RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 LILRA6Q6PI73 481 aa15.33■□□□□ 0.04
DDX39A-201ENST00000242776 HSCBQ8IWL3 235 aa15.33■□□□□ 0.04
DDX39A-201ENST00000242776 ITFG1Q8TB96 612 aa15.33■□□□□ 0.04
DDX39A-201ENST00000242776 HDAC7Q8WUI4 952 aa15.33■□□□□ 0.04
DDX39A-201ENST00000242776 TCP11Q8WWU5 503 aa15.33■□□□□ 0.04
DDX39A-201ENST00000242776 ING5Q8WYH8 240 aa15.33■□□□□ 0.04
DDX39A-201ENST00000242776 MTRQ99707 1265 aa15.33■□□□□ 0.04
DDX39A-201ENST00000242776 LXNQ9BS40 222 aa15.33■□□□□ 0.04
DDX39A-201ENST00000242776 RHOBTB2Q9BYZ6 727 aa15.33■□□□□ 0.04
DDX39A-201ENST00000242776 CSRNP2Q9H175 543 aa15.33■□□□□ 0.04
DDX39A-201ENST00000242776 SH3GLB2Q9NR46 395 aa15.33■□□□□ 0.04
DDX39A-201ENST00000242776 ADAM28Q9UKQ2 775 aa15.33■□□□□ 0.04
DDX39A-201ENST00000242776 VAV3Q9UKW4 847 aa15.33■□□□□ 0.04
DDX39A-201ENST00000242776 CDH7Q9ULB5 785 aa15.33■□□□□ 0.04
DDX39A-201ENST00000242776 KCNJ14Q9UNX9 436 aa15.33■□□□□ 0.04
DDX39A-201ENST00000242776 NID2Q14112 1375 aa15.33■□□□□ 0.04
DDX39A-201ENST00000242776 CASTOR2A6NHX0 329 aa15.32■□□□□ 0.04
DDX39A-201ENST00000242776 P4HBP07237 508 aaKnown RBP15.32■□□□□ 0.04
DDX39A-201ENST00000242776 NCBP1Q09161 790 aaKnown RBP15.32■□□□□ 0.04
DDX39A-201ENST00000242776 STK3Q13188 491 aa15.32■□□□□ 0.04
DDX39A-201ENST00000242776 SLC44A4Q53GD3 710 aa15.32■□□□□ 0.04
DDX39A-201ENST00000242776 PPM1LQ5SGD2 360 aa15.32■□□□□ 0.04
DDX39A-201ENST00000242776 TRIM22Q8IYM9 498 aa15.32■□□□□ 0.04
DDX39A-201ENST00000242776 ATRIPQ8WXE1 791 aa15.32■□□□□ 0.04
DDX39A-201ENST00000242776 FGF13Q92913 245 aa15.32■□□□□ 0.04
DDX39A-201ENST00000242776 SNX21Q969T3 373 aa15.32■□□□□ 0.04
DDX39A-201ENST00000242776 ZSCAN31Q96LW9 406 aaPredicted RBP15.32■□□□□ 0.04
DDX39A-201ENST00000242776 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.32■□□□□ 0.04
DDX39A-201ENST00000242776 HCFC1R1Q9NWW0 138 aa15.32■□□□□ 0.04
DDX39A-201ENST00000242776 LIMCH1Q9UPQ0 1083 aa15.32■□□□□ 0.04
DDX39A-201ENST00000242776 VWA8A3KMH1 1905 aa15.31■□□□□ 0.04
DDX39A-201ENST00000242776 TPRP12270 2363 aaKnown RBP15.31■□□□□ 0.04
DDX39A-201ENST00000242776 DCDC2BA2VCK2 349 aa15.31■□□□□ 0.04
DDX39A-201ENST00000242776 DKC1O60832 514 aaKnown RBP eCLIP15.31■□□□□ 0.04
DDX39A-201ENST00000242776 C8AP07357 584 aa15.31■□□□□ 0.04
DDX39A-201ENST00000242776 ARF4P18085 180 aaPredicted RBP15.31■□□□□ 0.04
DDX39A-201ENST00000242776 ATXN1P54253 815 aaKnown RBP15.31■□□□□ 0.04
DDX39A-201ENST00000242776 EVCP57679 992 aa15.31■□□□□ 0.04
DDX39A-201ENST00000242776 PPP2R5CQ13362 524 aa15.31■□□□□ 0.04
DDX39A-201ENST00000242776 LIN9Q5TKA1 542 aa15.31■□□□□ 0.04
DDX39A-201ENST00000242776 TPH2Q8IWU9 490 aa15.31■□□□□ 0.04
DDX39A-201ENST00000242776 ASAP3Q8TDY4 903 aa15.31■□□□□ 0.04
DDX39A-201ENST00000242776 ZNF274Q96GC6 653 aaPredicted RBP15.31■□□□□ 0.04
DDX39A-201ENST00000242776 MBOAT7Q96N66 472 aa15.31■□□□□ 0.04
DDX39A-201ENST00000242776 SH2B1Q9NRF2 756 aaPredicted RBP15.31■□□□□ 0.04
DDX39A-201ENST00000242776 FNIP2Q9P278 1114 aa15.31■□□□□ 0.04
DDX39A-201ENST00000242776 USP18Q9UMW8 372 aa15.31■□□□□ 0.04
DDX39A-201ENST00000242776 GIT1Q9Y2X7 761 aa15.31■□□□□ 0.04
DDX39A-201ENST00000242776 NOTCH4Q99466 2003 aa15.3■□□□□ 0.04
DDX39A-201ENST00000242776 A0A087WWV3 80 aa15.3■□□□□ 0.04
DDX39A-201ENST00000242776 M0R2N6 131 aa15.3■□□□□ 0.04
DDX39A-201ENST00000242776 ASAP2O43150 1006 aa15.3■□□□□ 0.04
DDX39A-201ENST00000242776 ADAM12O43184 909 aa15.3■□□□□ 0.04
DDX39A-201ENST00000242776 PTENP60484 403 aa15.3■□□□□ 0.04
DDX39A-201ENST00000242776 MBTD1Q05BQ5 628 aa15.3■□□□□ 0.04
DDX39A-201ENST00000242776 BECN1Q14457 450 aa15.3■□□□□ 0.04
DDX39A-201ENST00000242776 LPAL2Q16609 132 aa15.3■□□□□ 0.04
DDX39A-201ENST00000242776 FAM171A1Q5VUB5 890 aa15.3■□□□□ 0.04
DDX39A-201ENST00000242776 TPRG1Q6ZUI0 275 aa15.3■□□□□ 0.04
DDX39A-201ENST00000242776 OTUD6AQ7L8S5 288 aa15.3■□□□□ 0.04
DDX39A-201ENST00000242776 EXOC8Q8IYI6 725 aa15.3■□□□□ 0.04
DDX39A-201ENST00000242776 HACE1Q8IYU2 909 aa15.3■□□□□ 0.04
DDX39A-201ENST00000242776 GSTCDQ8NEC7 633 aa15.3■□□□□ 0.04
DDX39A-201ENST00000242776 XPNPEP1Q9NQW7 623 aa15.3■□□□□ 0.04
DDX39A-201ENST00000242776 FBXW11Q9UKB1 542 aa15.3■□□□□ 0.04
DDX39A-201ENST00000242776 SMG5Q9UPR3 1016 aaKnown RBP15.3■□□□□ 0.04
DDX39A-201ENST00000242776 CPLX1O14810 134 aa15.29■□□□□ 0.04
DDX39A-201ENST00000242776 CCNT1O60563 726 aaKnown RBP15.29■□□□□ 0.04
DDX39A-201ENST00000242776 AXLP30530 894 aa15.29■□□□□ 0.04
DDX39A-201ENST00000242776 GRIK3Q13003 919 aa15.29■□□□□ 0.04
DDX39A-201ENST00000242776 CAPSQ13938 189 aa15.29■□□□□ 0.04
DDX39A-201ENST00000242776 HSP90AA2PQ14568 343 aaPredicted RBP15.29■□□□□ 0.04
DDX39A-201ENST00000242776 EPHA7Q15375 998 aa15.29■□□□□ 0.04
DDX39A-201ENST00000242776 NPY5RQ15761 445 aa15.29■□□□□ 0.04
DDX39A-201ENST00000242776 PSMD5Q16401 504 aa15.29■□□□□ 0.04
DDX39A-201ENST00000242776 MOXD1Q6UVY6 613 aa15.29■□□□□ 0.04
DDX39A-201ENST00000242776 MTSS1LQ765P7 747 aa15.29■□□□□ 0.04
DDX39A-201ENST00000242776 MAEAQ7L5Y9 396 aa15.29■□□□□ 0.04
DDX39A-201ENST00000242776 SLC7A14Q8TBB6 771 aa15.29■□□□□ 0.04
DDX39A-201ENST00000242776 CLSTN3Q9BQT9 956 aa15.29■□□□□ 0.04
DDX39A-201ENST00000242776 PHF20Q9BVI0 1012 aa15.29■□□□□ 0.04
DDX39A-201ENST00000242776 LTB4R2Q9NPC1 389 aa15.29■□□□□ 0.04
DDX39A-201ENST00000242776 CDV3Q9UKY7 258 aaKnown RBP15.29■□□□□ 0.04
DDX39A-201ENST00000242776 SF3B1O75533 1304 aaKnown RBP eCLIP15.29■□□□□ 0.041e-6■■■■■ 49.9
DDX39A-201ENST00000242776 CCDC194A0A1B0GVG4 234 aa15.28■□□□□ 0.04
DDX39A-201ENST00000242776 K7ELQ4 463 aaPredicted RBP15.28■□□□□ 0.04
DDX39A-201ENST00000242776 KIF4AO95239 1232 aa15.28■□□□□ 0.04
DDX39A-201ENST00000242776 TARSP26639 723 aaKnown RBP15.28■□□□□ 0.04
DDX39A-201ENST00000242776 CREMQ03060 361 aa15.28■□□□□ 0.04
DDX39A-201ENST00000242776 TFDP1Q14186 410 aa15.28■□□□□ 0.04
DDX39A-201ENST00000242776 AMHR2Q16671 573 aa15.28■□□□□ 0.04
DDX39A-201ENST00000242776 KRT25Q7Z3Z0 450 aa15.28■□□□□ 0.04
DDX39A-201ENST00000242776 POTEDQ86YR6 584 aa15.28■□□□□ 0.04
DDX39A-201ENST00000242776 C4orf19Q8IY42 314 aa15.28■□□□□ 0.04
DDX39A-201ENST00000242776 SECISBP2LQ93073 1101 aaKnown RBP15.28■□□□□ 0.04
DDX39A-201ENST00000242776 CCDC51Q96ER9 411 aa15.28■□□□□ 0.04
DDX39A-201ENST00000242776 MCRS1Q96EZ8 462 aa15.28■□□□□ 0.04
DDX39A-201ENST00000242776 FAM20AQ96MK3 541 aa15.28■□□□□ 0.04
DDX39A-201ENST00000242776 TTPALQ9BTX7 342 aa15.28■□□□□ 0.04
DDX39A-201ENST00000242776 CXCL16Q9H2A7 254 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms