCO2-228ENST00000576582 ZSWIM4Q9H7M6 989 aa11.9□□□□□ -0.5
CALCOCO2-228ENST00000576582 ZSWIM6Q9HCJ5 1215 aa11.9□□□□□ -0.5
CALCOCO2-228ENST00000576582 ADAM28Q9UKQ2 775 aa11.9□□□□□ -0.5
CALCOCO2-228ENST00000576582 VAV3Q9UKW4 847 aa11.9□□□□□ -0.5
CALCOCO2-228ENST00000576582 PCDHGA2Q9Y5H1 932 aa11.9□□□□□ -0.5
CALCOCO2-228ENST00000576582 ZMYM2Q9UBW7 1377 aa11.9□□□□□ -0.5
CALCOCO2-228ENST00000576582 SPTBN2O15020 2390 aa11.89□□□□□ -0.51
CALCOCO2-228ENST00000576582 PRR5-ARHGAP8B1AHC4 643 aa11.89□□□□□ -0.51
CALCOCO2-228ENST00000576582 LAMTOR5O43504 91 aa11.89□□□□□ -0.51
CALCOCO2-228ENST00000576582 SLC37A4O43826 429 aa11.89□□□□□ -0.51
CALCOCO2-228ENST00000576582 TADA2AO75478 443 aa11.89□□□□□ -0.51
CALCOCO2-228ENST00000576582 SEC24BO95487 1268 aa11.89□□□□□ -0.51
CALCOCO2-228ENST00000576582 GCFC2P16383 781 aaKnown RBP11.89□□□□□ -0.51
CALCOCO2-228ENST00000576582 HOXA9P31269 272 aa11.89□□□□□ -0.51
CALCOCO2-228ENST00000576582 YWHABP31946 246 aaKnown RBP11.89□□□□□ -0.51
CALCOCO2-228ENST00000576582 RBM25P49756 843 aaKnown RBP11.89□□□□□ -0.51
CALCOCO2-228ENST00000576582 ARHGAP8P85298 464 aa11.89□□□□□ -0.51
CALCOCO2-228ENST00000576582 RSPO4Q2I0M5 234 aaPredicted RBP11.89□□□□□ -0.51
CALCOCO2-228ENST00000576582 SLC44A4Q53GD3 710 aa11.89□□□□□ -0.51
CALCOCO2-228ENST00000576582 PPP4R3AQ6IN85 833 aa11.89□□□□□ -0.51
CALCOCO2-228ENST00000576582 POTEGQ6S5H5 508 aa11.89□□□□□ -0.51
CALCOCO2-228ENST00000576582 RUFY3Q7L099 469 aa11.89□□□□□ -0.51
CALCOCO2-228ENST00000576582 KRT25Q7Z3Z0 450 aa11.89□□□□□ -0.51
CALCOCO2-228ENST00000576582 GSTCDQ8NEC7 633 aa11.89□□□□□ -0.51
CALCOCO2-228ENST00000576582 SECISBP2LQ93073 1101 aaKnown RBP11.89□□□□□ -0.51
CALCOCO2-228ENST00000576582 ZFP42Q96MM3 310 aa11.89□□□□□ -0.51
CALCOCO2-228ENST00000576582 MTRQ99707 1265 aa11.89□□□□□ -0.51
CALCOCO2-228ENST00000576582 NAP1L4Q99733 375 aaKnown RBP11.89□□□□□ -0.51
CALCOCO2-228ENST00000576582 PANK2Q9BZ23 570 aa11.89□□□□□ -0.51
CALCOCO2-228ENST00000576582 TRIM6Q9C030 488 aaPredicted RBP11.89□□□□□ -0.51
CALCOCO2-228ENST00000576582 SPATA6Q9NWH7 488 aaPredicted RBP11.89□□□□□ -0.51
CALCOCO2-228ENST00000576582 NCDNQ9UBB6 729 aa11.89□□□□□ -0.51
CALCOCO2-228ENST00000576582 HES2Q9Y543 173 aa11.89□□□□□ -0.51
CALCOCO2-228ENST00000576582 SF3B1O75533 1304 aaKnown RBP eCLIP11.88□□□□□ -0.513e-6■■■□□ 16.8
CALCOCO2-228ENST00000576582 MTCL1Q9Y4B5 1905 aaKnown RBP11.88□□□□□ -0.51
CALCOCO2-228ENST00000576582 FANCMQ8IYD8 2048 aa11.88□□□□□ -0.51
CALCOCO2-228ENST00000576582 POTEMA6NI47 508 aa11.88□□□□□ -0.51
CALCOCO2-228ENST00000576582 FAM170BA6NMN3 283 aa11.88□□□□□ -0.51
CALCOCO2-228ENST00000576582 F8W810 466 aa11.88□□□□□ -0.51
CALCOCO2-228ENST00000576582 INO80B-WBP1J3KQ70 363 aa11.88□□□□□ -0.51
CALCOCO2-228ENST00000576582 NCAM2O15394 837 aa11.88□□□□□ -0.51
CALCOCO2-228ENST00000576582 XYLBO75191 536 aa11.88□□□□□ -0.51
CALCOCO2-228ENST00000576582 REC8O95072 547 aa11.88□□□□□ -0.51
CALCOCO2-228ENST00000576582 POU2F2P09086 479 aa11.88□□□□□ -0.51
CALCOCO2-228ENST00000576582 GRIK3Q13003 919 aa11.88□□□□□ -0.51
CALCOCO2-228ENST00000576582 SNW1Q13573 536 aaKnown RBP11.88□□□□□ -0.51
CALCOCO2-228ENST00000576582 MLF2Q15773 248 aaPredicted RBP11.88□□□□□ -0.51
CALCOCO2-228ENST00000576582 INF2Q27J81 1249 aa11.88□□□□□ -0.51
CALCOCO2-228ENST00000576582 UVSSAQ2YD98 709 aa11.88□□□□□ -0.51
CALCOCO2-228ENST00000576582 XKR9Q5GH70 373 aa11.88□□□□□ -0.51
CALCOCO2-228ENST00000576582 LIN9Q5TKA1 542 aa11.88□□□□□ -0.51
CALCOCO2-228ENST00000576582 PDXDC1Q6P996 788 aa11.88□□□□□ -0.51
CALCOCO2-228ENST00000576582 PARM1Q6UWI2 310 aa11.88□□□□□ -0.51
CALCOCO2-228ENST00000576582 RTL10Q7L3V2 364 aa11.88□□□□□ -0.51
CALCOCO2-228ENST00000576582 GRASPQ7Z6J2 395 aaPredicted RBP11.88□□□□□ -0.51
CALCOCO2-228ENST00000576582 ANP32BQ92688 251 aaKnown RBP11.88□□□□□ -0.51
CALCOCO2-228ENST00000576582 FGF14Q92915 247 aa11.88□□□□□ -0.51
CALCOCO2-228ENST00000576582 B3GALT6Q96L58 329 aa11.88□□□□□ -0.51
CALCOCO2-228ENST00000576582 LXNQ9BS40 222 aa11.88□□□□□ -0.51
CALCOCO2-228ENST00000576582 RPP25Q9BUL9 199 aaKnown RBP11.88□□□□□ -0.51
CALCOCO2-228ENST00000576582 NFKBIZQ9BYH8 718 aa11.88□□□□□ -0.51
CALCOCO2-228ENST00000576582 TM6SF1Q9BZW5 370 aa11.88□□□□□ -0.51
CALCOCO2-228ENST00000576582 WRAP73Q9P2S5 460 aaPredicted RBP11.88□□□□□ -0.51
CALCOCO2-228ENST00000576582 FBXW11Q9UKB1 542 aa11.88□□□□□ -0.51
CALCOCO2-228ENST00000576582 A0A1B0GUA9 196 aa11.87□□□□□ -0.51
CALCOCO2-228ENST00000576582 CPLX1O14810 134 aa11.87□□□□□ -0.51
CALCOCO2-228ENST00000576582 MARCH6O60337 910 aa11.87□□□□□ -0.51
CALCOCO2-228ENST00000576582 ARF4P18085 180 aaPredicted RBP11.87□□□□□ -0.51
CALCOCO2-228ENST00000576582 RPL17P18621 184 aaKnown RBP11.87□□□□□ -0.51
CALCOCO2-228ENST00000576582 CSTF1Q05048 431 aaKnown RBP11.87□□□□□ -0.51
CALCOCO2-228ENST00000576582 MBTD1Q05BQ5 628 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms