RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 EMC2Q15006 297 aa11.31□□□□□ -0.6
TOP3B-210ENST00000444502 HIBCHQ6NVY1 386 aaPredicted RBP11.31□□□□□ -0.6
TOP3B-210ENST00000444502 EMBQ6PCB8 327 aa11.31□□□□□ -0.6
TOP3B-210ENST00000444502 KCNV1Q6PIU1 500 aa11.31□□□□□ -0.6
TOP3B-210ENST00000444502 CAPN12Q6ZSI9 719 aa11.31□□□□□ -0.6
TOP3B-210ENST00000444502 DDX42Q86XP3 938 aaKnown RBP eCLIP11.31□□□□□ -0.6
TOP3B-210ENST00000444502 MKL1Q969V6 931 aa11.31□□□□□ -0.6
TOP3B-210ENST00000444502 SMARCAD1Q9H4L7 1026 aa11.31□□□□□ -0.6
TOP3B-210ENST00000444502 SUDS3Q9H7L9 328 aaPredicted RBP11.31□□□□□ -0.6
TOP3B-210ENST00000444502 AGPAT3Q9NRZ7 376 aa11.31□□□□□ -0.6
TOP3B-210ENST00000444502 USP20Q9Y2K6 914 aa11.31□□□□□ -0.6
TOP3B-210ENST00000444502 CYP26A1O43174 497 aa11.3□□□□□ -0.6
TOP3B-210ENST00000444502 SLITRK3O94933 977 aa11.3□□□□□ -0.6
TOP3B-210ENST00000444502 POLR2BP30876 1174 aaKnown RBP11.3□□□□□ -0.6
TOP3B-210ENST00000444502 MAPK4P31152 587 aa11.3□□□□□ -0.6
TOP3B-210ENST00000444502 ARL1P40616 181 aaPredicted RBP11.3□□□□□ -0.6
TOP3B-210ENST00000444502 ALCAMQ13740 583 aa11.3□□□□□ -0.6
TOP3B-210ENST00000444502 MEA1Q16626 185 aa11.3□□□□□ -0.6
TOP3B-210ENST00000444502 LY6KQ17RY6 165 aa11.3□□□□□ -0.6
TOP3B-210ENST00000444502 FKBP1CQ5VVH2 108 aa11.3□□□□□ -0.6
TOP3B-210ENST00000444502 PAPD7Q5XG87 772 aaKnown RBP11.3□□□□□ -0.6
TOP3B-210ENST00000444502 MGARPQ8TDB4 240 aa11.3□□□□□ -0.6
TOP3B-210ENST00000444502 HDAC7Q8WUI4 952 aa11.3□□□□□ -0.6
TOP3B-210ENST00000444502 ZBED2Q9BTP6 218 aa11.3□□□□□ -0.6
TOP3B-210ENST00000444502 MRPL4Q9BYD3 311 aaKnown RBP11.3□□□□□ -0.6
TOP3B-210ENST00000444502 A1CFQ9NQ94 594 aaKnown RBP11.3□□□□□ -0.6
TOP3B-210ENST00000444502 HSPBP1Q9NZL4 362 aa11.3□□□□□ -0.6
TOP3B-210ENST00000444502 SIPA1L3O60292 1781 aaPredicted RBP11.3□□□□□ -0.6
TOP3B-210ENST00000444502 PDE2AO00408 941 aaPredicted RBP11.3□□□□□ -0.6
TOP3B-210ENST00000444502 PRKCBP05771 671 aa11.3□□□□□ -0.6
TOP3B-210ENST00000444502 KCNMA1Q12791 1236 aa11.3□□□□□ -0.6
TOP3B-210ENST00000444502 DENND2CQ68D51 928 aa11.3□□□□□ -0.6
TOP3B-210ENST00000444502 MOXD1Q6UVY6 613 aa11.3□□□□□ -0.6
TOP3B-210ENST00000444502 ZNF571Q7Z3V5 609 aaPredicted RBP11.3□□□□□ -0.6
TOP3B-210ENST00000444502 PPP1R12CQ9BZL4 782 aa11.3□□□□□ -0.6
TOP3B-210ENST00000444502 VPS33BQ9H267 617 aa11.3□□□□□ -0.6
TOP3B-210ENST00000444502 TOPORSQ9NS56 1045 aaPredicted RBP11.3□□□□□ -0.6
TOP3B-210ENST00000444502 NAGPAQ9UK23 515 aa11.3□□□□□ -0.6
TOP3B-210ENST00000444502 NOC2LQ9Y3T9 749 aaKnown RBP11.3□□□□□ -0.6
TOP3B-210ENST00000444502 NUP188Q5SRE5 1749 aa11.3□□□□□ -0.6
TOP3B-210ENST00000444502 MEFVO15553 781 aaPredicted RBP11.3□□□□□ -0.6
TOP3B-210ENST00000444502 SLC8A1P32418 973 aa11.3□□□□□ -0.6
TOP3B-210ENST00000444502 SLCO1A2P46721 670 aa11.3□□□□□ -0.6
TOP3B-210ENST00000444502 SLC12A3P55017 1021 aa11.3□□□□□ -0.6
TOP3B-210ENST00000444502 BPIFB4P59827 614 aa11.3□□□□□ -0.6
TOP3B-210ENST00000444502 TNFAIP2Q03169 654 aa11.3□□□□□ -0.6
TOP3B-210ENST00000444502 NAB2Q15742 525 aa11.3□□□□□ -0.6
TOP3B-210ENST00000444502 CDO1Q16878 200 aa11.3□□□□□ -0.6
TOP3B-210ENST00000444502 ZNF699Q32M78 642 aa11.3□□□□□ -0.6
TOP3B-210ENST00000444502 Q4G0T1 1027 aa11.3□□□□□ -0.6
TOP3B-210ENST00000444502 EFCAB12Q6NXP0 572 aa11.3□□□□□ -0.6
TOP3B-210ENST00000444502 SH2D3CQ8N5H7 860 aa11.3□□□□□ -0.6
TOP3B-210ENST00000444502 CBWD1Q9BRT8 395 aa11.3□□□□□ -0.6
TOP3B-210ENST00000444502 GCOM2Q9BZD3 368 aaPredicted RBP11.3□□□□□ -0.6
TOP3B-210ENST00000444502 KCNMB3Q9NPA1 279 aa11.3□□□□□ -0.6
TOP3B-210ENST00000444502 LPXNO60711 386 aa11.29□□□□□ -0.6
TOP3B-210ENST00000444502 CYP2C9P11712 490 aa11.29□□□□□ -0.6
TOP3B-210ENST00000444502 CIITAP33076 1130 aa11.29□□□□□ -0.6
TOP3B-210ENST00000444502 KRT81Q14533 505 aa11.29□□□□□ -0.6
TOP3B-210ENST00000444502 EPC2Q52LR7 807 aa11.29□□□□□ -0.6
TOP3B-210ENST00000444502 OR6B2Q6IFH4 312 aa11.29□□□□□ -0.6
TOP3B-210ENST00000444502 OTOP1Q7RTM1 612 aa11.29□□□□□ -0.6
TOP3B-210ENST00000444502 PARP9Q8IXQ6 854 aa11.29□□□□□ -0.6
TOP3B-210ENST00000444502 CCDC77Q9BR77 488 aa11.29□□□□□ -0.6
TOP3B-210ENST00000444502 PXMP2Q9NR77 195 aa11.29□□□□□ -0.6
TOP3B-210ENST00000444502 HAUS2Q9NVX0 235 aa11.29□□□□□ -0.6
TOP3B-210ENST00000444502 APEX2Q9UBZ4 518 aa11.29□□□□□ -0.6
TOP3B-210ENST00000444502 DOT1LQ8TEK3 1739 aa11.29□□□□□ -0.6
TOP3B-210ENST00000444502 NKRFO15226 690 aaKnown RBP eCLIP11.29□□□□□ -0.6
TOP3B-210ENST00000444502 SART1O43290 800 aaKnown RBP11.29□□□□□ -0.6
TOP3B-210ENST00000444502 UPP2O95045 317 aa11.29□□□□□ -0.6
TOP3B-210ENST00000444502 SETSIPP0DME0 302 aa11.29□□□□□ -0.6
TOP3B-210ENST00000444502 NLRP11P59045 1033 aaKnown RBP11.29□□□□□ -0.6
TOP3B-210ENST00000444502 FKBP1AP62942 108 aaKnown RBP11.29□□□□□ -0.6
TOP3B-210ENST00000444502 MTMR3Q13615 1198 aa11.29□□□□□ -0.6
TOP3B-210ENST00000444502 USP50Q70EL3 339 aaPredicted RBP11.29□□□□□ -0.6
TOP3B-210ENST00000444502 PLEKHH3Q7Z736 793 aa11.29□□□□□ -0.6
TOP3B-210ENST00000444502 SLC30A5Q8TAD4 765 aa11.29□□□□□ -0.6
TOP3B-210ENST00000444502 SLC35G2Q8TBE7 412 aa11.29□□□□□ -0.6
TOP3B-210ENST00000444502 AFG1LQ8WV93 481 aa11.29□□□□□ -0.6
TOP3B-210ENST00000444502 STK33Q9BYT3 514 aa11.29□□□□□ -0.6
TOP3B-210ENST00000444502 BCAS3Q9H6U6 928 aa11.29□□□□□ -0.6
TOP3B-210ENST00000444502 PPP2R3BQ9Y5P8 575 aa11.29□□□□□ -0.6
TOP3B-210ENST00000444502 TISP43B9A030 160 aa11.29□□□□□ -0.6
TOP3B-210ENST00000444502 ATMINO43313 823 aaPredicted RBP11.29□□□□□ -0.6
TOP3B-210ENST00000444502 LDHAP00338 332 aaKnown RBP11.29□□□□□ -0.6
TOP3B-210ENST00000444502 DYNLT1P63172 113 aa11.29□□□□□ -0.6
TOP3B-210ENST00000444502 CASC4Q6P4E1 433 aa11.29□□□□□ -0.6
TOP3B-210ENST00000444502 ERAP1Q9NZ08 941 aa11.29□□□□□ -0.6
TOP3B-210ENST00000444502 POLIQ9UNA4 740 aa11.29□□□□□ -0.6
TOP3B-210ENST00000444502 PLAAQ9Y263 795 aa11.29□□□□□ -0.6
TOP3B-210ENST00000444502 DUOX1Q9NRD9 1551 aa11.29□□□□□ -0.6
TOP3B-210ENST00000444502 ZSCAN5CA6NGD5 496 aaPredicted RBP11.28□□□□□ -0.6
TOP3B-210ENST00000444502 FOXN3O00409 490 aaPredicted RBP11.28□□□□□ -0.6
TOP3B-210ENST00000444502 RGS16O15492 202 aaPredicted RBP11.28□□□□□ -0.6
TOP3B-210ENST00000444502 PCK1P35558 622 aa11.28□□□□□ -0.6
TOP3B-210ENST00000444502 ADCY8P40145 1251 aa11.28□□□□□ -0.6
TOP3B-210ENST00000444502 MXRA7P84157 204 aa11.28□□□□□ -0.6
TOP3B-210ENST00000444502 SREBF2Q12772 1141 aa11.28□□□□□ -0.6
TOP3B-210ENST00000444502 WDR72Q3MJ13 1102 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms