RNA–Protein interactions for RNA: ENST00000265565.9

SCAP-201, Transcript of SREBF chaperone, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAP, Length 4,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-201ENST00000265565 ATG16L1Q676U5 607 aa17.64■□□□□ 0.41
SCAP-201ENST00000265565 NCAPG2Q86XI2 1143 aa17.64■□□□□ 0.41
SCAP-201ENST00000265565 LINC00116Q8NCU8 138 aa17.64■□□□□ 0.41
SCAP-201ENST00000265565 CCT6BQ92526 530 aa17.64■□□□□ 0.41
SCAP-201ENST00000265565 MTRQ99707 1265 aa17.64■□□□□ 0.41
SCAP-201ENST00000265565 PI4K2AQ9BTU6 479 aa17.64■□□□□ 0.41
SCAP-201ENST00000265565 MIS12Q9H081 205 aa17.64■□□□□ 0.41
SCAP-201ENST00000265565 VCX3AQ9NNX9 186 aa17.64■□□□□ 0.41
SCAP-201ENST00000265565 AGPAT3Q9NRZ7 376 aa17.64■□□□□ 0.41
SCAP-201ENST00000265565 KIF1CO43896 1103 aaKnown RBP17.64■□□□□ 0.41
SCAP-201ENST00000265565 LPXNO60711 386 aa17.64■□□□□ 0.41
SCAP-201ENST00000265565 LMNAP02545 664 aaKnown RBP17.64■□□□□ 0.41
SCAP-201ENST00000265565 SMARCA1P28370 1054 aa17.64■□□□□ 0.41
SCAP-201ENST00000265565 SWSAP1Q6NVH7 229 aa17.64■□□□□ 0.41
SCAP-201ENST00000265565 LDHDQ86WU2 507 aa17.64■□□□□ 0.41
SCAP-201ENST00000265565 AFAP1L2Q8N4X5 818 aa17.64■□□□□ 0.41
SCAP-201ENST00000265565 HEXIM2Q96MH2 286 aaKnown RBP17.64■□□□□ 0.41
SCAP-201ENST00000265565 UBN1Q9NPG3 1134 aa17.64■□□□□ 0.41
SCAP-201ENST00000265565 NEU2Q9Y3R4 380 aa17.64■□□□□ 0.41
SCAP-201ENST00000265565 TBX3O15119 743 aa17.63■□□□□ 0.41
SCAP-201ENST00000265565 MMP10P09238 476 aa17.63■□□□□ 0.41
SCAP-201ENST00000265565 MARK3P27448 753 aa17.63■□□□□ 0.41
SCAP-201ENST00000265565 TRADDQ15628 312 aa17.63■□□□□ 0.41
SCAP-201ENST00000265565 MIIPQ5JXC2 388 aa17.63■□□□□ 0.41
SCAP-201ENST00000265565 MIS18BP1Q6P0N0 1132 aa17.63■□□□□ 0.41
SCAP-201ENST00000265565 WDR75Q8IWA0 830 aaKnown RBP17.63■□□□□ 0.41
SCAP-201ENST00000265565 OSBPL8Q9BZF1 889 aa17.63■□□□□ 0.41
SCAP-201ENST00000265565 F5H423 210 aaPredicted RBP17.63■□□□□ 0.41
SCAP-201ENST00000265565 GPC4O75487 556 aa17.63■□□□□ 0.41
SCAP-201ENST00000265565 GMNNO75496 209 aa17.63■□□□□ 0.41
SCAP-201ENST00000265565 UBOX5O94941 541 aa17.63■□□□□ 0.41
SCAP-201ENST00000265565 RPS6KA2Q15349 733 aa17.63■□□□□ 0.41
SCAP-201ENST00000265565 MMEL1Q495T6 779 aa17.63■□□□□ 0.41
SCAP-201ENST00000265565 PPP1R2P3Q6NXS1 205 aa17.63■□□□□ 0.41
SCAP-201ENST00000265565 ADPGKQ9BRR6 497 aa17.63■□□□□ 0.41
SCAP-201ENST00000265565 TBC1D22BQ9NU19 505 aa17.63■□□□□ 0.41
SCAP-201ENST00000265565 SLC9A2Q9UBY0 812 aa17.63■□□□□ 0.41
SCAP-201ENST00000265565 FIS1Q9Y3D6 152 aa17.63■□□□□ 0.41
SCAP-201ENST00000265565 NWD1Q149M9 1564 aa17.63■□□□□ 0.41
SCAP-201ENST00000265565 PFDN1O60925 122 aa17.63■□□□□ 0.41
SCAP-201ENST00000265565 SKOR1P84550 965 aa17.63■□□□□ 0.41
SCAP-201ENST00000265565 PDE1CQ14123 709 aaPredicted RBP17.63■□□□□ 0.41
SCAP-201ENST00000265565 ARHGAP27Q6ZUM4 889 aa17.63■□□□□ 0.41
SCAP-201ENST00000265565 ATP11CQ8NB49 1132 aa17.63■□□□□ 0.41
SCAP-201ENST00000265565 MCPH1Q8NEM0 835 aa17.63■□□□□ 0.41
SCAP-201ENST00000265565 NLRP4Q96MN2 994 aa17.63■□□□□ 0.41
SCAP-201ENST00000265565 ZSWIM1Q9BR11 485 aa17.63■□□□□ 0.41
SCAP-201ENST00000265565 AIPL1Q9NZN9 384 aa17.63■□□□□ 0.41
SCAP-201ENST00000265565 KIF3CO14782 793 aa17.63■□□□□ 0.41
SCAP-201ENST00000265565 ECE1P42892 770 aa17.63■□□□□ 0.41
SCAP-201ENST00000265565 ACOT2P49753 483 aa17.63■□□□□ 0.41
SCAP-201ENST00000265565 PLCB4Q15147 1175 aa17.63■□□□□ 0.41
SCAP-201ENST00000265565 SNRNP35Q16560 246 aaKnown RBP17.63■□□□□ 0.41
SCAP-201ENST00000265565 HIF1AQ16665 826 aa17.63■□□□□ 0.41
SCAP-201ENST00000265565 CDC42EP5Q6NZY7 148 aa17.63■□□□□ 0.41
SCAP-201ENST00000265565 PODNQ7Z5L7 613 aa17.63■□□□□ 0.41
SCAP-201ENST00000265565 PPWD1Q96BP3 646 aaKnown RBP17.63■□□□□ 0.41
SCAP-201ENST00000265565 CCDC124Q96CT7 223 aaKnown RBP17.63■□□□□ 0.41
SCAP-201ENST00000265565 APOL6Q9BWW8 343 aa17.63■□□□□ 0.41
SCAP-201ENST00000265565 ROPN1BQ9BZX4 212 aaPredicted RBP17.63■□□□□ 0.41
SCAP-201ENST00000265565 ROPN1Q9HAT0 212 aaPredicted RBP17.63■□□□□ 0.41
SCAP-201ENST00000265565 MSH4O15457 936 aa17.62■□□□□ 0.41
SCAP-201ENST00000265565 ANP32DO95626 131 aa17.62■□□□□ 0.41
SCAP-201ENST00000265565 CCND1P24385 295 aa17.62■□□□□ 0.41
SCAP-201ENST00000265565 MAGEA4P43358 317 aa17.62■□□□□ 0.41
SCAP-201ENST00000265565 IFI35P80217 286 aaPredicted RBP17.62■□□□□ 0.41
SCAP-201ENST00000265565 KLHL38Q2WGJ6 581 aa17.62■□□□□ 0.41
SCAP-201ENST00000265565 MDH1BQ5I0G3 518 aa17.62■□□□□ 0.41
SCAP-201ENST00000265565 MED15Q96RN5 788 aa17.62■□□□□ 0.41
SCAP-201ENST00000265565 CYP4F11Q9HBI6 524 aa17.62■□□□□ 0.41
SCAP-201ENST00000265565 PRR12Q9ULL5 1215 aa17.62■□□□□ 0.41
SCAP-201ENST00000265565 ASNSP08243 561 aa17.62■□□□□ 0.41
SCAP-201ENST00000265565 NPR1P16066 1061 aa17.62■□□□□ 0.41
SCAP-201ENST00000265565 GARSP41250 739 aaKnown RBP17.62■□□□□ 0.41
SCAP-201ENST00000265565 COPS2P61201 443 aa17.62■□□□□ 0.41
SCAP-201ENST00000265565 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.62■□□□□ 0.41
SCAP-201ENST00000265565 DEPDC1BQ8WUY9 529 aa17.62■□□□□ 0.41
SCAP-201ENST00000265565 MKNK1Q9BUB5 465 aa17.62■□□□□ 0.41
SCAP-201ENST00000265565 KDSRQ06136 332 aa17.62■□□□□ 0.41
SCAP-201ENST00000265565 FAM129AQ9BZQ8 928 aa17.62■□□□□ 0.41
SCAP-201ENST00000265565 GDF3Q9NR23 364 aa17.62■□□□□ 0.41
SCAP-201ENST00000265565 MYO3BQ8WXR4 1341 aa17.62■□□□□ 0.41
SCAP-201ENST00000265565 PJA2O43164 708 aa17.61■□□□□ 0.41
SCAP-201ENST00000265565 CCND2P30279 289 aa17.61■□□□□ 0.41
SCAP-201ENST00000265565 NPEPPSP55786 919 aa17.61■□□□□ 0.41
SCAP-201ENST00000265565 SLFN12LQ6IEE8 588 aa17.61■□□□□ 0.41
SCAP-201ENST00000265565 TMC3Q7Z5M5 1100 aa17.61■□□□□ 0.41
SCAP-201ENST00000265565 COL23A1Q86Y22 540 aaPredicted RBP17.61■□□□□ 0.41
SCAP-201ENST00000265565 SLC20A1Q8WUM9 679 aa17.61■□□□□ 0.41
SCAP-201ENST00000265565 L3MBTL1Q9Y468 752 aa17.61■□□□□ 0.41
SCAP-201ENST00000265565 GIPC1O14908 333 aa17.61■□□□□ 0.41
SCAP-201ENST00000265565 MED7O43513 233 aa17.61■□□□□ 0.41
SCAP-201ENST00000265565 SGPL1O95470 568 aa17.61■□□□□ 0.41
SCAP-201ENST00000265565 RALAP11233 206 aa17.61■□□□□ 0.41
SCAP-201ENST00000265565 YWHABP31946 246 aaKnown RBP17.61■□□□□ 0.41
SCAP-201ENST00000265565 JAK3P52333 1124 aa17.61■□□□□ 0.41
SCAP-201ENST00000265565 PSMC5P62195 406 aa17.61■□□□□ 0.41
SCAP-201ENST00000265565 SLC20A2Q08357 652 aa17.61■□□□□ 0.41
SCAP-201ENST00000265565 SEPT6Q14141 434 aa17.61■□□□□ 0.41
SCAP-201ENST00000265565 CCDC125Q86Z20 511 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms