RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, human

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-216	ENST00000509784	COL23A1	Q86Y22	540 aa	Predicted RBP	3.94	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	KIAA0319L	Q8IZA0	1049 aa		3.94	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	FAM43A	Q8N2R8	423 aa		3.94	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	ZGPAT	Q8N5A5	531 aa	Known RBP	3.94	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	SH2D3C	Q8N5H7	860 aa		3.94	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	LILRA3	Q8N6C8	439 aa	Predicted RBP	3.94	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	TP53I13	Q8NBR0	393 aa	Predicted RBP	3.94	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	C3orf20	Q8ND61	904 aa		3.94	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	OR5M3	Q8NGP4	307 aa		3.94	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	SVIP	Q8NHG7	77 aa		3.94	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	MDM1	Q8TC05	714 aa		3.94	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	LPP	Q93052	612 aa		3.94	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	CDK5RAP3	Q96JB5	506 aa		3.94	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	DMRTA2	Q96SC8	542 aa		3.94	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	PSMD1	Q99460	953 aa		3.94	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	VRK1	Q99986	396 aa	Predicted RBP	3.94	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	CHMP4A	Q9BY43	222 aa		3.94	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	SLC6A15	Q9H2J7	730 aa		3.94	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	BHMT2	Q9H2M3	363 aa		3.94	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	LANCL2	Q9NS86	450 aa		3.94	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	AJAP1	Q9UKB5	411 aa	Predicted RBP	3.94	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	L1RE1	Q9UN81	338 aa		3.94	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	POLH	Q9Y253	713 aa		3.94	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	NR2E1	Q9Y466	385 aa		3.94	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	RNF114	Q9Y508	228 aa		3.94	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	PCDHA3	Q9Y5H8	950 aa		3.94	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	TOP2B	Q02880	1626 aa		3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	ANO9	A1A5B4	782 aa		3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	CFAP69	A5D8W1	941 aa		3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	MROH6	A6NGR9	719 aa		3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	CAPN8	A6NHC0	703 aa		3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	C9orf118	A6NHY6	69 aa		3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784		H3BUI4	141 aa		3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	ARHGAP6	O43182	974 aa		3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	TPD52L2	O43399	206 aa	Known RBP	3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	NUAK1	O60285	661 aa		3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	B4GALT4	O60513	344 aa		3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	PQBP1	O60828	265 aa	Known RBP	3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	TSPAN15	O95858	294 aa		3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	GAST	P01350	101 aa		3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	HRG	P04196	525 aa		3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	JUN	P05412	331 aa	Known RBP	3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	MYL3	P08590	195 aa		3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	PHKG2	P15735	406 aa		3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	DDC	P20711	480 aa		3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	CRHR1	P34998	444 aa		3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	CASR	P41180	1078 aa		3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	AGFG1	P52594	562 aa	Known RBP	3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	HK3	P52790	923 aa		3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	FAM193A	P78312	1265 aa		3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	RNF151	Q2KHN1	245 aa		3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	ZNF568	Q3ZCX4	644 aa		3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	PRAMEF14	Q5SWL7	426 aa		3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	RNF220	Q5VTB9	566 aa		3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	OGFOD2	Q6N063	350 aa		3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	DARS2	Q6PI48	645 aa	Known RBP	3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	KBTBD2	Q8IY47	623 aa		3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	TRMT2A	Q8IZ69	625 aa	Known RBP	3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	LINC01356	Q8N9X3	169 aa		3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	PLBD2	Q8NHP8	589 aa		3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	IFI44	Q8TCB0	444 aa		3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	PARD3B	Q8TEW8	1205 aa		3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	MBD6	Q96DN6	1003 aa		3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	CYFIP2	Q96F07	1278 aa		3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	MRGPRX4	Q96LA9	322 aa		3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	NT5C1B	Q96P26	610 aa		3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	CDC5L	Q99459	802 aa	Known RBP	3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	ANP32E	Q9BTT0	268 aa		3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	APOL5	Q9BWW9	433 aa		3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	LMBRD1	Q9NUN5	540 aa		3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	TMEM140	Q9NV12	185 aa		3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	ABCF2	Q9UG63	623 aa		3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	STAP2	Q9UGK3	403 aa		3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	RUVBL1	Q9Y265	456 aa	Known RBP	3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	ACTL7A	Q9Y615	435 aa		3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	RRBP1	Q9P2E9	1410 aa	Known RBP	3.93	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	RAPGEF2	Q9Y4G8	1499 aa		3.92	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	GOLIM4	O00461	696 aa		3.92	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	WNT10B	O00744	389 aa		3.92	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	NRP1	O14786	923 aa		3.92	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	MTSS1	O43312	755 aa		3.92	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	GPR32	O75388	356 aa		3.92	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	SASH1	O94885	1247 aa		3.92	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	MAL	P21145	153 aa		3.92	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	FPR1	P21462	350 aa		3.92	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	SMARCA1	P28370	1054 aa		3.92	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	PCSK1	P29120	753 aa		3.92	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	IL12RB1	P42701	662 aa		3.92	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	SLURP1	P55000	103 aa		3.92	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	ZNF280A	P59817	542 aa	Predicted RBP	3.92	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	RAB1A	P62820	205 aa		3.92	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	NKX6-1	P78426	367 aa	Predicted RBP	3.92	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	HGFAC	Q04756	655 aa		3.92	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	SNAPC2	Q13487	334 aa		3.92	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	PLS1	Q14651	629 aa		3.92	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	RAB39A	Q14964	217 aa		3.92	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	CNN3	Q15417	329 aa	Known RBP	3.92	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	PKN1	Q16512	942 aa		3.92	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	TCERG1L	Q5VWI1	586 aa		3.92	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	SWSAP1	Q6NVH7	229 aa		3.92	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 45 ms