RNA–Protein interactions for RNA: ENST00000568605.5

CLK3-224, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-224ENST00000568605 SNTG2Q9NY99 539 aa14.22□□□□□ -0.13
CLK3-224ENST00000568605 GDAQ9Y2T3 454 aa14.22□□□□□ -0.13
CLK3-224ENST00000568605 COL6A3P12111 3177 aa14.22□□□□□ -0.13
CLK3-224ENST00000568605 TSC2P49815 1807 aa14.21□□□□□ -0.13
CLK3-224ENST00000568605 A0A1B0GVL5 298 aa14.21□□□□□ -0.13
CLK3-224ENST00000568605 PIGRP01833 764 aa14.21□□□□□ -0.13
CLK3-224ENST00000568605 MYL1P05976 194 aa14.21□□□□□ -0.13
CLK3-224ENST00000568605 NMT1P30419 496 aaKnown RBP14.21□□□□□ -0.13
CLK3-224ENST00000568605 SYKP43405 635 aa14.21□□□□□ -0.13
CLK3-224ENST00000568605 COASYQ13057 564 aa14.21□□□□□ -0.13
CLK3-224ENST00000568605 CNNM4Q6P4Q7 775 aa14.21□□□□□ -0.13
CLK3-224ENST00000568605 ZBTB33Q86T24 672 aa14.21□□□□□ -0.13
CLK3-224ENST00000568605 FSIP1Q8NA03 581 aa14.21□□□□□ -0.13
CLK3-224ENST00000568605 SPPL3Q8TCT6 385 aa14.21□□□□□ -0.13
CLK3-224ENST00000568605 STAMQ92783 540 aa14.21□□□□□ -0.13
CLK3-224ENST00000568605 ACAP3Q96P50 834 aa14.21□□□□□ -0.13
CLK3-224ENST00000568605 PTPRHQ9HD43 1115 aa14.21□□□□□ -0.13
CLK3-224ENST00000568605 ENTPD7Q9NQZ7 604 aa14.21□□□□□ -0.13
CLK3-224ENST00000568605 KLK14Q9P0G3 267 aa14.21□□□□□ -0.13
CLK3-224ENST00000568605 THEGQ9P2T0 379 aa14.21□□□□□ -0.13
CLK3-224ENST00000568605 USP20Q9Y2K6 914 aa14.21□□□□□ -0.13
CLK3-224ENST00000568605 PCDHB13Q9Y5F0 798 aa14.21□□□□□ -0.13
CLK3-224ENST00000568605 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.21□□□□□ -0.13
CLK3-224ENST00000568605 UBE4BO95155 1302 aa14.2□□□□□ -0.14
CLK3-224ENST00000568605 TCF20Q9UGU0 1960 aaKnown RBP14.2□□□□□ -0.14
CLK3-224ENST00000568605 NCK2O43639 380 aa14.2□□□□□ -0.14
CLK3-224ENST00000568605 CSPG5O95196 566 aa14.2□□□□□ -0.14
CLK3-224ENST00000568605 ALDH2P05091 517 aa14.2□□□□□ -0.14
CLK3-224ENST00000568605 THP07101 528 aa14.2□□□□□ -0.14
CLK3-224ENST00000568605 GALTP07902 379 aa14.2□□□□□ -0.14
CLK3-224ENST00000568605 SLFN14P0C7P3 912 aa14.2□□□□□ -0.14
CLK3-224ENST00000568605 PBX3P40426 434 aa14.2□□□□□ -0.14
CLK3-224ENST00000568605 MCL1Q07820 350 aa14.2□□□□□ -0.14
CLK3-224ENST00000568605 DSC1Q08554 894 aa14.2□□□□□ -0.14
CLK3-224ENST00000568605 TUSC3Q13454 348 aa14.2□□□□□ -0.14
CLK3-224ENST00000568605 SLFN12LQ6IEE8 588 aa14.2□□□□□ -0.14
CLK3-224ENST00000568605 ZNF720Q7Z2F6 126 aa14.2□□□□□ -0.14
CLK3-224ENST00000568605 CCDC47Q96A33 483 aaKnown RBP14.2□□□□□ -0.14
CLK3-224ENST00000568605 IGSF21Q96ID5 467 aa14.2□□□□□ -0.14
CLK3-224ENST00000568605 FIZ1Q96SL8 496 aa14.2□□□□□ -0.14
CLK3-224ENST00000568605 C7orf25Q9BPX7 421 aa14.2□□□□□ -0.14
CLK3-224ENST00000568605 GDPD2Q9HCC8 539 aa14.2□□□□□ -0.14
CLK3-224ENST00000568605 SLC38A7Q9NVC3 462 aa14.2□□□□□ -0.14
CLK3-224ENST00000568605 DNAJB4Q9UDY4 337 aa14.2□□□□□ -0.14
CLK3-224ENST00000568605 COG5Q9UP83 839 aa14.2□□□□□ -0.14
CLK3-224ENST00000568605 FAN1Q9Y2M0 1017 aa14.2□□□□□ -0.14
CLK3-224ENST00000568605 EYSQ5T1H1 3165 aa14.19□□□□□ -0.14
CLK3-224ENST00000568605 FAM237AA0A1B0GTK4 181 aa14.19□□□□□ -0.14
CLK3-224ENST00000568605 PPP1R37O75864 691 aa14.19□□□□□ -0.14
CLK3-224ENST00000568605 DDHD2O94830 711 aa14.19□□□□□ -0.14
CLK3-224ENST00000568605 AFMP43652 599 aa14.19□□□□□ -0.14
CLK3-224ENST00000568605 OR1G1P47890 313 aa14.19□□□□□ -0.14
CLK3-224ENST00000568605 SLC11A1P49279 550 aa14.19□□□□□ -0.14
CLK3-224ENST00000568605 OSTNP61366 133 aa14.19□□□□□ -0.14
CLK3-224ENST00000568605 SMC1AQ14683 1233 aaKnown RBP14.19□□□□□ -0.14
CLK3-224ENST00000568605 AAK1Q2M2I8 961 aa14.19□□□□□ -0.14
CLK3-224ENST00000568605 FAM26FQ5R3K3 315 aa14.19□□□□□ -0.14
CLK3-224ENST00000568605 L1TD1Q5T7N2 865 aaKnown RBP14.19□□□□□ -0.14
CLK3-224ENST00000568605 UNC13DQ70J99 1090 aa14.19□□□□□ -0.14
CLK3-224ENST00000568605 ZNF280BQ86YH2 543 aa14.19□□□□□ -0.14
CLK3-224ENST00000568605 COLGALT2Q8IYK4 626 aa14.19□□□□□ -0.14
CLK3-224ENST00000568605 SYCP3Q8IZU3 236 aa14.19□□□□□ -0.14
CLK3-224ENST00000568605 CEP120Q8N960 986 aa14.19□□□□□ -0.14
CLK3-224ENST00000568605 MICAL1Q8TDZ2 1067 aa14.19□□□□□ -0.14
CLK3-224ENST00000568605 CHAMP1Q96JM3 812 aa14.19□□□□□ -0.14
CLK3-224ENST00000568605 ACCSQ96QU6 501 aa14.19□□□□□ -0.14
CLK3-224ENST00000568605 TCF25Q9BQ70 676 aa14.19□□□□□ -0.14
CLK3-224ENST00000568605 MSTO1Q9BUK6 570 aa14.19□□□□□ -0.14
CLK3-224ENST00000568605 COLEC11Q9BWP8 271 aa14.19□□□□□ -0.14
CLK3-224ENST00000568605 TMEM206Q9H813 350 aa14.19□□□□□ -0.14
CLK3-224ENST00000568605 NGRNQ9NPE2 291 aaKnown RBP14.19□□□□□ -0.14
CLK3-224ENST00000568605 CHMP5Q9NZZ3 219 aa14.19□□□□□ -0.14
CLK3-224ENST00000568605 TBC1D7Q9P0N9 293 aa14.19□□□□□ -0.14
CLK3-224ENST00000568605 SERTAD1Q9UHV2 236 aa14.19□□□□□ -0.14
CLK3-224ENST00000568605 HPSEQ9Y251 543 aa14.19□□□□□ -0.14
CLK3-224ENST00000568605 PRG3Q9Y2Y8 225 aaPredicted RBP14.19□□□□□ -0.14
CLK3-224ENST00000568605 REV3LO60673 3130 aa14.19□□□□□ -0.14
CLK3-224ENST00000568605 PVALEFA0A1B0GWK0 134 aa14.18□□□□□ -0.14
CLK3-224ENST00000568605 NT5C1B-RDH14C9J2C7 533 aa14.18□□□□□ -0.14
CLK3-224ENST00000568605 ABLIM1O14639 778 aa14.18□□□□□ -0.14
CLK3-224ENST00000568605 NRP1O14786 923 aa14.18□□□□□ -0.14
CLK3-224ENST00000568605 OGTO15294 1046 aa14.18□□□□□ -0.14
CLK3-224ENST00000568605 EIF3DO15371 548 aaKnown RBP eCLIP14.18□□□□□ -0.14
CLK3-224ENST00000568605 ACTN4O43707 911 aaKnown RBP14.18□□□□□ -0.14
CLK3-224ENST00000568605 SRGAP2BP0DMP2 458 aa14.18□□□□□ -0.14
CLK3-224ENST00000568605 CA8P35219 290 aa14.18□□□□□ -0.14
CLK3-224ENST00000568605 AFF1P51825 1210 aaKnown RBP14.18□□□□□ -0.14
CLK3-224ENST00000568605 PPP2R3AQ06190 1150 aa14.18□□□□□ -0.14
CLK3-224ENST00000568605 POSTNQ15063 836 aa14.18□□□□□ -0.14
CLK3-224ENST00000568605 ZC2HC1CQ53FD0 456 aaPredicted RBP14.18□□□□□ -0.14
CLK3-224ENST00000568605 TCEAL5Q5H9L2 206 aa14.18□□□□□ -0.14
CLK3-224ENST00000568605 TMC7Q7Z402 723 aa14.18□□□□□ -0.14
CLK3-224ENST00000568605 DDX53Q86TM3 631 aaKnown RBP14.18□□□□□ -0.14
CLK3-224ENST00000568605 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.18□□□□□ -0.14
CLK3-224ENST00000568605 TMEM87AQ8NBN3 555 aa14.18□□□□□ -0.14
CLK3-224ENST00000568605 GSTCDQ8NEC7 633 aa14.18□□□□□ -0.14
CLK3-224ENST00000568605 SNX27Q96L92 541 aa14.18□□□□□ -0.14
CLK3-224ENST00000568605 UROC1Q96N76 676 aa14.18□□□□□ -0.14
CLK3-224ENST00000568605 C2orf16Q68DN1 1984 aa14.18□□□□□ -0.14
CLK3-224ENST00000568605 SCN1AP35498 2009 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms