RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 PDXKO00764 312 aa20.85■□□□□ 0.93
SHANK1-203ENST00000391813 PSMA2P25787 234 aa20.85■□□□□ 0.93
SHANK1-203ENST00000391813 NEK2P51955 445 aa20.85■□□□□ 0.93
SHANK1-203ENST00000391813 CACNB3P54284 484 aa20.85■□□□□ 0.93
SHANK1-203ENST00000391813 CDK17Q00537 523 aa20.85■□□□□ 0.93
SHANK1-203ENST00000391813 PDIA5Q14554 519 aa20.85■□□□□ 0.93
SHANK1-203ENST00000391813 LCA5Q86VQ0 697 aa20.85■□□□□ 0.93
SHANK1-203ENST00000391813 RNF169Q8NCN4 708 aa20.85■□□□□ 0.93
SHANK1-203ENST00000391813 PRPF31Q8WWY3 499 aaKnown RBP20.85■□□□□ 0.93
SHANK1-203ENST00000391813 SLC7A3Q8WY07 619 aa20.85■□□□□ 0.93
SHANK1-203ENST00000391813 SERPINB12Q96P63 405 aa20.85■□□□□ 0.93
SHANK1-203ENST00000391813 FEM1BQ9UK73 627 aa20.85■□□□□ 0.93
SHANK1-203ENST00000391813 GSTA4O15217 222 aa20.85■□□□□ 0.93
SHANK1-203ENST00000391813 FSBPO95073 299 aa20.85■□□□□ 0.93
SHANK1-203ENST00000391813 GALCP54803 685 aa20.85■□□□□ 0.93
SHANK1-203ENST00000391813 LONRF1Q17RB8 773 aa20.85■□□□□ 0.93
SHANK1-203ENST00000391813 NAF1Q96HR8 494 aaKnown RBP20.85■□□□□ 0.93
SHANK1-203ENST00000391813 CEP19Q96LK0 163 aa20.85■□□□□ 0.93
SHANK1-203ENST00000391813 PHF20Q9BVI0 1012 aa20.85■□□□□ 0.93
SHANK1-203ENST00000391813 FIGNQ5HY92 759 aa20.85■□□□□ 0.93
SHANK1-203ENST00000391813 KLC3Q6P597 504 aa20.85■□□□□ 0.93
SHANK1-203ENST00000391813 ENOSF1Q7L5Y1 443 aa20.85■□□□□ 0.93
SHANK1-203ENST00000391813 C1orf54Q8WWF1 131 aa20.85■□□□□ 0.93
SHANK1-203ENST00000391813 UVRAGQ9P2Y5 699 aa20.85■□□□□ 0.93
SHANK1-203ENST00000391813 CNOT7Q9UIV1 285 aaKnown RBP20.85■□□□□ 0.93
SHANK1-203ENST00000391813 HACL1Q9UJ83 578 aa20.85■□□□□ 0.93
SHANK1-203ENST00000391813 ITSN1Q15811 1721 aa20.85■□□□□ 0.93
SHANK1-203ENST00000391813 PALM3A6NDB9 673 aaPredicted RBP20.85■□□□□ 0.93
SHANK1-203ENST00000391813 PPP1R3GB7ZBB8 358 aa20.85■□□□□ 0.93
SHANK1-203ENST00000391813 RPS6KA5O75582 802 aa20.85■□□□□ 0.93
SHANK1-203ENST00000391813 KITP10721 976 aa20.85■□□□□ 0.93
SHANK1-203ENST00000391813 THOC5Q13769 683 aaKnown RBP20.85■□□□□ 0.93
SHANK1-203ENST00000391813 SMARCAL1Q9NZC9 954 aa20.85■□□□□ 0.93
SHANK1-203ENST00000391813 HPSEQ9Y251 543 aa20.85■□□□□ 0.93
SHANK1-203ENST00000391813 E9PMD0 336 aa20.84■□□□□ 0.93
SHANK1-203ENST00000391813 PAPOLAP51003 745 aaKnown RBP20.84■□□□□ 0.93
SHANK1-203ENST00000391813 TGFB2P61812 414 aa20.84■□□□□ 0.93
SHANK1-203ENST00000391813 POTEAQ6S8J7 498 aa20.84■□□□□ 0.93
SHANK1-203ENST00000391813 TRIM72Q6ZMU5 477 aa20.84■□□□□ 0.93
SHANK1-203ENST00000391813 DCLRE1BQ9H816 532 aa20.84■□□□□ 0.93
SHANK1-203ENST00000391813 ZC4H2Q9NQZ6 224 aa20.84■□□□□ 0.93
SHANK1-203ENST00000391813 SATB2Q9UPW6 733 aa20.84■□□□□ 0.93
SHANK1-203ENST00000391813 DPEP1P16444 411 aa20.84■□□□□ 0.93
SHANK1-203ENST00000391813 SLC16A2P36021 539 aa20.84■□□□□ 0.93
SHANK1-203ENST00000391813 SLC44A4Q53GD3 710 aa20.84■□□□□ 0.93
SHANK1-203ENST00000391813 FASTKD5Q7L8L6 764 aaKnown RBP20.84■□□□□ 0.93
SHANK1-203ENST00000391813 IL25Q9H293 177 aa20.84■□□□□ 0.93
SHANK1-203ENST00000391813 CCDC134Q9H6E4 229 aa20.84■□□□□ 0.93
SHANK1-203ENST00000391813 KIAA1586Q9HCI6 787 aa20.84■□□□□ 0.93
SHANK1-203ENST00000391813 IL1RAPL1Q9NZN1 696 aa20.84■□□□□ 0.93
SHANK1-203ENST00000391813 KRT7P08729 469 aa20.84■□□□□ 0.93
SHANK1-203ENST00000391813 HOXD10P28358 340 aa20.84■□□□□ 0.93
SHANK1-203ENST00000391813 MMP14P50281 582 aa20.84■□□□□ 0.93
SHANK1-203ENST00000391813 GRM4Q14833 912 aa20.84■□□□□ 0.93
SHANK1-203ENST00000391813 HIF1AQ16665 826 aa20.84■□□□□ 0.93
SHANK1-203ENST00000391813 DCLK2Q8N568 766 aa20.84■□□□□ 0.93
SHANK1-203ENST00000391813 VPS39Q96JC1 886 aa20.84■□□□□ 0.93
SHANK1-203ENST00000391813 CARD9Q9H257 536 aa20.84■□□□□ 0.93
SHANK1-203ENST00000391813 NPHS2Q9NP85 383 aa20.84■□□□□ 0.93
SHANK1-203ENST00000391813 STRIP2Q9ULQ0 834 aa20.84■□□□□ 0.93
SHANK1-203ENST00000391813 KDM1AO60341 852 aa20.84■□□□□ 0.93
SHANK1-203ENST00000391813 RTN2O75298 545 aa20.84■□□□□ 0.93
SHANK1-203ENST00000391813 GUCY1A2P33402 732 aa20.84■□□□□ 0.93
SHANK1-203ENST00000391813 CASP2P42575 452 aa20.84■□□□□ 0.93
SHANK1-203ENST00000391813 BTNL9Q6UXG8 535 aa20.84■□□□□ 0.93
SHANK1-203ENST00000391813 RNF25Q96BH1 459 aaPredicted RBP20.84■□□□□ 0.93
SHANK1-203ENST00000391813 RBM15Q96T37 977 aaKnown RBP eCLIP20.84■□□□□ 0.93
SHANK1-203ENST00000391813 IP6K2Q9UHH9 426 aa20.84■□□□□ 0.93
SHANK1-203ENST00000391813 PNPLA7Q6ZV29 1317 aa20.83■□□□□ 0.93
SHANK1-203ENST00000391813 ENTPD3O75355 529 aa20.83■□□□□ 0.93
SHANK1-203ENST00000391813 TAC1P20366 129 aa20.83■□□□□ 0.93
SHANK1-203ENST00000391813 KDSRQ06136 332 aa20.83■□□□□ 0.93
SHANK1-203ENST00000391813 SLC29A2Q14542 456 aa20.83■□□□□ 0.93
SHANK1-203ENST00000391813 KYNUQ16719 465 aa20.83■□□□□ 0.93
SHANK1-203ENST00000391813 MIS18BP1Q6P0N0 1132 aa20.83■□□□□ 0.93
SHANK1-203ENST00000391813 AGPAT1Q99943 283 aa20.83■□□□□ 0.93
SHANK1-203ENST00000391813 UBN1Q9NPG3 1134 aa20.83■□□□□ 0.93
SHANK1-203ENST00000391813 PSMC3IPQ9P2W1 217 aaPredicted RBP20.83■□□□□ 0.93
SHANK1-203ENST00000391813 DMGDHQ9UI17 866 aaKnown RBP20.83■□□□□ 0.93
SHANK1-203ENST00000391813 PXDNLA1KZ92 1463 aa20.83■□□□□ 0.93
SHANK1-203ENST00000391813 ESRRBO95718 433 aa20.83■□□□□ 0.93
SHANK1-203ENST00000391813 GCLMP48507 274 aa20.83■□□□□ 0.93
SHANK1-203ENST00000391813 DDX42Q86XP3 938 aaKnown RBP eCLIP20.83■□□□□ 0.93
SHANK1-203ENST00000391813 MICALL2Q8IY33 904 aa20.83■□□□□ 0.93
SHANK1-203ENST00000391813 PIGOQ8TEQ8 1089 aa20.83■□□□□ 0.93
SHANK1-203ENST00000391813 STK33Q9BYT3 514 aa20.83■□□□□ 0.93
SHANK1-203ENST00000391813 DDX56Q9NY93 547 aaKnown RBP20.83■□□□□ 0.93
SHANK1-203ENST00000391813 GSG1L2A8MUP6 293 aa20.83■□□□□ 0.92
SHANK1-203ENST00000391813 SLC16A3O15427 465 aaKnown RBP20.83■□□□□ 0.92
SHANK1-203ENST00000391813 ORC4O43929 436 aa20.83■□□□□ 0.92
SHANK1-203ENST00000391813 UCHL3P15374 230 aa20.83■□□□□ 0.92
SHANK1-203ENST00000391813 KLRC1P26715 233 aa20.83■□□□□ 0.92
SHANK1-203ENST00000391813 HHIPL2Q6UWX4 724 aa20.83■□□□□ 0.92
SHANK1-203ENST00000391813 USP49Q70CQ1 688 aa20.83■□□□□ 0.92
SHANK1-203ENST00000391813 CYFIP1Q7L576 1253 aa20.83■□□□□ 0.92
SHANK1-203ENST00000391813 CASKIN2Q8WXE0 1202 aa20.83■□□□□ 0.92
SHANK1-203ENST00000391813 GCOM2Q9BZD3 368 aaPredicted RBP20.83■□□□□ 0.92
SHANK1-203ENST00000391813 SUN2Q9UH99 717 aa20.83■□□□□ 0.92
SHANK1-203ENST00000391813 ARHGAP26Q9UNA1 814 aa20.83■□□□□ 0.92
SHANK1-203ENST00000391813 CHEK2O96017 543 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms