RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 AXIN1O15169 862 aa6.58□□□□□ -1.36
SMG6-219ENST00000575663 GAS7O60861 476 aa6.58□□□□□ -1.36
SMG6-219ENST00000575663 MAFO75444 373 aaPredicted RBP6.58□□□□□ -1.36
SMG6-219ENST00000575663 CCDC192P0DO97 292 aa6.58□□□□□ -1.36
SMG6-219ENST00000575663 AXLP30530 894 aa6.58□□□□□ -1.36
SMG6-219ENST00000575663 MCM5P33992 734 aa6.58□□□□□ -1.36
SMG6-219ENST00000575663 MPLP40238 635 aa6.58□□□□□ -1.36
SMG6-219ENST00000575663 ELAVL2Q12926 359 aaKnown RBP6.58□□□□□ -1.36
SMG6-219ENST00000575663 GRIK3Q13003 919 aa6.58□□□□□ -1.36
SMG6-219ENST00000575663 PTGDRQ13258 359 aa6.58□□□□□ -1.36
SMG6-219ENST00000575663 HDAC1Q13547 482 aaPredicted RBP6.58□□□□□ -1.36
SMG6-219ENST00000575663 HSP90AA2PQ14568 343 aaPredicted RBP6.58□□□□□ -1.36
SMG6-219ENST00000575663 PCBP1Q15365 356 aaKnown RBP eCLIP6.58□□□□□ -1.36
SMG6-219ENST00000575663 TARBP2Q15633 366 aaKnown RBP6.58□□□□□ -1.36
SMG6-219ENST00000575663 CCDC6Q16204 474 aa6.58□□□□□ -1.36
SMG6-219ENST00000575663 UGCGQ16739 394 aa6.58□□□□□ -1.36
SMG6-219ENST00000575663 RTP2Q5QGT7 225 aa6.58□□□□□ -1.36
SMG6-219ENST00000575663 UBXN11Q5T124 520 aa6.58□□□□□ -1.36
SMG6-219ENST00000575663 JAKMIP3Q5VZ66 844 aa6.58□□□□□ -1.36
SMG6-219ENST00000575663 TYW1BQ6NUM6 668 aa6.58□□□□□ -1.36
SMG6-219ENST00000575663 PRSS55Q6UWB4 352 aaPredicted RBP6.58□□□□□ -1.36
SMG6-219ENST00000575663 MIER3Q7Z3K6 550 aa6.58□□□□□ -1.36
SMG6-219ENST00000575663 CACNA2D4Q7Z3S7 1137 aa6.58□□□□□ -1.36
SMG6-219ENST00000575663 CEP57Q86XR8 500 aa6.58□□□□□ -1.36
SMG6-219ENST00000575663 EXOC8Q8IYI6 725 aa6.58□□□□□ -1.36
SMG6-219ENST00000575663 ZNF687Q8N1G0 1237 aa6.58□□□□□ -1.36
SMG6-219ENST00000575663 REXO1Q8N1G1 1221 aaKnown RBP6.58□□□□□ -1.36
SMG6-219ENST00000575663 FANCBQ8NB91 859 aa6.58□□□□□ -1.36
SMG6-219ENST00000575663 SMG8Q8ND04 991 aaKnown RBP6.58□□□□□ -1.36
SMG6-219ENST00000575663 RDM1Q8NG50 284 aa6.58□□□□□ -1.36
SMG6-219ENST00000575663 FAM200AQ8TCP9 573 aa6.58□□□□□ -1.36
SMG6-219ENST00000575663 CCDC12Q8WUD4 166 aaPredicted RBP6.58□□□□□ -1.36
SMG6-219ENST00000575663 DEPDC1BQ8WUY9 529 aa6.58□□□□□ -1.36
SMG6-219ENST00000575663 PSPC1Q8WXF1 523 aaKnown RBP6.58□□□□□ -1.36
SMG6-219ENST00000575663 GATA6Q92908 595 aa6.58□□□□□ -1.36
SMG6-219ENST00000575663 MCRS1Q96EZ8 462 aa6.58□□□□□ -1.36
SMG6-219ENST00000575663 RIT2Q99578 217 aa6.58□□□□□ -1.36
SMG6-219ENST00000575663 TTPALQ9BTX7 342 aa6.58□□□□□ -1.36
SMG6-219ENST00000575663 EDEM2Q9BV94 578 aa6.58□□□□□ -1.36
SMG6-219ENST00000575663 APOL6Q9BWW8 343 aa6.58□□□□□ -1.36
SMG6-219ENST00000575663 TMEM121BQ9BXQ6 578 aaPredicted RBP6.58□□□□□ -1.36
SMG6-219ENST00000575663 NIFKQ9BYG3 293 aaKnown RBP6.58□□□□□ -1.36
SMG6-219ENST00000575663 IFT122Q9HBG6 1241 aa6.58□□□□□ -1.36
SMG6-219ENST00000575663 VPS45Q9NRW7 570 aa6.58□□□□□ -1.36
SMG6-219ENST00000575663 RXFP3Q9NSD7 469 aa6.58□□□□□ -1.36
SMG6-219ENST00000575663 HCFC1R1Q9NWW0 138 aa6.58□□□□□ -1.36
SMG6-219ENST00000575663 BARHL2Q9NY43 387 aa6.58□□□□□ -1.36
SMG6-219ENST00000575663 DNMT3BQ9UBC3 853 aaKnown RBP6.58□□□□□ -1.36
SMG6-219ENST00000575663 GIT1Q9Y2X7 761 aa6.58□□□□□ -1.36
SMG6-219ENST00000575663 ZMYM2Q9UBW7 1377 aa6.57□□□□□ -1.36
SMG6-219ENST00000575663 SMG1Q96Q15 3661 aaKnown RBP6.57□□□□□ -1.36
SMG6-219ENST00000575663 SHISA7A6NL88 538 aa6.57□□□□□ -1.36
SMG6-219ENST00000575663 EIF4E1BA6NMX2 242 aaKnown RBP6.57□□□□□ -1.36
SMG6-219ENST00000575663 ZNF197O14709 1029 aa6.57□□□□□ -1.36
SMG6-219ENST00000575663 ZNF263O14978 683 aa6.57□□□□□ -1.36
SMG6-219ENST00000575663 RPP40O75818 363 aaKnown RBP6.57□□□□□ -1.36
SMG6-219ENST00000575663 LRG1P02750 347 aa6.57□□□□□ -1.36
SMG6-219ENST00000575663 RHOP08100 348 aa6.57□□□□□ -1.36
SMG6-219ENST00000575663 CHRNB1P11230 501 aa6.57□□□□□ -1.36
SMG6-219ENST00000575663 CEBPBP17676 345 aa6.57□□□□□ -1.36
SMG6-219ENST00000575663 PSMC3P17980 439 aa6.57□□□□□ -1.36
SMG6-219ENST00000575663 SPINK2P20155 84 aa6.57□□□□□ -1.36
SMG6-219ENST00000575663 CCNE1P24864 410 aa6.57□□□□□ -1.36
SMG6-219ENST00000575663 GDI1P31150 447 aa6.57□□□□□ -1.36
SMG6-219ENST00000575663 HOXA6P31267 233 aa6.57□□□□□ -1.36
SMG6-219ENST00000575663 LIFRP42702 1097 aa6.57□□□□□ -1.36
SMG6-219ENST00000575663 PDE4CQ08493 712 aa6.57□□□□□ -1.36
SMG6-219ENST00000575663 DGKKQ5KSL6 1271 aa6.57□□□□□ -1.36
SMG6-219ENST00000575663 AXDND1Q5T1B0 1012 aaPredicted RBP6.57□□□□□ -1.36
SMG6-219ENST00000575663 FAM171A1Q5VUB5 890 aa6.57□□□□□ -1.36
SMG6-219ENST00000575663 LRCH2Q5VUJ6 765 aa6.57□□□□□ -1.36
SMG6-219ENST00000575663 ERICH6BQ5W0A0 696 aa6.57□□□□□ -1.36
SMG6-219ENST00000575663 TANGO2Q6ICL3 276 aa6.57□□□□□ -1.36
SMG6-219ENST00000575663 PDZD4Q76G19 769 aaPredicted RBP6.57□□□□□ -1.36
SMG6-219ENST00000575663 CHD1LQ86WJ1 897 aa6.57□□□□□ -1.36
SMG6-219ENST00000575663 RAB11FIP4Q86YS3 637 aa6.57□□□□□ -1.36
SMG6-219ENST00000575663 KSR1Q8IVT5 923 aa6.57□□□□□ -1.36
SMG6-219ENST00000575663 PLEKHM2Q8IWE5 1019 aa6.57□□□□□ -1.36
SMG6-219ENST00000575663 YAF2Q8IY57 180 aa6.57□□□□□ -1.36
SMG6-219ENST00000575663 CSGALNACT1Q8TDX6 532 aa6.57□□□□□ -1.36
SMG6-219ENST00000575663 HASPINQ8TF76 798 aa6.57□□□□□ -1.36
SMG6-219ENST00000575663 GAB3Q8WWW8 586 aa6.57□□□□□ -1.36
SMG6-219ENST00000575663 CRYGNQ8WXF5 182 aa6.57□□□□□ -1.36
SMG6-219ENST00000575663 ZFP42Q96MM3 310 aa6.57□□□□□ -1.36
SMG6-219ENST00000575663 CLSTN3Q9BQT9 956 aa6.57□□□□□ -1.36
SMG6-219ENST00000575663 SCNM1Q9BWG6 230 aa6.57□□□□□ -1.36
SMG6-219ENST00000575663 PLA2G2FQ9BZM2 168 aa6.57□□□□□ -1.36
SMG6-219ENST00000575663 IL25Q9H293 177 aa6.57□□□□□ -1.36
SMG6-219ENST00000575663 ZNF334Q9HCZ1 680 aaPredicted RBP6.57□□□□□ -1.36
SMG6-219ENST00000575663 AVENQ9NQS1 362 aaPredicted RBP6.57□□□□□ -1.36
SMG6-219ENST00000575663 ANKFY1Q9P2R3 1169 aa6.57□□□□□ -1.36
SMG6-219ENST00000575663 PPME1Q9Y570 386 aa6.57□□□□□ -1.36
SMG6-219ENST00000575663 FRYQ5TBA9 3013 aa6.57□□□□□ -1.36
SMG6-219ENST00000575663 MYH15Q9Y2K3 1946 aa6.56□□□□□ -1.36
SMG6-219ENST00000575663 DOCK8Q8NF50 2099 aa6.56□□□□□ -1.36
SMG6-219ENST00000575663 CCDC163A0A0D9SF12 145 aa6.56□□□□□ -1.36
SMG6-219ENST00000575663 DDX11L8A8MPP1 907 aa6.56□□□□□ -1.36
SMG6-219ENST00000575663 MSH4O15457 936 aa6.56□□□□□ -1.36
SMG6-219ENST00000575663 DKC1O60832 514 aaKnown RBP eCLIP6.56□□□□□ -1.36
SMG6-219ENST00000575663 AKAP3O75969 853 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms