RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 BRD1O95696 1058 aa22.02■■□□□ 1.12
UBE2D3-220ENST00000505307 THP07101 528 aa22.02■■□□□ 1.12
UBE2D3-220ENST00000505307 AVPR2P30518 371 aa22.02■■□□□ 1.12
UBE2D3-220ENST00000505307 HSP90AA2PQ14568 343 aaPredicted RBP22.02■■□□□ 1.12
UBE2D3-220ENST00000505307 DCAF4L1Q3SXM0 396 aa22.02■■□□□ 1.12
UBE2D3-220ENST00000505307 IGSF22Q8N9C0 903 aa22.02■■□□□ 1.12
UBE2D3-220ENST00000505307 STAMQ92783 540 aa22.02■■□□□ 1.12
UBE2D3-220ENST00000505307 GPR62Q9BZJ7 368 aa22.02■■□□□ 1.12
UBE2D3-220ENST00000505307 KIAA1024Q9UPX6 916 aa22.02■■□□□ 1.12
UBE2D3-220ENST00000505307 WDFY4Q6ZS81 3184 aa22.02■■□□□ 1.12
UBE2D3-220ENST00000505307 MYO10Q9HD67 2058 aa22.02■■□□□ 1.11
UBE2D3-220ENST00000505307 CCDC195A0A1B0GUA6 201 aa22.01■■□□□ 1.11
UBE2D3-220ENST00000505307 F8W810 466 aa22.01■■□□□ 1.11
UBE2D3-220ENST00000505307 PRPHP41219 470 aa22.01■■□□□ 1.11
UBE2D3-220ENST00000505307 PTGDRQ13258 359 aa22.01■■□□□ 1.11
UBE2D3-220ENST00000505307 RABEP1Q15276 862 aa22.01■■□□□ 1.11
UBE2D3-220ENST00000505307 C8orf34Q49A92 452 aa22.01■■□□□ 1.11
UBE2D3-220ENST00000505307 IER5LQ5T953 404 aa22.01■■□□□ 1.11
UBE2D3-220ENST00000505307 PRSS33Q8NF86 280 aa22.01■■□□□ 1.11
UBE2D3-220ENST00000505307 SNTG2Q9NY99 539 aa22.01■■□□□ 1.11
UBE2D3-220ENST00000505307 DNM3Q9UQ16 869 aa22.01■■□□□ 1.11
UBE2D3-220ENST00000505307 PHLPP2Q6ZVD8 1323 aa22.01■■□□□ 1.11
UBE2D3-220ENST00000505307 ST18O60284 1047 aa22■■□□□ 1.11
UBE2D3-220ENST00000505307 RECQL4O94761 1208 aa22■■□□□ 1.11
UBE2D3-220ENST00000505307 ASGR2P07307 311 aa22■■□□□ 1.11
UBE2D3-220ENST00000505307 MRE11P49959 708 aa22■■□□□ 1.11
UBE2D3-220ENST00000505307 TOB1P50616 345 aaPredicted RBP22■■□□□ 1.11
UBE2D3-220ENST00000505307 ELAVL2Q12926 359 aaKnown RBP22■■□□□ 1.11
UBE2D3-220ENST00000505307 ECM1Q16610 540 aa22■■□□□ 1.11
UBE2D3-220ENST00000505307 KRT79Q5XKE5 535 aa22■■□□□ 1.11
UBE2D3-220ENST00000505307 SNX29Q8TEQ0 813 aa22■■□□□ 1.11
UBE2D3-220ENST00000505307 RIN2Q8WYP3 895 aaPredicted RBP22■■□□□ 1.11
UBE2D3-220ENST00000505307 WDR6Q9NNW5 1121 aaKnown RBP22■■□□□ 1.11
UBE2D3-220ENST00000505307 DDX19AQ9NUU7 478 aaKnown RBP22■■□□□ 1.11
UBE2D3-220ENST00000505307 ZDHHC7Q9NXF8 308 aa22■■□□□ 1.11
UBE2D3-220ENST00000505307 TTLL13PA6NNM8 815 aa21.99■■□□□ 1.11
UBE2D3-220ENST00000505307 NBR1Q14596 966 aa21.99■■□□□ 1.11
UBE2D3-220ENST00000505307 PDXDC1Q6P996 788 aa21.99■■□□□ 1.11
UBE2D3-220ENST00000505307 IGSF9Q9P2J2 1179 aa21.99■■□□□ 1.11
UBE2D3-220ENST00000505307 PCDHB6Q9Y5E3 794 aa21.99■■□□□ 1.11
UBE2D3-220ENST00000505307 DENND4AQ7Z401 1863 aa21.98■■□□□ 1.11
UBE2D3-220ENST00000505307 K7ERI5 159 aa21.98■■□□□ 1.11
UBE2D3-220ENST00000505307 PTGESO14684 152 aa21.98■■□□□ 1.11
UBE2D3-220ENST00000505307 LIG1P18858 919 aa21.98■■□□□ 1.11
UBE2D3-220ENST00000505307 VCPP55072 806 aaKnown RBP21.98■■□□□ 1.11
UBE2D3-220ENST00000505307 TDGQ13569 410 aa21.98■■□□□ 1.11
UBE2D3-220ENST00000505307 ATF7IP2Q5U623 682 aa21.98■■□□□ 1.11
UBE2D3-220ENST00000505307 LILRA6Q6PI73 481 aa21.98■■□□□ 1.11
UBE2D3-220ENST00000505307 DTHD1Q6ZMT9 781 aa21.98■■□□□ 1.11
UBE2D3-220ENST00000505307 PALB2Q86YC2 1186 aa21.98■■□□□ 1.11
UBE2D3-220ENST00000505307 KCTD17Q8N5Z5 321 aa21.98■■□□□ 1.11
UBE2D3-220ENST00000505307 SMG7Q92540 1137 aaKnown RBP21.98■■□□□ 1.11
UBE2D3-220ENST00000505307 TTPALQ9BTX7 342 aa21.98■■□□□ 1.11
UBE2D3-220ENST00000505307 CASTOR2A6NHX0 329 aa21.97■■□□□ 1.11
UBE2D3-220ENST00000505307 TGM5O43548 720 aa21.97■■□□□ 1.11
UBE2D3-220ENST00000505307 RILPL1Q5EBL4 403 aa21.97■■□□□ 1.11
UBE2D3-220ENST00000505307 PIK3R5Q8WYR1 880 aa21.97■■□□□ 1.11
UBE2D3-220ENST00000505307 B3GALT6Q96L58 329 aa21.97■■□□□ 1.11
UBE2D3-220ENST00000505307 DRC1Q96MC2 740 aa21.97■■□□□ 1.11
UBE2D3-220ENST00000505307 TIPINQ9BVW5 301 aa21.97■■□□□ 1.11
UBE2D3-220ENST00000505307 NT5C3AQ9H0P0 336 aa21.97■■□□□ 1.11
UBE2D3-220ENST00000505307 C17orf75Q9HAS0 396 aa21.97■■□□□ 1.11
UBE2D3-220ENST00000505307 KCNG1Q9UIX4 513 aa21.97■■□□□ 1.11
UBE2D3-220ENST00000505307 TNFSF13BQ9Y275 285 aa21.97■■□□□ 1.11
UBE2D3-220ENST00000505307 RBM19Q9Y4C8 960 aaKnown RBP21.97■■□□□ 1.11
UBE2D3-220ENST00000505307 CLUHO75153 1309 aa21.97■■□□□ 1.11
UBE2D3-220ENST00000505307 RFPL2O75678 378 aa21.96■■□□□ 1.11
UBE2D3-220ENST00000505307 TCF15Q12870 199 aa21.96■■□□□ 1.11
UBE2D3-220ENST00000505307 DMP1Q13316 513 aaPredicted RBP21.96■■□□□ 1.11
UBE2D3-220ENST00000505307 NAB2Q15742 525 aa21.96■■□□□ 1.11
UBE2D3-220ENST00000505307 NT5DC1Q5TFE4 455 aa21.96■■□□□ 1.11
UBE2D3-220ENST00000505307 FAM171A1Q5VUB5 890 aa21.96■■□□□ 1.11
UBE2D3-220ENST00000505307 EEF1DP3Q658K8 133 aa21.96■■□□□ 1.11
UBE2D3-220ENST00000505307 FEZF2Q8TBJ5 459 aa21.96■■□□□ 1.11
UBE2D3-220ENST00000505307 RABGGTAQ92696 567 aa21.96■■□□□ 1.11
UBE2D3-220ENST00000505307 NXPE3Q969Y0 559 aa21.96■■□□□ 1.11
UBE2D3-220ENST00000505307 PAAF1Q9BRP4 392 aa21.96■■□□□ 1.11
UBE2D3-220ENST00000505307 KIFC3Q9BVG8 833 aa21.96■■□□□ 1.11
UBE2D3-220ENST00000505307 PRKD2Q9BZL6 878 aa21.96■■□□□ 1.11
UBE2D3-220ENST00000505307 TMEM134Q9H6X4 195 aa21.96■■□□□ 1.11
UBE2D3-220ENST00000505307 KCNK12Q9HB15 430 aa21.96■■□□□ 1.11
UBE2D3-220ENST00000505307 PIDD1Q9HB75 910 aa21.96■■□□□ 1.11
UBE2D3-220ENST00000505307 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.96■■□□□ 1.11
UBE2D3-220ENST00000505307 GDAQ9Y2T3 454 aa21.96■■□□□ 1.11
UBE2D3-220ENST00000505307 KMT2EQ8IZD2 1858 aa21.95■■□□□ 1.1
UBE2D3-220ENST00000505307 TMEM189-UBE2V1I3L0A0 370 aa21.95■■□□□ 1.1
UBE2D3-220ENST00000505307 KIF4AO95239 1232 aa21.95■■□□□ 1.1
UBE2D3-220ENST00000505307 PDGFBP01127 241 aaPredicted RBP21.95■■□□□ 1.1
UBE2D3-220ENST00000505307 EDN1P05305 212 aa21.95■■□□□ 1.1
UBE2D3-220ENST00000505307 RTP2Q5QGT7 225 aa21.95■■□□□ 1.1
UBE2D3-220ENST00000505307 ZNF707Q96C28 371 aaPredicted RBP21.95■■□□□ 1.1
UBE2D3-220ENST00000505307 UROC1Q96N76 676 aa21.95■■□□□ 1.1
UBE2D3-220ENST00000505307 MFSD1Q9H3U5 465 aa21.95■■□□□ 1.1
UBE2D3-220ENST00000505307 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.95■■□□□ 1.16e-9■□□□□ 11.3
UBE2D3-220ENST00000505307 EPS15L1Q9UBC2 864 aa21.95■■□□□ 1.1
UBE2D3-220ENST00000505307 DUSP12Q9UNI6 340 aa21.95■■□□□ 1.1
UBE2D3-220ENST00000505307 CCDC169A6NNP5 214 aa21.94■■□□□ 1.1
UBE2D3-220ENST00000505307 E9PMD0 336 aa21.94■■□□□ 1.1
UBE2D3-220ENST00000505307 ZMYND10O75800 440 aa21.94■■□□□ 1.1
UBE2D3-220ENST00000505307 SPATA31D3P0C874 917 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms