RNA–Protein interactions for RNA: ENST00000471261.2

PPP1R3F-204, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 3

Gene PPP1R3F, Length 503 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-204ENST00000471261 MATR3P43243 847 aaKnown RBP eCLIP13.84□□□□□ -0.19
PPP1R3F-204ENST00000471261 YARSP54577 528 aaKnown RBP13.84□□□□□ -0.19
PPP1R3F-204ENST00000471261 RBM10P98175 930 aaKnown RBP13.84□□□□□ -0.19
PPP1R3F-204ENST00000471261 DSC1Q08554 894 aa13.84□□□□□ -0.19
PPP1R3F-204ENST00000471261 DUSP6Q16828 381 aa13.84□□□□□ -0.19
PPP1R3F-204ENST00000471261 DYMQ7RTS9 669 aa13.84□□□□□ -0.19
PPP1R3F-204ENST00000471261 HAUS6Q7Z4H7 955 aa13.84□□□□□ -0.19
PPP1R3F-204ENST00000471261 MRPL43Q8N983 215 aaKnown RBP13.84□□□□□ -0.19
PPP1R3F-204ENST00000471261 RABGGTAQ92696 567 aa13.84□□□□□ -0.19
PPP1R3F-204ENST00000471261 VN1R3Q9BXE9 311 aa13.84□□□□□ -0.19
PPP1R3F-204ENST00000471261 ZBP1Q9H171 429 aa13.84□□□□□ -0.19
PPP1R3F-204ENST00000471261 CDT1Q9H211 546 aa13.84□□□□□ -0.19
PPP1R3F-204ENST00000471261 CACNG4Q9UBN1 327 aa13.84□□□□□ -0.19
PPP1R3F-204ENST00000471261 CD207Q9UJ71 328 aa13.84□□□□□ -0.19
PPP1R3F-204ENST00000471261 MORC2Q9Y6X9 1032 aaPredicted RBP13.84□□□□□ -0.19
PPP1R3F-204ENST00000471261 ATG2AQ2TAZ0 1938 aa13.84□□□□□ -0.19
PPP1R3F-204ENST00000471261 FSD2A1L4K1 749 aa13.83□□□□□ -0.2
PPP1R3F-204ENST00000471261 CASTOR2A6NHX0 329 aa13.83□□□□□ -0.2
PPP1R3F-204ENST00000471261 F8W810 466 aa13.83□□□□□ -0.2
PPP1R3F-204ENST00000471261 C2CD2LO14523 706 aa13.83□□□□□ -0.2
PPP1R3F-204ENST00000471261 TRAK2O60296 914 aa13.83□□□□□ -0.2
PPP1R3F-204ENST00000471261 PPP6R2O75170 966 aa13.83□□□□□ -0.2
PPP1R3F-204ENST00000471261 GLP2RO95838 553 aa13.83□□□□□ -0.2
PPP1R3F-204ENST00000471261 THP07101 528 aa13.83□□□□□ -0.2
PPP1R3F-204ENST00000471261 SRGAP2BP0DMP2 458 aa13.83□□□□□ -0.2
PPP1R3F-204ENST00000471261 IL9P15248 144 aa13.83□□□□□ -0.2
PPP1R3F-204ENST00000471261 NCKAP1LP55160 1127 aa13.83□□□□□ -0.2
PPP1R3F-204ENST00000471261 PUS10Q3MIT2 529 aaKnown RBP13.83□□□□□ -0.2
PPP1R3F-204ENST00000471261 GLRA4Q5JXX5 417 aa13.83□□□□□ -0.2
PPP1R3F-204ENST00000471261 MPZL3Q6UWV2 235 aa13.83□□□□□ -0.2
PPP1R3F-204ENST00000471261 SV2BQ7L1I2 683 aa13.83□□□□□ -0.2
PPP1R3F-204ENST00000471261 FAM178BQ8IXR5 827 aa13.83□□□□□ -0.2
PPP1R3F-204ENST00000471261 CEP120Q8N960 986 aa13.83□□□□□ -0.2
PPP1R3F-204ENST00000471261 KCNG4Q8TDN1 519 aa13.83□□□□□ -0.2
PPP1R3F-204ENST00000471261 DDX12PQ92771 950 aa13.83□□□□□ -0.2
PPP1R3F-204ENST00000471261 CCDC94Q9BW85 323 aaPredicted RBP13.83□□□□□ -0.2
PPP1R3F-204ENST00000471261 COLEC11Q9BWP8 271 aa13.83□□□□□ -0.2
PPP1R3F-204ENST00000471261 CXCL16Q9H2A7 254 aa13.83□□□□□ -0.2
PPP1R3F-204ENST00000471261 PTPRHQ9HD43 1115 aa13.83□□□□□ -0.2
PPP1R3F-204ENST00000471261 MARCH5Q9NX47 278 aa13.83□□□□□ -0.2
PPP1R3F-204ENST00000471261 STK39Q9UEW8 545 aa13.83□□□□□ -0.2
PPP1R3F-204ENST00000471261 FAM50BQ9Y247 325 aa13.83□□□□□ -0.2
PPP1R3F-204ENST00000471261 ZMYM2Q9UBW7 1377 aa13.83□□□□□ -0.2
PPP1R3F-204ENST00000471261 A0A087X0B3 334 aa13.82□□□□□ -0.2
PPP1R3F-204ENST00000471261 GRXCR2A6NFK2 248 aa13.82□□□□□ -0.2
PPP1R3F-204ENST00000471261 MYMKA6NI61 221 aa13.82□□□□□ -0.2
PPP1R3F-204ENST00000471261 PTGESO14684 152 aa13.82□□□□□ -0.2
PPP1R3F-204ENST00000471261 HNRNPDLO14979 420 aaKnown RBP13.82□□□□□ -0.2
PPP1R3F-204ENST00000471261 CUTAO60888 179 aa13.82□□□□□ -0.2
PPP1R3F-204ENST00000471261 TOM1L1O75674 476 aa13.82□□□□□ -0.2
PPP1R3F-204ENST00000471261 CTSAP10619 480 aa13.82□□□□□ -0.2
PPP1R3F-204ENST00000471261 MCF2P10911 925 aa13.82□□□□□ -0.2
PPP1R3F-204ENST00000471261 NMT1P30419 496 aaKnown RBP13.82□□□□□ -0.2
PPP1R3F-204ENST00000471261 ME1P48163 572 aa13.82□□□□□ -0.2
PPP1R3F-204ENST00000471261 LIG4P49917 911 aa13.82□□□□□ -0.2
PPP1R3F-204ENST00000471261 ZNF131P52739 623 aa13.82□□□□□ -0.2
PPP1R3F-204ENST00000471261 DNM1Q05193 864 aaKnown RBP13.82□□□□□ -0.2
PPP1R3F-204ENST00000471261 TUSC3Q13454 348 aa13.82□□□□□ -0.2
PPP1R3F-204ENST00000471261 BECN1Q14457 450 aa13.82□□□□□ -0.2
PPP1R3F-204ENST00000471261 NOLC1Q14978 699 aaKnown RBP eCLIP13.82□□□□□ -0.2
PPP1R3F-204ENST00000471261 VN1R2Q8NFZ6 395 aa13.82□□□□□ -0.2
PPP1R3F-204ENST00000471261 HASPINQ8TF76 798 aa13.82□□□□□ -0.2
PPP1R3F-204ENST00000471261 ZBTB45Q96K62 511 aaPredicted RBP13.82□□□□□ -0.2
PPP1R3F-204ENST00000471261 TOPORSQ9NS56 1045 aaPredicted RBP13.82□□□□□ -0.2
PPP1R3F-204ENST00000471261 CLEC1BQ9P126 229 aa13.82□□□□□ -0.2
PPP1R3F-204ENST00000471261 CFAP45Q9UL16 551 aa13.82□□□□□ -0.2
PPP1R3F-204ENST00000471261 TBX20Q9UMR3 447 aa13.82□□□□□ -0.2
PPP1R3F-204ENST00000471261 C5orf42Q9H799 3197 aa13.81□□□□□ -0.2
PPP1R3F-204ENST00000471261 TNFRSF10AO00220 468 aa13.81□□□□□ -0.2
PPP1R3F-204ENST00000471261 CLDN3O15551 220 aa13.81□□□□□ -0.2
PPP1R3F-204ENST00000471261 CLASP2O75122 1294 aaKnown RBP13.81□□□□□ -0.2
PPP1R3F-204ENST00000471261 TADA2AO75478 443 aa13.81□□□□□ -0.2
PPP1R3F-204ENST00000471261 SOD2P04179 222 aa13.81□□□□□ -0.2
PPP1R3F-204ENST00000471261 URODP06132 367 aa13.81□□□□□ -0.2
PPP1R3F-204ENST00000471261 IDEP14735 1019 aa13.81□□□□□ -0.2
PPP1R3F-204ENST00000471261 PROZP22891 400 aa13.81□□□□□ -0.2
PPP1R3F-204ENST00000471261 GRM5P41594 1212 aa13.81□□□□□ -0.2
PPP1R3F-204ENST00000471261 HSP90AA2PQ14568 343 aaPredicted RBP13.81□□□□□ -0.2
PPP1R3F-204ENST00000471261 PTPN14Q15678 1187 aa13.81□□□□□ -0.2
PPP1R3F-204ENST00000471261 SEZ6Q53EL9 994 aa13.81□□□□□ -0.2
PPP1R3F-204ENST00000471261 ATL3Q6DD88 541 aa13.81□□□□□ -0.2
PPP1R3F-204ENST00000471261 KIAA1841Q6NSI8 718 aa13.81□□□□□ -0.2
PPP1R3F-204ENST00000471261 TAS1R1Q7RTX1 841 aa13.81□□□□□ -0.2
PPP1R3F-204ENST00000471261 SFR1Q86XK3 245 aa13.81□□□□□ -0.2
PPP1R3F-204ENST00000471261 B3GALT6Q96L58 329 aa13.81□□□□□ -0.2
PPP1R3F-204ENST00000471261 ACAP3Q96P50 834 aa13.81□□□□□ -0.2
PPP1R3F-204ENST00000471261 PAAF1Q9BRP4 392 aa13.81□□□□□ -0.2
PPP1R3F-204ENST00000471261 APOL5Q9BWW9 433 aa13.81□□□□□ -0.2
PPP1R3F-204ENST00000471261 MRPL17Q9NRX2 175 aaKnown RBP13.81□□□□□ -0.2
PPP1R3F-204ENST00000471261 TBC1D7Q9P0N9 293 aa13.81□□□□□ -0.2
PPP1R3F-204ENST00000471261 ADAM28Q9UKQ2 775 aa13.81□□□□□ -0.2
PPP1R3F-204ENST00000471261 TCF20Q9UGU0 1960 aaKnown RBP13.81□□□□□ -0.2
PPP1R3F-204ENST00000471261 ABLIM1O14639 778 aa13.8□□□□□ -0.2
PPP1R3F-204ENST00000471261 KLRC2P26717 231 aa13.8□□□□□ -0.2
PPP1R3F-204ENST00000471261 SSTR3P32745 418 aaPredicted RBP13.8□□□□□ -0.2
PPP1R3F-204ENST00000471261 SMAD4Q13485 552 aaKnown RBP13.8□□□□□ -0.2
PPP1R3F-204ENST00000471261 ZC2HC1CQ53FD0 456 aaPredicted RBP13.8□□□□□ -0.2
PPP1R3F-204ENST00000471261 FUT10Q6P4F1 479 aa13.8□□□□□ -0.2
PPP1R3F-204ENST00000471261 SHC4Q6S5L8 630 aa13.8□□□□□ -0.2
PPP1R3F-204ENST00000471261 ZPBP2Q6X784 338 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms