RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 SYT10Q6XYQ8 523 aa14.92□□□□□ -0.02
TPM1-215ENST00000558868 APBB1IPQ7Z5R6 666 aaPredicted RBP14.92□□□□□ -0.02
TPM1-215ENST00000558868 BRSK2Q8IWQ3 736 aa14.92□□□□□ -0.02
TPM1-215ENST00000558868 JAKMIP2Q96AA8 810 aa14.92□□□□□ -0.02
TPM1-215ENST00000558868 ZBTB45Q96K62 511 aaPredicted RBP14.92□□□□□ -0.02
TPM1-215ENST00000558868 SCLT1Q96NL6 688 aa14.92□□□□□ -0.02
TPM1-215ENST00000558868 NT5C1BQ96P26 610 aa14.92□□□□□ -0.02
TPM1-215ENST00000558868 LZTFL1Q9NQ48 299 aa14.92□□□□□ -0.02
TPM1-215ENST00000558868 SETD4Q9NVD3 440 aa14.92□□□□□ -0.02
TPM1-215ENST00000558868 ZSWIM8A7E2V4 1837 aa14.92□□□□□ -0.02
TPM1-215ENST00000558868 A0A087WZ62 844 aa14.91□□□□□ -0.02
TPM1-215ENST00000558868 F8VZ95 297 aa14.91□□□□□ -0.02
TPM1-215ENST00000558868 RBAK-RBAKDNI3L0D1 243 aa14.91□□□□□ -0.02
TPM1-215ENST00000558868 TULP1O00294 542 aaPredicted RBP14.91□□□□□ -0.02
TPM1-215ENST00000558868 GNRH1P01148 92 aa14.91□□□□□ -0.02
TPM1-215ENST00000558868 PROZP22891 400 aa14.91□□□□□ -0.02
TPM1-215ENST00000558868 CASQ1P31415 396 aa14.91□□□□□ -0.02
TPM1-215ENST00000558868 ACOT2P49753 483 aa14.91□□□□□ -0.02
TPM1-215ENST00000558868 MFAP3P55082 362 aa14.91□□□□□ -0.02
TPM1-215ENST00000558868 GJA9P57773 515 aa14.91□□□□□ -0.02
TPM1-215ENST00000558868 NCBP1Q09161 790 aaKnown RBP14.91□□□□□ -0.02
TPM1-215ENST00000558868 KIF5AQ12840 1032 aa14.91□□□□□ -0.02
TPM1-215ENST00000558868 DRAP1Q14919 205 aaPredicted RBP14.91□□□□□ -0.02
TPM1-215ENST00000558868 ARHGEF6Q15052 776 aa14.91□□□□□ -0.02
TPM1-215ENST00000558868 ASTE1Q2TB18 679 aaPredicted RBP14.91□□□□□ -0.02
TPM1-215ENST00000558868 WDR44Q5JSH3 913 aa14.91□□□□□ -0.02
TPM1-215ENST00000558868 MARCH8Q5T0T0 291 aa14.91□□□□□ -0.02
TPM1-215ENST00000558868 CRELD2Q6UXH1 353 aaPredicted RBP14.91□□□□□ -0.02
TPM1-215ENST00000558868 SV2AQ7L0J3 742 aa14.91□□□□□ -0.02
TPM1-215ENST00000558868 ENOSF1Q7L5Y1 443 aa14.91□□□□□ -0.02
TPM1-215ENST00000558868 IRF2BP2Q7Z5L9 587 aa14.91□□□□□ -0.02
TPM1-215ENST00000558868 KIAA0319LQ8IZA0 1049 aa14.91□□□□□ -0.02
TPM1-215ENST00000558868 LMBR1Q8WVP7 490 aa14.91□□□□□ -0.02
TPM1-215ENST00000558868 NLRP7Q8WX94 980 aa14.91□□□□□ -0.02
TPM1-215ENST00000558868 KAT2BQ92831 832 aa14.91□□□□□ -0.02
TPM1-215ENST00000558868 CGRRF1Q99675 332 aa14.91□□□□□ -0.02
TPM1-215ENST00000558868 FDXACB1Q9BRP7 624 aaPredicted RBP14.91□□□□□ -0.02
TPM1-215ENST00000558868 IFIH1Q9BYX4 1025 aaKnown RBP14.91□□□□□ -0.02
TPM1-215ENST00000558868 ARHGAP39Q9C0H5 1083 aa14.91□□□□□ -0.02
TPM1-215ENST00000558868 HAPLN2Q9GZV7 340 aa14.91□□□□□ -0.02
TPM1-215ENST00000558868 UPF3AQ9H1J1 476 aaKnown RBP14.91□□□□□ -0.02
TPM1-215ENST00000558868 IFT122Q9HBG6 1241 aa14.91□□□□□ -0.02
TPM1-215ENST00000558868 UBE2TQ9NPD8 197 aaPredicted RBP14.91□□□□□ -0.02
TPM1-215ENST00000558868 RAB20Q9NX57 234 aa14.91□□□□□ -0.02
TPM1-215ENST00000558868 DNAI1Q9UI46 699 aa14.91□□□□□ -0.02
TPM1-215ENST00000558868 GABRQQ9UN88 632 aa14.91□□□□□ -0.02
TPM1-215ENST00000558868 REXO2Q9Y3B8 237 aaKnown RBP14.91□□□□□ -0.02
TPM1-215ENST00000558868 PCDHA13Q9Y5I0 950 aa14.91□□□□□ -0.02
TPM1-215ENST00000558868 KAT6AQ92794 2004 aa14.91□□□□□ -0.02
TPM1-215ENST00000558868 CNTNAP2Q9UHC6 1331 aa14.91□□□□□ -0.02
TPM1-215ENST00000558868 MBLAC1A4D2B0 266 aaPredicted RBP14.9□□□□□ -0.02
TPM1-215ENST00000558868 DLL1O00548 723 aa14.9□□□□□ -0.02
TPM1-215ENST00000558868 SEPT4O43236 478 aa14.9□□□□□ -0.02
TPM1-215ENST00000558868 TBC1D8O95759 1140 aa14.9□□□□□ -0.02
TPM1-215ENST00000558868 EDN1P05305 212 aa14.9□□□□□ -0.02
TPM1-215ENST00000558868 GJB1P08034 283 aa14.9□□□□□ -0.02
TPM1-215ENST00000558868 PLEKP08567 350 aaPredicted RBP14.9□□□□□ -0.02
TPM1-215ENST00000558868 RARBP10826 455 aa14.9□□□□□ -0.02
TPM1-215ENST00000558868 MCF2P10911 925 aa14.9□□□□□ -0.02
TPM1-215ENST00000558868 HARSP12081 509 aaKnown RBP14.9□□□□□ -0.02
TPM1-215ENST00000558868 MAGEA1P43355 309 aa14.9□□□□□ -0.02
TPM1-215ENST00000558868 VEGFBP49765 207 aa14.9□□□□□ -0.02
TPM1-215ENST00000558868 NKX3-2P78367 333 aa14.9□□□□□ -0.02
TPM1-215ENST00000558868 ARID5AQ03989 594 aa14.9□□□□□ -0.02
TPM1-215ENST00000558868 PRKCZQ05513 592 aa14.9□□□□□ -0.02
TPM1-215ENST00000558868 SLC18A3Q16572 532 aa14.9□□□□□ -0.02
TPM1-215ENST00000558868 ZNF568Q3ZCX4 644 aa14.9□□□□□ -0.02
TPM1-215ENST00000558868 CCDC122Q5T0U0 273 aa14.9□□□□□ -0.02
TPM1-215ENST00000558868 SMYD5Q6GMV2 418 aa14.9□□□□□ -0.02
TPM1-215ENST00000558868 PHLDB3Q6NSJ2 640 aa14.9□□□□□ -0.02
TPM1-215ENST00000558868 C15orf39Q6ZRI6 1047 aa14.9□□□□□ -0.02
TPM1-215ENST00000558868 ZBTB33Q86T24 672 aa14.9□□□□□ -0.02
TPM1-215ENST00000558868 TRIB2Q92519 343 aa14.9□□□□□ -0.02
TPM1-215ENST00000558868 MTG1Q9BT17 334 aaPredicted RBP14.9□□□□□ -0.02
TPM1-215ENST00000558868 GCOM2Q9BZD3 368 aaPredicted RBP14.9□□□□□ -0.02
TPM1-215ENST00000558868 PTPRHQ9HD43 1115 aa14.9□□□□□ -0.02
TPM1-215ENST00000558868 CASP8AP2Q9UKL3 1982 aa14.9□□□□□ -0.02
TPM1-215ENST00000558868 EVPLQ92817 2033 aa14.9□□□□□ -0.02
TPM1-215ENST00000558868 C17orf102A2RUQ5 167 aa14.89□□□□□ -0.03
TPM1-215ENST00000558868 ABLIM1O14639 778 aa14.89□□□□□ -0.03
TPM1-215ENST00000558868 ERLIN2O94905 339 aa14.89□□□□□ -0.03
TPM1-215ENST00000558868 IL18RAPO95256 599 aa14.89□□□□□ -0.03
TPM1-215ENST00000558868 VTNP04004 478 aa14.89□□□□□ -0.03
TPM1-215ENST00000558868 CYP2C9P11712 490 aa14.89□□□□□ -0.03
TPM1-215ENST00000558868 ARHGAP25P42331 645 aa14.89□□□□□ -0.03
TPM1-215ENST00000558868 CHMP4BP1P59074 171 aa14.89□□□□□ -0.03
TPM1-215ENST00000558868 PURAQ00577 322 aaKnown RBP14.89□□□□□ -0.03
TPM1-215ENST00000558868 ZACNQ401N2 412 aa14.89□□□□□ -0.03
TPM1-215ENST00000558868 GJB7Q6PEY0 223 aa14.89□□□□□ -0.03
TPM1-215ENST00000558868 WDR49Q8IV35 697 aa14.89□□□□□ -0.03
TPM1-215ENST00000558868 NME8Q8N427 588 aa14.89□□□□□ -0.03
TPM1-215ENST00000558868 C7orf31Q8N865 590 aa14.89□□□□□ -0.03
TPM1-215ENST00000558868 TRPV1Q8NER1 839 aa14.89□□□□□ -0.03
TPM1-215ENST00000558868 LENG1Q96BZ8 264 aaPredicted RBP14.89□□□□□ -0.03
TPM1-215ENST00000558868 ZBTB10Q96DT7 871 aa14.89□□□□□ -0.03
TPM1-215ENST00000558868 POP1Q99575 1024 aaKnown RBP14.89□□□□□ -0.03
TPM1-215ENST00000558868 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.89□□□□□ -0.03
TPM1-215ENST00000558868 PDE11AQ9HCR9 933 aa14.89□□□□□ -0.03
TPM1-215ENST00000558868 CPSF3Q9UKF6 684 aaKnown RBP14.89□□□□□ -0.03
TPM1-215ENST00000558868 ATP8B3O60423 1300 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms