RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 IRX3P78415 501 aaPredicted RBP9.74□□□□□ -0.85
TDP1-202ENST00000393452 CDR2Q01850 454 aa9.74□□□□□ -0.85
TDP1-202ENST00000393452 PAK2Q13177 524 aa9.74□□□□□ -0.85
TDP1-202ENST00000393452 ZACNQ401N2 412 aa9.74□□□□□ -0.85
TDP1-202ENST00000393452 SLFN12LQ6IEE8 588 aa9.74□□□□□ -0.85
TDP1-202ENST00000393452 GADL1Q6ZQY3 521 aa9.74□□□□□ -0.85
TDP1-202ENST00000393452 MREGQ8N565 214 aa9.74□□□□□ -0.85
TDP1-202ENST00000393452 TATDN2Q93075 761 aa9.74□□□□□ -0.85
TDP1-202ENST00000393452 ASCC2Q9H1I8 757 aaPredicted RBP9.74□□□□□ -0.85
TDP1-202ENST00000393452 ACP6Q9NPH0 428 aa9.74□□□□□ -0.85
TDP1-202ENST00000393452 MCM3APO60318 1980 aa9.74□□□□□ -0.85
TDP1-202ENST00000393452 GOLGA6BA6NDN3 693 aa9.74□□□□□ -0.85
TDP1-202ENST00000393452 RNF40O75150 1001 aa9.74□□□□□ -0.85
TDP1-202ENST00000393452 MMEP08473 750 aa9.74□□□□□ -0.85
TDP1-202ENST00000393452 STRN3Q13033 797 aa9.74□□□□□ -0.85
TDP1-202ENST00000393452 METTL7BQ6UX53 244 aa9.74□□□□□ -0.85
TDP1-202ENST00000393452 CRELD2Q6UXH1 353 aaPredicted RBP9.74□□□□□ -0.85
TDP1-202ENST00000393452 NCAPG2Q86XI2 1143 aa9.74□□□□□ -0.85
TDP1-202ENST00000393452 KLHL7Q8IXQ5 586 aa9.74□□□□□ -0.85
TDP1-202ENST00000393452 ANKRD13AQ8IZ07 590 aa9.74□□□□□ -0.85
TDP1-202ENST00000393452 CASKIN2Q8WXE0 1202 aa9.74□□□□□ -0.85
TDP1-202ENST00000393452 OTUD5Q96G74 571 aa9.74□□□□□ -0.85
TDP1-202ENST00000393452 HAPLN2Q9GZV7 340 aa9.74□□□□□ -0.85
TDP1-202ENST00000393452 SLITRK6Q9H5Y7 841 aa9.74□□□□□ -0.85
TDP1-202ENST00000393452 TMEM134Q9H6X4 195 aa9.74□□□□□ -0.85
TDP1-202ENST00000393452 ELP3Q9H9T3 547 aa9.74□□□□□ -0.85
TDP1-202ENST00000393452 AGO2Q9UKV8 859 aaKnown RBP9.74□□□□□ -0.85
TDP1-202ENST00000393452 NFU1Q9UMS0 254 aa9.74□□□□□ -0.85
TDP1-202ENST00000393452 AGTPBP1Q9UPW5 1226 aa9.74□□□□□ -0.85
TDP1-202ENST00000393452 PPME1Q9Y570 386 aa9.74□□□□□ -0.85
TDP1-202ENST00000393452 ALG6Q9Y672 507 aa9.74□□□□□ -0.85
TDP1-202ENST00000393452 ESYT3A0FGR9 886 aa9.73□□□□□ -0.85
TDP1-202ENST00000393452 MIF4GDA9UHW6 222 aaKnown RBP9.73□□□□□ -0.85
TDP1-202ENST00000393452 K7ERI5 159 aa9.73□□□□□ -0.85
TDP1-202ENST00000393452 KRIT1O00522 736 aa9.73□□□□□ -0.85
TDP1-202ENST00000393452 SLC25A27O95847 323 aa9.73□□□□□ -0.85
TDP1-202ENST00000393452 C4BPAP04003 597 aaKnown RBP9.73□□□□□ -0.85
TDP1-202ENST00000393452 CYP1A2P05177 515 aa9.73□□□□□ -0.85
TDP1-202ENST00000393452 ITGA4P13612 1032 aa9.73□□□□□ -0.85
TDP1-202ENST00000393452 PDE6CP51160 858 aa9.73□□□□□ -0.85
TDP1-202ENST00000393452 STAT5BP51692 787 aa9.73□□□□□ -0.85
TDP1-202ENST00000393452 POU5F1Q01860 360 aaKnown RBP9.73□□□□□ -0.85
TDP1-202ENST00000393452 TAF3Q5VWG9 929 aa9.73□□□□□ -0.85
TDP1-202ENST00000393452 ALS2CLQ60I27 953 aa9.73□□□□□ -0.85
TDP1-202ENST00000393452 TSEN2Q8NCE0 465 aaKnown RBP9.73□□□□□ -0.85
TDP1-202ENST00000393452 DEPTORQ8TB45 409 aa9.73□□□□□ -0.85
TDP1-202ENST00000393452 WHAMMQ8TF30 809 aa9.73□□□□□ -0.85
TDP1-202ENST00000393452 SEPT1Q8WYJ6 367 aa9.73□□□□□ -0.85
TDP1-202ENST00000393452 ALG3Q92685 438 aa9.73□□□□□ -0.85
TDP1-202ENST00000393452 CLMNQ96JQ2 1002 aa9.73□□□□□ -0.85
TDP1-202ENST00000393452 FGD4Q96M96 766 aa9.73□□□□□ -0.85
TDP1-202ENST00000393452 RPS6KC1Q96S38 1066 aa9.73□□□□□ -0.85
TDP1-202ENST00000393452 SH3GL2Q99962 352 aa9.73□□□□□ -0.85
TDP1-202ENST00000393452 AP1M1Q9BXS5 423 aa9.73□□□□□ -0.85
TDP1-202ENST00000393452 R3HDMLQ9H3Y0 253 aa9.73□□□□□ -0.85
TDP1-202ENST00000393452 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.73□□□□□ -0.852e-9■■■■■ 223.6
TDP1-202ENST00000393452 NRBP2Q9NSY0 501 aa9.73□□□□□ -0.85
TDP1-202ENST00000393452 CTTNBP2NLQ9P2B4 639 aa9.73□□□□□ -0.85
TDP1-202ENST00000393452 GTF3C4Q9UKN8 822 aa9.73□□□□□ -0.85
TDP1-202ENST00000393452 ADGRA2Q96PE1 1338 aa9.73□□□□□ -0.85
TDP1-202ENST00000393452 DNAJC25-GNG10A0A024R161 153 aa9.73□□□□□ -0.85
TDP1-202ENST00000393452 A0A0B4J269 797 aa9.73□□□□□ -0.85
TDP1-202ENST00000393452 LRRIQ4A6NIV6 560 aa9.73□□□□□ -0.85
TDP1-202ENST00000393452 PHACTR2O75167 634 aa9.73□□□□□ -0.85
TDP1-202ENST00000393452 MAFO75444 373 aaPredicted RBP9.73□□□□□ -0.85
TDP1-202ENST00000393452 LDHAP00338 332 aaKnown RBP9.73□□□□□ -0.85
TDP1-202ENST00000393452 ECHS1P30084 290 aa9.73□□□□□ -0.85
TDP1-202ENST00000393452 COPB2P35606 906 aa9.73□□□□□ -0.85
TDP1-202ENST00000393452 WNT7BP56706 349 aa9.73□□□□□ -0.85
TDP1-202ENST00000393452 NLRP11P59045 1033 aaKnown RBP9.73□□□□□ -0.85
TDP1-202ENST00000393452 ERVK-9P63128 1117 aa9.73□□□□□ -0.85
TDP1-202ENST00000393452 PDE4CQ08493 712 aa9.73□□□□□ -0.85
TDP1-202ENST00000393452 CUL1Q13616 776 aa9.73□□□□□ -0.85
TDP1-202ENST00000393452 MOGSQ13724 837 aa9.73□□□□□ -0.85
TDP1-202ENST00000393452 TRADDQ15628 312 aa9.73□□□□□ -0.85
TDP1-202ENST00000393452 CLUL1Q15846 466 aa9.73□□□□□ -0.85
TDP1-202ENST00000393452 FAM160B1Q5W0V3 765 aa9.73□□□□□ -0.85
TDP1-202ENST00000393452 MORC4Q8TE76 937 aa9.73□□□□□ -0.85
TDP1-202ENST00000393452 RIN2Q8WYP3 895 aaPredicted RBP9.73□□□□□ -0.85
TDP1-202ENST00000393452 SEC14L1Q92503 715 aa9.73□□□□□ -0.85
TDP1-202ENST00000393452 DHX38Q92620 1227 aaKnown RBP9.73□□□□□ -0.85
TDP1-202ENST00000393452 ZBTB9Q96C00 473 aa9.73□□□□□ -0.85
TDP1-202ENST00000393452 RNPC3Q96LT9 517 aaKnown RBP9.73□□□□□ -0.85
TDP1-202ENST00000393452 PI4K2AQ9BTU6 479 aa9.73□□□□□ -0.85
TDP1-202ENST00000393452 DDX47Q9H0S4 455 aaKnown RBP9.73□□□□□ -0.85
TDP1-202ENST00000393452 TAF1DQ9H5J8 278 aaPredicted RBP9.73□□□□□ -0.85
TDP1-202ENST00000393452 ADCY3O60266 1144 aa9.72□□□□□ -0.85
TDP1-202ENST00000393452 GGPS1O95749 300 aa9.72□□□□□ -0.85
TDP1-202ENST00000393452 FGGP02679 453 aa9.72□□□□□ -0.85
TDP1-202ENST00000393452 EDN1P05305 212 aa9.72□□□□□ -0.85
TDP1-202ENST00000393452 FAM153BP0C7A2 387 aa9.72□□□□□ -0.85
TDP1-202ENST00000393452 TCF7P36402 384 aaPredicted RBP9.72□□□□□ -0.85
TDP1-202ENST00000393452 ACOT2P49753 483 aa9.72□□□□□ -0.85
TDP1-202ENST00000393452 PPIL2Q13356 520 aa9.72□□□□□ -0.85
TDP1-202ENST00000393452 CAPSQ13938 189 aa9.72□□□□□ -0.85
TDP1-202ENST00000393452 FAM153CQ494X1 144 aa9.72□□□□□ -0.85
TDP1-202ENST00000393452 TDRD10Q5VZ19 366 aaKnown RBP9.72□□□□□ -0.85
TDP1-202ENST00000393452 KCNV1Q6PIU1 500 aa9.72□□□□□ -0.85
TDP1-202ENST00000393452 IQCKQ8N0W5 287 aa9.72□□□□□ -0.85
TDP1-202ENST00000393452 CD101Q93033 1021 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms