RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 SRGAP2CP0DJJ0 459 aa5.67□□□□□ -1.5
GABPB1-204ENST00000396464 PDCP20941 246 aa5.67□□□□□ -1.5
GABPB1-204ENST00000396464 CD247P20963 164 aa5.67□□□□□ -1.5
GABPB1-204ENST00000396464 HOXC12P31275 282 aa5.67□□□□□ -1.5
GABPB1-204ENST00000396464 BMP8BP34820 402 aa5.67□□□□□ -1.5
GABPB1-204ENST00000396464 TDO2P48775 406 aa5.67□□□□□ -1.5
GABPB1-204ENST00000396464 MAN2A2P49641 1150 aa5.67□□□□□ -1.5
GABPB1-204ENST00000396464 CLNS1AP54105 237 aaKnown RBP5.67□□□□□ -1.5
GABPB1-204ENST00000396464 NAP1L1P55209 391 aaKnown RBP5.67□□□□□ -1.5
GABPB1-204ENST00000396464 KIF23Q02241 960 aaPredicted RBP5.67□□□□□ -1.5
GABPB1-204ENST00000396464 ALDH6A1Q02252 535 aaKnown RBP5.67□□□□□ -1.5
GABPB1-204ENST00000396464 CYP4F3Q08477 520 aa5.67□□□□□ -1.5
GABPB1-204ENST00000396464 ZNF543Q08ER8 600 aa5.67□□□□□ -1.5
GABPB1-204ENST00000396464 PGS1Q32NB8 556 aa5.67□□□□□ -1.5
GABPB1-204ENST00000396464 GJC2Q5T442 439 aaPredicted RBP5.67□□□□□ -1.5
GABPB1-204ENST00000396464 NUGGCQ68CJ6 796 aa5.67□□□□□ -1.5
GABPB1-204ENST00000396464 CWF19L1Q69YN2 538 aaKnown RBP5.67□□□□□ -1.5
GABPB1-204ENST00000396464 RTL10Q7L3V2 364 aa5.67□□□□□ -1.5
GABPB1-204ENST00000396464 FAM129CQ86XR2 697 aa5.67□□□□□ -1.5
GABPB1-204ENST00000396464 TEX11Q8IYF3 940 aa5.67□□□□□ -1.5
GABPB1-204ENST00000396464 ARL6IP6Q8N6S5 226 aa5.67□□□□□ -1.5
GABPB1-204ENST00000396464 SIMC1Q8NDZ2 872 aa5.67□□□□□ -1.5
GABPB1-204ENST00000396464 ORAI2Q96SN7 254 aa5.67□□□□□ -1.5
GABPB1-204ENST00000396464 SORBS1Q9BX66 1292 aaKnown RBP5.67□□□□□ -1.5
GABPB1-204ENST00000396464 MRPL9Q9BYD2 267 aaKnown RBP5.67□□□□□ -1.5
GABPB1-204ENST00000396464 ZNF277Q9NRM2 450 aaPredicted RBP5.67□□□□□ -1.5
GABPB1-204ENST00000396464 OLA1Q9NTK5 396 aaKnown RBP5.67□□□□□ -1.5
GABPB1-204ENST00000396464 IRAK4Q9NWZ3 460 aa5.67□□□□□ -1.5
GABPB1-204ENST00000396464 DNAJC28Q9NX36 388 aa5.67□□□□□ -1.5
GABPB1-204ENST00000396464 KLHL14Q9P2G3 628 aa5.67□□□□□ -1.5
GABPB1-204ENST00000396464 TUBD1Q9UJT1 453 aa5.67□□□□□ -1.5
GABPB1-204ENST00000396464 MINPP1Q9UNW1 487 aa5.67□□□□□ -1.5
GABPB1-204ENST00000396464 SNX13Q9Y5W8 968 aa5.67□□□□□ -1.5
GABPB1-204ENST00000396464 POM121BA6NF01 834 aa5.66□□□□□ -1.5
GABPB1-204ENST00000396464 TRIM64CA6NLI5 447 aa5.66□□□□□ -1.5
GABPB1-204ENST00000396464 DDX3XO00571 662 aaKnown RBP eCLIP5.66□□□□□ -1.54e-11■■■□□ 15.2
GABPB1-204ENST00000396464 ZBED4O75132 1171 aa5.66□□□□□ -1.5
GABPB1-204ENST00000396464 NDUFS2O75306 463 aa5.66□□□□□ -1.5
GABPB1-204ENST00000396464 OSMP13725 252 aa5.66□□□□□ -1.5
GABPB1-204ENST00000396464 TSHRP16473 764 aa5.66□□□□□ -1.5
GABPB1-204ENST00000396464 PFKLP17858 780 aa5.66□□□□□ -1.5
GABPB1-204ENST00000396464 MUTP22033 750 aa5.66□□□□□ -1.5
GABPB1-204ENST00000396464 ECI1P42126 302 aa5.66□□□□□ -1.5
GABPB1-204ENST00000396464 DRG2P55039 364 aaKnown RBP5.66□□□□□ -1.5
GABPB1-204ENST00000396464 SRSF2Q01130 221 aaKnown RBP5.66□□□□□ -1.5
GABPB1-204ENST00000396464 CFAP58Q5T655 872 aa5.66□□□□□ -1.5
GABPB1-204ENST00000396464 IQCEQ6IPM2 695 aa5.66□□□□□ -1.5
GABPB1-204ENST00000396464 OVCH1Q7RTY7 1134 aa5.66□□□□□ -1.5
GABPB1-204ENST00000396464 MILR1Q7Z6M3 343 aa5.66□□□□□ -1.5
GABPB1-204ENST00000396464 BRSK2Q8IWQ3 736 aa5.66□□□□□ -1.5
GABPB1-204ENST00000396464 PRR18Q8N4B5 295 aa5.66□□□□□ -1.5
GABPB1-204ENST00000396464 ATG16L2Q8NAA4 619 aa5.66□□□□□ -1.5
GABPB1-204ENST00000396464 PCDH19Q8TAB3 1148 aa5.66□□□□□ -1.5
GABPB1-204ENST00000396464 BORCS6Q96GS4 357 aa5.66□□□□□ -1.5
GABPB1-204ENST00000396464 CCDC140Q96MF4 163 aa5.66□□□□□ -1.5
GABPB1-204ENST00000396464 MPHOSPH8Q99549 860 aa5.66□□□□□ -1.5
GABPB1-204ENST00000396464 FAM167BQ9BTA0 163 aa5.66□□□□□ -1.5
GABPB1-204ENST00000396464 PHF20Q9BVI0 1012 aa5.66□□□□□ -1.5
GABPB1-204ENST00000396464 KRTAP9-3Q9BYQ3 159 aa5.66□□□□□ -1.5
GABPB1-204ENST00000396464 ERVK13-1Q9NX77 482 aa5.66□□□□□ -1.5
GABPB1-204ENST00000396464 LRFN1Q9P244 771 aa5.66□□□□□ -1.5
GABPB1-204ENST00000396464 SLC13A4Q9UKG4 626 aa5.66□□□□□ -1.5
GABPB1-204ENST00000396464 NOC2LQ9Y3T9 749 aaKnown RBP5.66□□□□□ -1.5
GABPB1-204ENST00000396464 GPR45Q9Y5Y3 372 aa5.66□□□□□ -1.5
GABPB1-204ENST00000396464 A0A087X0M5 115 aa5.65□□□□□ -1.5
GABPB1-204ENST00000396464 A0A1B0GX30 115 aa5.65□□□□□ -1.5
GABPB1-204ENST00000396464 LCHNA4D1U4 455 aa5.65□□□□□ -1.5
GABPB1-204ENST00000396464 KDM1AO60341 852 aa5.65□□□□□ -1.5
GABPB1-204ENST00000396464 BUB1BO60566 1050 aaPredicted RBP5.65□□□□□ -1.5
GABPB1-204ENST00000396464 FGF18O76093 207 aa5.65□□□□□ -1.5
GABPB1-204ENST00000396464 ZNF205O95201 554 aa5.65□□□□□ -1.5
GABPB1-204ENST00000396464 MYF5P13349 255 aa5.65□□□□□ -1.5
GABPB1-204ENST00000396464 ITGA4P13612 1032 aa5.65□□□□□ -1.5
GABPB1-204ENST00000396464 XBP1P17861 261 aa5.65□□□□□ -1.5
GABPB1-204ENST00000396464 MTNR1BP49286 362 aa5.65□□□□□ -1.5
GABPB1-204ENST00000396464 NR1H2P55055 460 aa5.65□□□□□ -1.5
GABPB1-204ENST00000396464 PHC1P78364 1004 aa5.65□□□□□ -1.5
GABPB1-204ENST00000396464 AUHQ13825 339 aaKnown RBP5.65□□□□□ -1.5
GABPB1-204ENST00000396464 PPP2R5DQ14738 602 aa5.65□□□□□ -1.5
GABPB1-204ENST00000396464 KIR3DS1Q14943 382 aa5.65□□□□□ -1.5
GABPB1-204ENST00000396464 NR1I3Q14994 352 aa5.65□□□□□ -1.5
GABPB1-204ENST00000396464 ANKRD39Q53RE8 183 aa5.65□□□□□ -1.5
GABPB1-204ENST00000396464 CCDC158Q5M9N0 1113 aa5.65□□□□□ -1.5
GABPB1-204ENST00000396464 JMJD6Q6NYC1 403 aaPredicted RBP5.65□□□□□ -1.5
GABPB1-204ENST00000396464 ZC3H14Q6PJT7 736 aaKnown RBP5.65□□□□□ -1.5
GABPB1-204ENST00000396464 APOA5Q6Q788 366 aa5.65□□□□□ -1.5
GABPB1-204ENST00000396464 MAEAQ7L5Y9 396 aa5.65□□□□□ -1.5
GABPB1-204ENST00000396464 SLCO6A1Q86UG4 719 aa5.65□□□□□ -1.5
GABPB1-204ENST00000396464 GALNT13Q8IUC8 556 aa5.65□□□□□ -1.5
GABPB1-204ENST00000396464 SSH3Q8TE77 659 aa5.65□□□□□ -1.5
GABPB1-204ENST00000396464 SSH1Q8WYL5 1049 aa5.65□□□□□ -1.5
GABPB1-204ENST00000396464 SLC2A13Q96QE2 648 aa5.65□□□□□ -1.5
GABPB1-204ENST00000396464 CGRRF1Q99675 332 aa5.65□□□□□ -1.5
GABPB1-204ENST00000396464 KATNAL1Q9BW62 490 aa5.65□□□□□ -1.5
GABPB1-204ENST00000396464 GP6Q9HCN6 339 aa5.65□□□□□ -1.5
GABPB1-204ENST00000396464 PLSCR4Q9NRQ2 329 aa5.65□□□□□ -1.5
GABPB1-204ENST00000396464 AP5S1Q9NUS5 200 aa5.65□□□□□ -1.5
GABPB1-204ENST00000396464 IMPACTQ9P2X3 320 aa5.65□□□□□ -1.5
GABPB1-204ENST00000396464 STAP2Q9UGK3 403 aa5.65□□□□□ -1.5
GABPB1-204ENST00000396464 ITGB1BP2Q9UKP3 347 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms