RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 NPTXRO95502 500 aa22.93■■□□□ 1.26
VPS13B-204ENST00000441350 KRT13P13646 458 aa22.93■■□□□ 1.26
VPS13B-204ENST00000441350 POU5F1Q01860 360 aaKnown RBP22.93■■□□□ 1.26
VPS13B-204ENST00000441350 DSC3Q14574 896 aa22.93■■□□□ 1.26
VPS13B-204ENST00000441350 KYAT1Q16773 422 aa22.93■■□□□ 1.26
VPS13B-204ENST00000441350 FILIP1LQ4L180 1135 aa22.93■■□□□ 1.26
VPS13B-204ENST00000441350 TMC2Q8TDI7 906 aa22.93■■□□□ 1.26
VPS13B-204ENST00000441350 MRFAP1L1Q96HT8 127 aa22.93■■□□□ 1.26
VPS13B-204ENST00000441350 NDST4Q9H3R1 872 aa22.93■■□□□ 1.26
VPS13B-204ENST00000441350 TMEM39AQ9NV64 488 aa22.93■■□□□ 1.26
VPS13B-204ENST00000441350 NBNO60934 754 aa22.93■■□□□ 1.26
VPS13B-204ENST00000441350 TPM2P07951 284 aa22.93■■□□□ 1.26
VPS13B-204ENST00000441350 VAMP7P51809 220 aa22.93■■□□□ 1.26
VPS13B-204ENST00000441350 C1orf220Q5T0J3 134 aa22.93■■□□□ 1.26
VPS13B-204ENST00000441350 BRSK2Q8IWQ3 736 aa22.93■■□□□ 1.26
VPS13B-204ENST00000441350 PARD3BQ8TEW8 1205 aa22.93■■□□□ 1.26
VPS13B-204ENST00000441350 WNT8AQ9H1J5 351 aa22.93■■□□□ 1.26
VPS13B-204ENST00000441350 RBAKQ9NYW8 714 aaPredicted RBP22.93■■□□□ 1.26
VPS13B-204ENST00000441350 TEX33O43247 280 aa22.92■■□□□ 1.26
VPS13B-204ENST00000441350 CLTAP09496 248 aa22.92■■□□□ 1.26
VPS13B-204ENST00000441350 STAG3L1P0CL83 205 aa22.92■■□□□ 1.26
VPS13B-204ENST00000441350 GRM5P41594 1212 aa22.92■■□□□ 1.26
VPS13B-204ENST00000441350 DLG4P78352 724 aa22.92■■□□□ 1.26
VPS13B-204ENST00000441350 PSMD6Q15008 389 aa22.92■■□□□ 1.26
VPS13B-204ENST00000441350 ENOX2Q16206 610 aaKnown RBP22.92■■□□□ 1.26
VPS13B-204ENST00000441350 TMEM192Q8IY95 271 aa22.92■■□□□ 1.26
VPS13B-204ENST00000441350 PARNO95453 639 aaKnown RBP22.91■■□□□ 1.26
VPS13B-204ENST00000441350 WNT7BP56706 349 aa22.91■■□□□ 1.26
VPS13B-204ENST00000441350 CLDN10P78369 228 aa22.91■■□□□ 1.26
VPS13B-204ENST00000441350 KCNH2Q12809 1159 aa22.91■■□□□ 1.26
VPS13B-204ENST00000441350 DCAF17Q5H9S7 520 aaPredicted RBP22.91■■□□□ 1.26
VPS13B-204ENST00000441350 COL13A1Q5TAT6 717 aaPredicted RBP22.91■■□□□ 1.26
VPS13B-204ENST00000441350 TWF2Q6IBS0 349 aaKnown RBP22.91■■□□□ 1.26
VPS13B-204ENST00000441350 TRAIPQ9BWF2 469 aa22.91■■□□□ 1.26
VPS13B-204ENST00000441350 IFIH1Q9BYX4 1025 aaKnown RBP22.91■■□□□ 1.26
VPS13B-204ENST00000441350 PPP1R12CQ9BZL4 782 aa22.91■■□□□ 1.26
VPS13B-204ENST00000441350 KIAA0355O15063 1070 aa22.9■■□□□ 1.26
VPS13B-204ENST00000441350 MGEA5O60502 916 aa22.9■■□□□ 1.26
VPS13B-204ENST00000441350 AFPP02771 609 aaKnown RBP22.9■■□□□ 1.26
VPS13B-204ENST00000441350 TPM3P06753 285 aa22.9■■□□□ 1.26
VPS13B-204ENST00000441350 TRIM49P0CI25 452 aa22.9■■□□□ 1.26
VPS13B-204ENST00000441350 TRIM49CP0CI26 452 aa22.9■■□□□ 1.26
VPS13B-204ENST00000441350 ZSCAN20P17040 1043 aaPredicted RBP22.9■■□□□ 1.26
VPS13B-204ENST00000441350 CYP2C18P33260 490 aa22.9■■□□□ 1.26
VPS13B-204ENST00000441350 OSTNP61366 133 aa22.9■■□□□ 1.26
VPS13B-204ENST00000441350 TCERG1LQ5VWI1 586 aa22.9■■□□□ 1.26
VPS13B-204ENST00000441350 CCDC127Q96BQ5 260 aa22.9■■□□□ 1.26
VPS13B-204ENST00000441350 MEFVO15553 781 aaPredicted RBP22.9■■□□□ 1.26
VPS13B-204ENST00000441350 UBXN1Q04323 297 aa22.9■■□□□ 1.26
VPS13B-204ENST00000441350 PLEKHG4Q58EX7 1191 aa22.9■■□□□ 1.26
VPS13B-204ENST00000441350 FAM43BQ6ZT52 329 aaPredicted RBP22.9■■□□□ 1.26
VPS13B-204ENST00000441350 USP37Q86T82 979 aa22.9■■□□□ 1.26
VPS13B-204ENST00000441350 SMG8Q8ND04 991 aaKnown RBP22.9■■□□□ 1.26
VPS13B-204ENST00000441350 TRIM6Q9C030 488 aaPredicted RBP22.9■■□□□ 1.26
VPS13B-204ENST00000441350 RPF1Q9H9Y2 349 aaKnown RBP22.9■■□□□ 1.26
VPS13B-204ENST00000441350 PDE11AQ9HCR9 933 aa22.9■■□□□ 1.26
VPS13B-204ENST00000441350 ANK1P16157 1881 aa22.89■■□□□ 1.26
VPS13B-204ENST00000441350 SCN5AQ14524 2016 aa22.89■■□□□ 1.25
VPS13B-204ENST00000441350 LRRIQ3A6PVS8 624 aaPredicted RBP22.89■■□□□ 1.25
VPS13B-204ENST00000441350 PES1O00541 588 aaKnown RBP22.89■■□□□ 1.25
VPS13B-204ENST00000441350 CXCL10P02778 98 aa22.89■■□□□ 1.25
VPS13B-204ENST00000441350 PBX1P40424 430 aa22.89■■□□□ 1.25
VPS13B-204ENST00000441350 CCL23P55773 120 aa22.89■■□□□ 1.25
VPS13B-204ENST00000441350 ANP32BQ92688 251 aaKnown RBP22.89■■□□□ 1.25
VPS13B-204ENST00000441350 SCLYQ96I15 445 aa22.89■■□□□ 1.25
VPS13B-204ENST00000441350 ACAP3Q96P50 834 aa22.89■■□□□ 1.25
VPS13B-204ENST00000441350 CCDC94Q9BW85 323 aaPredicted RBP22.89■■□□□ 1.25
VPS13B-204ENST00000441350 NXF3Q9H4D5 531 aaKnown RBP22.89■■□□□ 1.25
VPS13B-204ENST00000441350 FAM105AQ9NUU6 356 aa22.89■■□□□ 1.25
VPS13B-204ENST00000441350 IPPQ9Y573 584 aa22.89■■□□□ 1.25
VPS13B-204ENST00000441350 PCDHB2Q9Y5E7 798 aa22.89■■□□□ 1.25
VPS13B-204ENST00000441350 MKI67P46013 3256 aaKnown RBP22.88■■□□□ 1.25
VPS13B-204ENST00000441350 ALPK3Q96L96 1907 aa22.88■■□□□ 1.25
VPS13B-204ENST00000441350 TRIM43BA6NCK2 446 aa22.88■■□□□ 1.25
VPS13B-204ENST00000441350 CXCL8P10145 99 aa22.88■■□□□ 1.25
VPS13B-204ENST00000441350 CDC25BP30305 580 aa22.88■■□□□ 1.25
VPS13B-204ENST00000441350 PPP3CAQ08209 521 aa22.88■■□□□ 1.25
VPS13B-204ENST00000441350 SURF1Q15526 300 aa22.88■■□□□ 1.25
VPS13B-204ENST00000441350 SLC10A6Q3KNW5 377 aa22.88■■□□□ 1.25
VPS13B-204ENST00000441350 TRIM43Q96BQ3 446 aaPredicted RBP22.88■■□□□ 1.25
VPS13B-204ENST00000441350 POP1Q99575 1024 aaKnown RBP22.88■■□□□ 1.25
VPS13B-204ENST00000441350 ADAM2Q99965 735 aa22.88■■□□□ 1.25
VPS13B-204ENST00000441350 SNTG2Q9NY99 539 aa22.88■■□□□ 1.25
VPS13B-204ENST00000441350 HES2Q9Y543 173 aa22.88■■□□□ 1.25
VPS13B-204ENST00000441350 CITO14578 2027 aa22.87■■□□□ 1.25
VPS13B-204ENST00000441350 TTC26A0AVF1 554 aa22.87■■□□□ 1.25
VPS13B-204ENST00000441350 IL18RAPO95256 599 aa22.87■■□□□ 1.25
VPS13B-204ENST00000441350 DLATP10515 647 aaKnown RBP22.87■■□□□ 1.25
VPS13B-204ENST00000441350 GTF2H1P32780 548 aa22.87■■□□□ 1.25
VPS13B-204ENST00000441350 FMO5P49326 533 aa22.87■■□□□ 1.25
VPS13B-204ENST00000441350 FKBP15Q5T1M5 1219 aa22.87■■□□□ 1.25
VPS13B-204ENST00000441350 ABHD8Q96I13 439 aa22.87■■□□□ 1.25
VPS13B-204ENST00000441350 ERGIC2Q96RQ1 377 aa22.87■■□□□ 1.25
VPS13B-204ENST00000441350 FNBP1Q96RU3 617 aa22.87■■□□□ 1.25
VPS13B-204ENST00000441350 TET1Q8NFU7 2136 aa22.87■■□□□ 1.25
VPS13B-204ENST00000441350 STX10O60499 249 aa22.86■■□□□ 1.25
VPS13B-204ENST00000441350 ZNF623O75123 536 aa22.86■■□□□ 1.25
VPS13B-204ENST00000441350 TIMP1P01033 207 aa22.86■■□□□ 1.25
VPS13B-204ENST00000441350 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.86■■□□□ 1.25
VPS13B-204ENST00000441350 MRPL10Q7Z7H8 261 aaKnown RBP22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms