RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 TAS1R3Q7RTX0 852 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 ZNF720Q7Z2F6 126 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 KLHL23Q8NBE8 558 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 POF1BQ8WVV4 589 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 PPM1EQ8WY54 764 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 POMGNT1Q8WZA1 660 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 KCNN1Q92952 543 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 DNAJC19Q96DA6 116 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 CHAMP1Q96JM3 812 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 ZFP42Q96MM3 310 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 UROC1Q96N76 676 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 IPO9Q96P70 1041 aaKnown RBP5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 GBP4Q96PP9 640 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 MSTO1Q9BUK6 570 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 COLEC11Q9BWP8 271 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 BLZF1Q9H2G9 400 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 NSUN3Q9H649 340 aaKnown RBP5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 CWH43Q9H720 699 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 TLR9Q9NR96 1032 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 RMND1Q9NWS8 449 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 KLK14Q9P0G3 267 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 PLAGL2Q9UPG8 496 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 LZTS1Q9Y250 596 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 USP20Q9Y2K6 914 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 FAN1Q9Y2M0 1017 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 MTCH2Q9Y6C9 303 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 EVPLQ92817 2033 aa5.9□□□□□ -1.47
HMGB1P40-201ENST00000525121 FAM237AA0A1B0GTK4 181 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 TTLL13PA6NNM8 815 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 MEIS3P2A8K0S8 358 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 GOLGA6L22H0YM25 854 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 RBAK-RBAKDNI3L0D1 243 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 KIAA0391O15091 583 aaKnown RBP5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 GRM6O15303 877 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 NCK2O43639 380 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 TADA2AO75478 443 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 ZNF202O95125 648 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 LDHAP00338 332 aaKnown RBP5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 EDN1P05305 212 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 ITGB1P05556 798 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 URODP06132 367 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 GALTP07902 379 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 MYBP10242 640 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 POU3F3P20264 500 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 PROZP22891 400 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 PBX3P40426 434 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 SLC11A1P49279 550 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 PLCB3Q01970 1234 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 CREMQ03060 361 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 PSMD2Q13200 908 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 TUSC3Q13454 348 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 CUL4BQ13620 913 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 ADGRE1Q14246 886 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 SMC1AQ14683 1233 aaKnown RBP5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 CCDC85BQ15834 202 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 AAK1Q2M2I8 961 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 ZC2HC1CQ53FD0 456 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 KIAA1841Q6NSI8 718 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 ARMCX5Q6P1M9 558 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 ELMSAN1Q6PJG2 1045 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 KRBA2Q6ZNG9 492 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 LRRC55Q6ZSA7 311 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 EP400NLQ6ZTU2 488 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 TMC7Q7Z402 723 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 SPRED2Q7Z698 418 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 CD302Q8IX05 232 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 SLC39A11Q8N1S5 342 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 GOLGA5Q8TBA6 731 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 NOC3LQ8WTT2 800 aaKnown RBP5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 FAM212AQ96EL1 285 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 DDX27Q96GQ7 796 aaKnown RBP5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 PAGE5Q96GU1 130 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 SNX27Q96L92 541 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 TSPAN18Q96SJ8 248 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 TCF25Q9BQ70 676 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 GTPBP4Q9BZE4 634 aaKnown RBP5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 RNF39Q9H2S5 420 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 NRDE2Q9H7Z3 1164 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 RPF1Q9H9Y2 349 aaKnown RBP5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 PLEKHA5Q9HAU0 1116 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 PTPRHQ9HD43 1115 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 ALG13Q9NP73 1137 aaKnown RBP5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 NGRNQ9NPE2 291 aaKnown RBP5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 HCSTQ9UBK5 93 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 AGO2Q9UKV8 859 aaKnown RBP5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 HPSEQ9Y251 543 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 SSX2IPQ9Y2D8 614 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 PRG3Q9Y2Y8 225 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 SF3B1O75533 1304 aaKnown RBP eCLIP5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 TTC3P53804 2025 aa5.89□□□□□ -1.47
HMGB1P40-201ENST00000525121 PTPRSQ13332 1948 aa5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 A0A0B4J269 797 aa5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 CASTOR2A6NHX0 329 aa5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 SPDYE4A6NLX3 237 aa5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 NT5C1B-RDH14C9J2C7 533 aa5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 NRP1O14786 923 aa5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 TRAPPC3O43617 180 aa5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 PPP1R37O75864 691 aa5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 PRPF6O94906 941 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms