RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 ARHGAP45Q92619 1136 aa6.23□□□□□ -1.41
PTPN4-210ENST00000485247 WDR89Q96FK6 387 aaPredicted RBP6.23□□□□□ -1.41
PTPN4-210ENST00000485247 STRBPQ96SI9 672 aaKnown RBP6.23□□□□□ -1.41
PTPN4-210ENST00000485247 C16orf70Q9BSU1 422 aa6.23□□□□□ -1.41
PTPN4-210ENST00000485247 ADAM7Q9H2U9 754 aa6.23□□□□□ -1.41
PTPN4-210ENST00000485247 BOLA2Q9H3K6 86 aa6.23□□□□□ -1.41
PTPN4-210ENST00000485247 GSX1Q9H4S2 264 aaPredicted RBP6.23□□□□□ -1.41
PTPN4-210ENST00000485247 ZNF287Q9HBT7 754 aa6.23□□□□□ -1.41
PTPN4-210ENST00000485247 FAM105AQ9NUU6 356 aa6.23□□□□□ -1.41
PTPN4-210ENST00000485247 SETD4Q9NVD3 440 aa6.23□□□□□ -1.41
PTPN4-210ENST00000485247 PAG1Q9NWQ8 432 aa6.23□□□□□ -1.41
PTPN4-210ENST00000485247 TMEM260Q9NX78 707 aa6.23□□□□□ -1.41
PTPN4-210ENST00000485247 DBR1Q9UK59 544 aaKnown RBP6.23□□□□□ -1.41
PTPN4-210ENST00000485247 USP18Q9UMW8 372 aa6.23□□□□□ -1.41
PTPN4-210ENST00000485247 EXOC6BQ9Y2D4 811 aa6.23□□□□□ -1.41
PTPN4-210ENST00000485247 SUPT16HQ9Y5B9 1047 aaKnown RBP6.23□□□□□ -1.41
PTPN4-210ENST00000485247 FRMPD2Q68DX3 1309 aaPredicted RBP6.23□□□□□ -1.41
PTPN4-210ENST00000485247 FAM208BQ5VWN6 2430 aa6.23□□□□□ -1.41
PTPN4-210ENST00000485247 PLXNA4Q9HCM2 1894 aa6.22□□□□□ -1.41
PTPN4-210ENST00000485247 HIDE1A8MVS5 230 aa6.22□□□□□ -1.41
PTPN4-210ENST00000485247 NMT2O60551 498 aa6.22□□□□□ -1.41
PTPN4-210ENST00000485247 KINO60870 393 aaKnown RBP6.22□□□□□ -1.41
PTPN4-210ENST00000485247 FGF18O76093 207 aa6.22□□□□□ -1.41
PTPN4-210ENST00000485247 DCNP07585 359 aaKnown RBP6.22□□□□□ -1.41
PTPN4-210ENST00000485247 PDIA4P13667 645 aaKnown RBP6.22□□□□□ -1.41
PTPN4-210ENST00000485247 TRIM27P14373 513 aa6.22□□□□□ -1.41
PTPN4-210ENST00000485247 HOXC8P31273 242 aa6.22□□□□□ -1.41
PTPN4-210ENST00000485247 TDO2P48775 406 aa6.22□□□□□ -1.41
PTPN4-210ENST00000485247 GATMP50440 423 aa6.22□□□□□ -1.41
PTPN4-210ENST00000485247 UBE3AQ05086 875 aa6.22□□□□□ -1.41
PTPN4-210ENST00000485247 ITIH3Q06033 890 aa6.22□□□□□ -1.41
PTPN4-210ENST00000485247 KCNA1Q09470 495 aa6.22□□□□□ -1.41
PTPN4-210ENST00000485247 AP3B2Q13367 1082 aa6.22□□□□□ -1.41
PTPN4-210ENST00000485247 TDGQ13569 410 aa6.22□□□□□ -1.41
PTPN4-210ENST00000485247 LPIN1Q14693 890 aa6.22□□□□□ -1.41
PTPN4-210ENST00000485247 NFKBIBQ15653 356 aa6.22□□□□□ -1.41
PTPN4-210ENST00000485247 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.22□□□□□ -1.41
PTPN4-210ENST00000485247 SYDE2Q5VT97 1194 aa6.22□□□□□ -1.41
PTPN4-210ENST00000485247 DTHD1Q6ZMT9 781 aa6.22□□□□□ -1.41
PTPN4-210ENST00000485247 THNSL1Q8IYQ7 743 aa6.22□□□□□ -1.41
PTPN4-210ENST00000485247 RASGRP4Q8TDF6 673 aa6.22□□□□□ -1.41
PTPN4-210ENST00000485247 LINC01599Q8WXQ3 324 aa6.22□□□□□ -1.41
PTPN4-210ENST00000485247 TBC1D5Q92609 795 aa6.22□□□□□ -1.41
PTPN4-210ENST00000485247 GATA6Q92908 595 aa6.22□□□□□ -1.41
PTPN4-210ENST00000485247 SPATA33Q96N06 139 aa6.22□□□□□ -1.41
PTPN4-210ENST00000485247 TAAR1Q96RJ0 339 aa6.22□□□□□ -1.41
PTPN4-210ENST00000485247 CCDC86Q9H6F5 360 aaKnown RBP6.22□□□□□ -1.41
PTPN4-210ENST00000485247 ACSS3Q9H6R3 686 aa6.22□□□□□ -1.41
PTPN4-210ENST00000485247 EHMT1Q9H9B1 1298 aa6.22□□□□□ -1.41
PTPN4-210ENST00000485247 CYP26B1Q9NR63 512 aa6.22□□□□□ -1.41
PTPN4-210ENST00000485247 AP4E1Q9UPM8 1137 aa6.22□□□□□ -1.41
PTPN4-210ENST00000485247 PCDHB12Q9Y5F1 795 aa6.22□□□□□ -1.41
PTPN4-210ENST00000485247 KIAA1671Q9BY89 1806 aa6.22□□□□□ -1.41
PTPN4-210ENST00000485247 TTC3P53804 2025 aa6.21□□□□□ -1.41
PTPN4-210ENST00000485247 PLIN4Q96Q06 1357 aa6.21□□□□□ -1.41
PTPN4-210ENST00000485247 GPR179Q6PRD1 2367 aa6.21□□□□□ -1.42
PTPN4-210ENST00000485247 NARSO43776 548 aaKnown RBP6.21□□□□□ -1.42
PTPN4-210ENST00000485247 ZNF862O60290 1169 aa6.21□□□□□ -1.42
PTPN4-210ENST00000485247 EIF3JO75822 258 aaKnown RBP6.21□□□□□ -1.42
PTPN4-210ENST00000485247 GGPS1O95749 300 aa6.21□□□□□ -1.42
PTPN4-210ENST00000485247 EOMESO95936 686 aa6.21□□□□□ -1.42
PTPN4-210ENST00000485247 APPP05067 770 aa6.21□□□□□ -1.42
PTPN4-210ENST00000485247 IFIT2P09913 472 aaKnown RBP6.21□□□□□ -1.42
PTPN4-210ENST00000485247 GNAT1P11488 350 aa6.21□□□□□ -1.42
PTPN4-210ENST00000485247 RAB6AP20340 208 aa6.21□□□□□ -1.42
PTPN4-210ENST00000485247 MTHFRP42898 656 aa6.21□□□□□ -1.42
PTPN4-210ENST00000485247 PLCB3Q01970 1234 aa6.21□□□□□ -1.42
PTPN4-210ENST00000485247 USH1GQ495M9 461 aa6.21□□□□□ -1.42
PTPN4-210ENST00000485247 HP1BP3Q5SSJ5 553 aaPredicted RBP6.21□□□□□ -1.42
PTPN4-210ENST00000485247 CELF3Q5SZQ8 465 aaKnown RBP6.21□□□□□ -1.42
PTPN4-210ENST00000485247 RARS2Q5T160 578 aaKnown RBP6.21□□□□□ -1.42
PTPN4-210ENST00000485247 GIMAP6Q6P9H5 292 aa6.21□□□□□ -1.42
PTPN4-210ENST00000485247 PAOXQ6QHF9 649 aa6.21□□□□□ -1.42
PTPN4-210ENST00000485247 NXPE4Q6UWF7 544 aa6.21□□□□□ -1.42
PTPN4-210ENST00000485247 BTNL9Q6UXG8 535 aa6.21□□□□□ -1.42
PTPN4-210ENST00000485247 DYMQ7RTS9 669 aa6.21□□□□□ -1.42
PTPN4-210ENST00000485247 RTN4RL1Q86UN2 441 aaPredicted RBP6.21□□□□□ -1.42
PTPN4-210ENST00000485247 DTX1Q86Y01 620 aa6.21□□□□□ -1.42
PTPN4-210ENST00000485247 ERC1Q8IUD2 1116 aa6.21□□□□□ -1.42
PTPN4-210ENST00000485247 NPAS4Q8IUM7 802 aa6.21□□□□□ -1.42
PTPN4-210ENST00000485247 C1orf210Q8IVY1 113 aa6.21□□□□□ -1.42
PTPN4-210ENST00000485247 C12orf76Q8N812 135 aaPredicted RBP6.21□□□□□ -1.42
PTPN4-210ENST00000485247 STK35Q8TDR2 534 aa6.21□□□□□ -1.42
PTPN4-210ENST00000485247 NSUN6Q8TEA1 469 aaKnown RBP6.21□□□□□ -1.42
PTPN4-210ENST00000485247 DCAF4Q8WV16 495 aa6.21□□□□□ -1.42
PTPN4-210ENST00000485247 FRAT1Q92837 279 aaPredicted RBP6.21□□□□□ -1.42
PTPN4-210ENST00000485247 CASP10Q92851 521 aa6.21□□□□□ -1.42
PTPN4-210ENST00000485247 RMDN3Q96TC7 470 aa6.21□□□□□ -1.42
PTPN4-210ENST00000485247 TCF25Q9BQ70 676 aa6.21□□□□□ -1.42
PTPN4-210ENST00000485247 SEMA6CQ9H3T2 930 aa6.21□□□□□ -1.42
PTPN4-210ENST00000485247 TBC1D17Q9HA65 648 aa6.21□□□□□ -1.42
PTPN4-210ENST00000485247 KCNK12Q9HB15 430 aa6.21□□□□□ -1.42
PTPN4-210ENST00000485247 EPB41L4AQ9HCS5 686 aaPredicted RBP6.21□□□□□ -1.42
PTPN4-210ENST00000485247 ENTPD7Q9NQZ7 604 aa6.21□□□□□ -1.42
PTPN4-210ENST00000485247 IL17RBQ9NRM6 502 aa6.21□□□□□ -1.42
PTPN4-210ENST00000485247 COL20A1Q9P218 1284 aa6.21□□□□□ -1.42
PTPN4-210ENST00000485247 ANGPTL2Q9UKU9 493 aa6.21□□□□□ -1.42
PTPN4-210ENST00000485247 CA14Q9ULX7 337 aa6.21□□□□□ -1.42
PTPN4-210ENST00000485247 DUSP12Q9UNI6 340 aa6.21□□□□□ -1.42
PTPN4-210ENST00000485247 HCFC2Q9Y5Z7 792 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms