RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 SAFB2Q14151 953 aaKnown RBP eCLIP6.55□□□□□ -1.36
SYNE2-210ENST00000553455 RAB39AQ14964 217 aa6.55□□□□□ -1.36
SYNE2-210ENST00000553455 CNN3Q15417 329 aaKnown RBP6.55□□□□□ -1.36
SYNE2-210ENST00000553455 KHDC1Q4VXA5 237 aaKnown RBP6.55□□□□□ -1.36
SYNE2-210ENST00000553455 DAAM2Q86T65 1068 aa6.55□□□□□ -1.36
SYNE2-210ENST00000553455 KBTBD2Q8IY47 623 aa6.55□□□□□ -1.36
SYNE2-210ENST00000553455 SAMD3Q8N6K7 520 aa6.55□□□□□ -1.36
SYNE2-210ENST00000553455 C3orf20Q8ND61 904 aa6.55□□□□□ -1.36
SYNE2-210ENST00000553455 CDK5RAP3Q96JB5 506 aa6.55□□□□□ -1.36
SYNE2-210ENST00000553455 RPL10LQ96L21 214 aaKnown RBP6.55□□□□□ -1.36
SYNE2-210ENST00000553455 NT5C1BQ96P26 610 aa6.55□□□□□ -1.36
SYNE2-210ENST00000553455 RPS6KC1Q96S38 1066 aa6.55□□□□□ -1.36
SYNE2-210ENST00000553455 PTPN18Q99952 460 aa6.55□□□□□ -1.36
SYNE2-210ENST00000553455 VRK1Q99986 396 aaPredicted RBP6.55□□□□□ -1.36
SYNE2-210ENST00000553455 CALCOCO1Q9P1Z2 691 aa6.55□□□□□ -1.36
SYNE2-210ENST00000553455 AJAP1Q9UKB5 411 aaPredicted RBP6.55□□□□□ -1.36
SYNE2-210ENST00000553455 POLHQ9Y253 713 aa6.55□□□□□ -1.36
SYNE2-210ENST00000553455 SLC4A7Q9Y6M7 1214 aa6.55□□□□□ -1.36
SYNE2-210ENST00000553455 ATRNL1Q5VV63 1379 aa6.55□□□□□ -1.36
SYNE2-210ENST00000553455 CAPN8A6NHC0 703 aa6.54□□□□□ -1.36
SYNE2-210ENST00000553455 B4GALT3O60512 393 aa6.54□□□□□ -1.36
SYNE2-210ENST00000553455 NBPF7P0C2Y1 421 aaPredicted RBP6.54□□□□□ -1.36
SYNE2-210ENST00000553455 DDCP20711 480 aa6.54□□□□□ -1.36
SYNE2-210ENST00000553455 CASRP41180 1078 aa6.54□□□□□ -1.36
SYNE2-210ENST00000553455 RAP1GAPP47736 663 aa6.54□□□□□ -1.36
SYNE2-210ENST00000553455 ZNF280AP59817 542 aaPredicted RBP6.54□□□□□ -1.36
SYNE2-210ENST00000553455 SNAPC2Q13487 334 aa6.54□□□□□ -1.36
SYNE2-210ENST00000553455 PICALMQ13492 652 aa6.54□□□□□ -1.36
SYNE2-210ENST00000553455 KIAA0753Q2KHM9 967 aa6.54□□□□□ -1.36
SYNE2-210ENST00000553455 ZNF572Q7Z3I7 529 aaPredicted RBP6.54□□□□□ -1.36
SYNE2-210ENST00000553455 HEATR3Q7Z4Q2 680 aa6.54□□□□□ -1.36
SYNE2-210ENST00000553455 ADGRE4PQ86SQ3 457 aa6.54□□□□□ -1.36
SYNE2-210ENST00000553455 RSPH3Q86UC2 560 aa6.54□□□□□ -1.36
SYNE2-210ENST00000553455 TMEM151BQ8IW70 566 aa6.54□□□□□ -1.36
SYNE2-210ENST00000553455 DCBLD1Q8N8Z6 715 aa6.54□□□□□ -1.36
SYNE2-210ENST00000553455 MDM1Q8TC05 714 aa6.54□□□□□ -1.36
SYNE2-210ENST00000553455 SENP6Q9GZR1 1112 aaPredicted RBP6.54□□□□□ -1.36
SYNE2-210ENST00000553455 ATP6V0A4Q9HBG4 840 aa6.54□□□□□ -1.36
SYNE2-210ENST00000553455 NR2E1Q9Y466 385 aa6.54□□□□□ -1.36
SYNE2-210ENST00000553455 PCDHGB6Q9Y5F9 930 aa6.54□□□□□ -1.36
SYNE2-210ENST00000553455 PCDHA3Q9Y5H8 950 aa6.54□□□□□ -1.36
SYNE2-210ENST00000553455 NRP1O14786 923 aa6.53□□□□□ -1.36
SYNE2-210ENST00000553455 NOBOXO60393 691 aa6.53□□□□□ -1.36
SYNE2-210ENST00000553455 CNOT4O95628 575 aaKnown RBP6.53□□□□□ -1.36
SYNE2-210ENST00000553455 TYRP14679 529 aa6.53□□□□□ -1.36
SYNE2-210ENST00000553455 ALOX15P16050 662 aaPredicted RBP6.53□□□□□ -1.36
SYNE2-210ENST00000553455 MALP21145 153 aa6.53□□□□□ -1.36
SYNE2-210ENST00000553455 BIRC2Q13490 618 aa6.53□□□□□ -1.36
SYNE2-210ENST00000553455 RNF220Q5VTB9 566 aa6.53□□□□□ -1.36
SYNE2-210ENST00000553455 KRT40Q6A162 431 aa6.53□□□□□ -1.36
SYNE2-210ENST00000553455 MAEAQ7L5Y9 396 aa6.53□□□□□ -1.36
SYNE2-210ENST00000553455 CASKIN2Q8WXE0 1202 aa6.53□□□□□ -1.36
SYNE2-210ENST00000553455 RABGGTAQ92696 567 aa6.53□□□□□ -1.36
SYNE2-210ENST00000553455 CEP95Q96GE4 821 aa6.53□□□□□ -1.36
SYNE2-210ENST00000553455 MPHOSPH6Q99547 160 aaKnown RBP6.53□□□□□ -1.36
SYNE2-210ENST00000553455 NAA15Q9BXJ9 866 aaKnown RBP6.53□□□□□ -1.36
SYNE2-210ENST00000553455 CHMP4AQ9BY43 222 aa6.53□□□□□ -1.36
SYNE2-210ENST00000553455 C22orf23Q9BZE7 217 aa6.53□□□□□ -1.36
SYNE2-210ENST00000553455 ARMT1Q9H993 441 aa6.53□□□□□ -1.36
SYNE2-210ENST00000553455 LMBRD1Q9NUN5 540 aa6.53□□□□□ -1.36
SYNE2-210ENST00000553455 ACTL7AQ9Y615 435 aa6.53□□□□□ -1.36
SYNE2-210ENST00000553455 NT5C1B-RDH14C9J2C7 533 aa6.52□□□□□ -1.37
SYNE2-210ENST00000553455 GOLIM4O00461 696 aa6.52□□□□□ -1.37
SYNE2-210ENST00000553455 SLC26A4O43511 780 aa6.52□□□□□ -1.37
SYNE2-210ENST00000553455 NUAK1O60285 661 aa6.52□□□□□ -1.37
SYNE2-210ENST00000553455 PEX2P28328 305 aa6.52□□□□□ -1.37
SYNE2-210ENST00000553455 PTPN7P35236 360 aa6.52□□□□□ -1.37
SYNE2-210ENST00000553455 ALDH1A3P47895 512 aa6.52□□□□□ -1.37
SYNE2-210ENST00000553455 SP140Q13342 867 aa6.52□□□□□ -1.37
SYNE2-210ENST00000553455 PLS1Q14651 629 aa6.52□□□□□ -1.37
SYNE2-210ENST00000553455 CCDC157Q569K6 752 aa6.52□□□□□ -1.37
SYNE2-210ENST00000553455 MFSD14BQ5SR56 506 aa6.52□□□□□ -1.37
SYNE2-210ENST00000553455 TCERG1LQ5VWI1 586 aa6.52□□□□□ -1.37
SYNE2-210ENST00000553455 DARS2Q6PI48 645 aaKnown RBP6.52□□□□□ -1.37
SYNE2-210ENST00000553455 APOA5Q6Q788 366 aa6.52□□□□□ -1.37
SYNE2-210ENST00000553455 CMTM4Q8IZR5 234 aa6.52□□□□□ -1.37
SYNE2-210ENST00000553455 STON2Q8WXE9 905 aa6.52□□□□□ -1.37
SYNE2-210ENST00000553455 SLC35A4Q96G79 324 aa6.52□□□□□ -1.37
SYNE2-210ENST00000553455 STRBPQ96SI9 672 aaKnown RBP6.52□□□□□ -1.37
SYNE2-210ENST00000553455 CDC5LQ99459 802 aaKnown RBP6.52□□□□□ -1.37
SYNE2-210ENST00000553455 KCNH6Q9H252 994 aa6.52□□□□□ -1.37
SYNE2-210ENST00000553455 ZMAT3Q9HA38 289 aaKnown RBP6.52□□□□□ -1.37
SYNE2-210ENST00000553455 IL23AQ9NPF7 189 aa6.52□□□□□ -1.37
SYNE2-210ENST00000553455 TMEM140Q9NV12 185 aa6.52□□□□□ -1.37
SYNE2-210ENST00000553455 ABCF2Q9UG63 623 aa6.52□□□□□ -1.37
SYNE2-210ENST00000553455 STAP2Q9UGK3 403 aa6.52□□□□□ -1.37
SYNE2-210ENST00000553455 PHTF1Q9UMS5 762 aa6.52□□□□□ -1.37
SYNE2-210ENST00000553455 ZMYM3Q14202 1370 aa6.52□□□□□ -1.37
SYNE2-210ENST00000553455 PMS2P1A4D2B8 440 aa6.51□□□□□ -1.37
SYNE2-210ENST00000553455 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.51□□□□□ -1.37
SYNE2-210ENST00000553455 TPD52L2O43399 206 aaKnown RBP6.51□□□□□ -1.37
SYNE2-210ENST00000553455 ARIH2O95376 493 aa6.51□□□□□ -1.37
SYNE2-210ENST00000553455 CACNB3P54284 484 aa6.51□□□□□ -1.37
SYNE2-210ENST00000553455 CTXN1P60606 82 aa6.51□□□□□ -1.37
SYNE2-210ENST00000553455 GPSM2P81274 684 aa6.51□□□□□ -1.37
SYNE2-210ENST00000553455 BRD3Q15059 726 aa6.51□□□□□ -1.37
SYNE2-210ENST00000553455 GADL1Q6ZQY3 521 aa6.51□□□□□ -1.37
SYNE2-210ENST00000553455 LRTOMTQ8WZ04 291 aa6.51□□□□□ -1.37
SYNE2-210ENST00000553455 FAM167AQ96KS9 214 aa6.51□□□□□ -1.37
SYNE2-210ENST00000553455 FMNL2Q96PY5 1086 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms