RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 RRBP1Q9P2E9 1410 aaKnown RBP5.51□□□□□ -1.53
HMGB3P13-201ENST00000511263 KIAA1107Q9UPP5 1409 aa5.51□□□□□ -1.53
HMGB3P13-201ENST00000511263 CTTNBP2Q8WZ74 1663 aa5.51□□□□□ -1.53
HMGB3P13-201ENST00000511263 MATN2O00339 956 aa5.51□□□□□ -1.53
HMGB3P13-201ENST00000511263 ZNF500O60304 480 aaPredicted RBP5.51□□□□□ -1.53
HMGB3P13-201ENST00000511263 PRAMEF4O60810 478 aa5.51□□□□□ -1.53
HMGB3P13-201ENST00000511263 TACR2P21452 398 aa5.51□□□□□ -1.53
HMGB3P13-201ENST00000511263 MSX2P35548 267 aaPredicted RBP5.51□□□□□ -1.53
HMGB3P13-201ENST00000511263 CD69Q07108 199 aa5.51□□□□□ -1.53
HMGB3P13-201ENST00000511263 FAM50AQ14320 339 aaKnown RBP5.51□□□□□ -1.53
HMGB3P13-201ENST00000511263 ICAM4Q14773 271 aa5.51□□□□□ -1.53
HMGB3P13-201ENST00000511263 RINLQ6ZS11 566 aa5.51□□□□□ -1.53
HMGB3P13-201ENST00000511263 GAREM2Q75VX8 874 aa5.51□□□□□ -1.53
HMGB3P13-201ENST00000511263 ZFPM1Q8IX07 1006 aa5.51□□□□□ -1.53
HMGB3P13-201ENST00000511263 OR5M3Q8NGP4 307 aa5.51□□□□□ -1.53
HMGB3P13-201ENST00000511263 MIEF2Q96C03 454 aa5.51□□□□□ -1.53
HMGB3P13-201ENST00000511263 ORAI2Q96SN7 254 aa5.51□□□□□ -1.53
HMGB3P13-201ENST00000511263 ADOQ96SZ5 270 aa5.51□□□□□ -1.53
HMGB3P13-201ENST00000511263 DNAJC28Q9NX36 388 aa5.51□□□□□ -1.53
HMGB3P13-201ENST00000511263 TSC22D4Q9Y3Q8 395 aa5.51□□□□□ -1.53
HMGB3P13-201ENST00000511263 SPEF1Q9Y4P9 236 aa5.51□□□□□ -1.53
HMGB3P13-201ENST00000511263 RPTORQ8N122 1335 aa5.5□□□□□ -1.53
HMGB3P13-201ENST00000511263 MYOM3Q5VTT5 1437 aa5.5□□□□□ -1.53
HMGB3P13-201ENST00000511263 A0A0A6YYK5 440 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P13-201ENST00000511263 UBE2QL1A1L167 161 aa5.5□□□□□ -1.53
HMGB3P13-201ENST00000511263 HMGB1P1B2RPK0 211 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P13-201ENST00000511263 FOXS1O43638 330 aa5.5□□□□□ -1.53
HMGB3P13-201ENST00000511263 PRKD3O94806 890 aa5.5□□□□□ -1.53
HMGB3P13-201ENST00000511263 LPLP06858 475 aa5.5□□□□□ -1.53
HMGB3P13-201ENST00000511263 GNAT2P19087 354 aa5.5□□□□□ -1.53
HMGB3P13-201ENST00000511263 GUCY2FP51841 1108 aa5.5□□□□□ -1.53
HMGB3P13-201ENST00000511263 HMGA2P52926 109 aa5.5□□□□□ -1.53
HMGB3P13-201ENST00000511263 KLF1Q13351 362 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P13-201ENST00000511263 PDCD1Q15116 288 aa5.5□□□□□ -1.53
HMGB3P13-201ENST00000511263 PTPROQ16827 1216 aa5.5□□□□□ -1.53
HMGB3P13-201ENST00000511263 MUM1L1Q5H9M0 696 aa5.5□□□□□ -1.53
HMGB3P13-201ENST00000511263 FKBP15Q5T1M5 1219 aa5.5□□□□□ -1.53
HMGB3P13-201ENST00000511263 ZNF585AQ6P3V2 769 aa5.5□□□□□ -1.53
HMGB3P13-201ENST00000511263 BTNL9Q6UXG8 535 aa5.5□□□□□ -1.53
HMGB3P13-201ENST00000511263 CDC5LQ99459 802 aaKnown RBP5.5□□□□□ -1.53
HMGB3P13-201ENST00000511263 SOX7Q9BT81 388 aa5.5□□□□□ -1.53
HMGB3P13-201ENST00000511263 ACE2Q9BYF1 805 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P13-201ENST00000511263 MS4A5Q9H3V2 200 aa5.5□□□□□ -1.53
HMGB3P13-201ENST00000511263 CD248Q9HCU0 757 aa5.5□□□□□ -1.53
HMGB3P13-201ENST00000511263 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.5□□□□□ -1.53
HMGB3P13-201ENST00000511263 DPP7Q9UHL4 492 aa5.5□□□□□ -1.53
HMGB3P13-201ENST00000511263 SAP30BPQ9UHR5 308 aaKnown RBP5.5□□□□□ -1.53
HMGB3P13-201ENST00000511263 EVLQ9UI08 416 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P13-201ENST00000511263 TMPRSS11EQ9UL52 423 aa5.5□□□□□ -1.53
HMGB3P13-201ENST00000511263 GIT1Q9Y2X7 761 aa5.5□□□□□ -1.53
HMGB3P13-201ENST00000511263 KNSTRNQ9Y448 316 aa5.5□□□□□ -1.53
HMGB3P13-201ENST00000511263 ZBED9Q6R2W3 1325 aa5.49□□□□□ -1.53
HMGB3P13-201ENST00000511263 ARHGEF11O15085 1522 aa5.49□□□□□ -1.53
HMGB3P13-201ENST00000511263 A0A1W2PR48 441 aa5.49□□□□□ -1.53
HMGB3P13-201ENST00000511263 CAPN14A8MX76 684 aa5.49□□□□□ -1.53
HMGB3P13-201ENST00000511263 GOLGA6L6A8MZA4 724 aa5.49□□□□□ -1.53
HMGB3P13-201ENST00000511263 ANP32CO43423 234 aa5.49□□□□□ -1.53
HMGB3P13-201ENST00000511263 OFD1O75665 1012 aa5.49□□□□□ -1.53
HMGB3P13-201ENST00000511263 CCDC172P0C7W6 258 aa5.49□□□□□ -1.53
HMGB3P13-201ENST00000511263 ACO1P21399 889 aaKnown RBP5.49□□□□□ -1.53
HMGB3P13-201ENST00000511263 HIBADHP31937 336 aaKnown RBP5.49□□□□□ -1.53
HMGB3P13-201ENST00000511263 MUM1Q2TAK8 710 aa5.49□□□□□ -1.53
HMGB3P13-201ENST00000511263 APBB1IPQ7Z5R6 666 aaPredicted RBP5.49□□□□□ -1.53
HMGB3P13-201ENST00000511263 ANKRD13AQ8IZ07 590 aa5.49□□□□□ -1.53
HMGB3P13-201ENST00000511263 GPR135Q8IZ08 494 aa5.49□□□□□ -1.53
HMGB3P13-201ENST00000511263 FAM9BQ8IZU0 186 aa5.49□□□□□ -1.53
HMGB3P13-201ENST00000511263 CNTD1Q8N815 330 aa5.49□□□□□ -1.53
HMGB3P13-201ENST00000511263 GLB1L3Q8NCI6 653 aaPredicted RBP5.49□□□□□ -1.53
HMGB3P13-201ENST00000511263 SNX33Q8WV41 574 aa5.49□□□□□ -1.53
HMGB3P13-201ENST00000511263 TIGD1Q96MW7 591 aa5.49□□□□□ -1.53
HMGB3P13-201ENST00000511263 NCAPGQ9BPX3 1015 aa5.49□□□□□ -1.53
HMGB3P13-201ENST00000511263 ADI1Q9BV57 179 aa5.49□□□□□ -1.53
HMGB3P13-201ENST00000511263 IFT122Q9HBG6 1241 aa5.49□□□□□ -1.53
HMGB3P13-201ENST00000511263 PCDH12Q9NPG4 1184 aa5.49□□□□□ -1.53
HMGB3P13-201ENST00000511263 MKS1Q9NXB0 559 aa5.49□□□□□ -1.53
HMGB3P13-201ENST00000511263 CALCOCO1Q9P1Z2 691 aa5.49□□□□□ -1.53
HMGB3P13-201ENST00000511263 CGNQ9P2M7 1197 aaKnown RBP5.49□□□□□ -1.53
HMGB3P13-201ENST00000511263 EDARQ9UNE0 448 aa5.49□□□□□ -1.53
HMGB3P13-201ENST00000511263 PLEKHH2Q8IVE3 1493 aa5.49□□□□□ -1.53
HMGB3P13-201ENST00000511263 HECW1Q76N89 1606 aa5.48□□□□□ -1.53
HMGB3P13-201ENST00000511263 ROCK1Q13464 1354 aa5.48□□□□□ -1.53
HMGB3P13-201ENST00000511263 hCG_2014768A0A024R1R8 64 aa5.48□□□□□ -1.53
HMGB3P13-201ENST00000511263 LCHNA4D1U4 455 aa5.48□□□□□ -1.53
HMGB3P13-201ENST00000511263 CRHR1P34998 444 aa5.48□□□□□ -1.53
HMGB3P13-201ENST00000511263 GZMKP49863 264 aa5.48□□□□□ -1.53
HMGB3P13-201ENST00000511263 HNRNPMP52272 730 aaKnown RBP eCLIP5.48□□□□□ -1.53
HMGB3P13-201ENST00000511263 CDK17Q00537 523 aa5.48□□□□□ -1.53
HMGB3P13-201ENST00000511263 ITKQ08881 620 aa5.48□□□□□ -1.53
HMGB3P13-201ENST00000511263 FOXL1Q12952 345 aa5.48□□□□□ -1.53
HMGB3P13-201ENST00000511263 DUSP8Q13202 625 aa5.48□□□□□ -1.53
HMGB3P13-201ENST00000511263 CRHR2Q13324 411 aa5.48□□□□□ -1.53
HMGB3P13-201ENST00000511263 MTA1Q13330 715 aa5.48□□□□□ -1.53
HMGB3P13-201ENST00000511263 TRIM25Q14258 630 aaKnown RBP5.48□□□□□ -1.53
HMGB3P13-201ENST00000511263 CLUL1Q15846 466 aa5.48□□□□□ -1.53
HMGB3P13-201ENST00000511263 METTL24Q5JXM2 366 aa5.48□□□□□ -1.53
HMGB3P13-201ENST00000511263 MBNL2Q5VZF2 373 aaKnown RBP5.48□□□□□ -1.53
HMGB3P13-201ENST00000511263 CRIP3Q6Q6R5 217 aa5.48□□□□□ -1.53
HMGB3P13-201ENST00000511263 FAM83AQ86UY5 434 aa5.48□□□□□ -1.53
HMGB3P13-201ENST00000511263 MSL3Q8N5Y2 521 aaKnown RBP5.48□□□□□ -1.53
HMGB3P13-201ENST00000511263 PIK3C3Q8NEB9 887 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms