RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 ZNF713Q8N859 430 aaPredicted RBP18.92■□□□□ 0.62
CDKN1B-201ENST00000228872 TEKT1Q969V4 418 aa18.92■□□□□ 0.62
CDKN1B-201ENST00000228872 FER1L6Q2WGJ9 1857 aa18.92■□□□□ 0.62
CDKN1B-201ENST00000228872 TCRBV7S2A1N4TA0A589 114 aa18.92■□□□□ 0.62
CDKN1B-201ENST00000228872 PDXKO00764 312 aa18.92■□□□□ 0.62
CDKN1B-201ENST00000228872 SLC16A3O15427 465 aaKnown RBP18.92■□□□□ 0.62
CDKN1B-201ENST00000228872 NR3C1P04150 777 aa18.92■□□□□ 0.62
CDKN1B-201ENST00000228872 SLC12A3P55017 1021 aa18.92■□□□□ 0.62
CDKN1B-201ENST00000228872 FAM47EQ6ZV65 393 aa18.92■□□□□ 0.62
CDKN1B-201ENST00000228872 EPM2AIP1Q7L775 607 aaPredicted RBP18.92■□□□□ 0.62
CDKN1B-201ENST00000228872 LONP2Q86WA8 852 aa18.92■□□□□ 0.62
CDKN1B-201ENST00000228872 PALB2Q86YC2 1186 aa18.92■□□□□ 0.62
CDKN1B-201ENST00000228872 TTC8Q8TAM2 541 aa18.92■□□□□ 0.62
CDKN1B-201ENST00000228872 STK33Q9BYT3 514 aa18.92■□□□□ 0.62
CDKN1B-201ENST00000228872 PITPNM3Q9BZ71 974 aa18.92■□□□□ 0.62
CDKN1B-201ENST00000228872 DHX36Q9H2U1 1008 aaKnown RBP18.92■□□□□ 0.62
CDKN1B-201ENST00000228872 RIOX1Q9H6W3 641 aa18.92■□□□□ 0.62
CDKN1B-201ENST00000228872 CHKBQ9Y259 395 aa18.92■□□□□ 0.62
CDKN1B-201ENST00000228872 ATF5Q9Y2D1 282 aaPredicted RBP18.92■□□□□ 0.62
CDKN1B-201ENST00000228872 H0Y3Z8 333 aa18.91■□□□□ 0.62
CDKN1B-201ENST00000228872 STRN3Q13033 797 aa18.91■□□□□ 0.62
CDKN1B-201ENST00000228872 CALCOCO2Q13137 446 aa18.91■□□□□ 0.62
CDKN1B-201ENST00000228872 UBE2SQ16763 222 aa18.91■□□□□ 0.62
CDKN1B-201ENST00000228872 SEL1L2Q5TEA6 688 aa18.91■□□□□ 0.62
CDKN1B-201ENST00000228872 C11orf63Q6NUN7 778 aa18.91■□□□□ 0.62
CDKN1B-201ENST00000228872 UIMC1Q96RL1 719 aa18.91■□□□□ 0.62
CDKN1B-201ENST00000228872 SEPT11Q9NVA2 429 aaKnown RBP18.91■□□□□ 0.62
CDKN1B-201ENST00000228872 NKIRAS1Q9NYS0 192 aa18.91■□□□□ 0.62
CDKN1B-201ENST00000228872 DLGAP2Q9P1A6 1054 aa18.91■□□□□ 0.62
CDKN1B-201ENST00000228872 TMEM110-MUSTN1A8MSY1 372 aa18.91■□□□□ 0.62
CDKN1B-201ENST00000228872 TNFAIP3P21580 790 aa18.91■□□□□ 0.62
CDKN1B-201ENST00000228872 RFC5P40937 340 aa18.91■□□□□ 0.62
CDKN1B-201ENST00000228872 KCNJ1P48048 391 aa18.91■□□□□ 0.62
CDKN1B-201ENST00000228872 SFR1Q86XK3 245 aa18.91■□□□□ 0.62
CDKN1B-201ENST00000228872 CYP4X1Q8N118 509 aa18.91■□□□□ 0.62
CDKN1B-201ENST00000228872 UPF1Q92900 1129 aaKnown RBP eCLIP18.91■□□□□ 0.62
CDKN1B-201ENST00000228872 TBC1D10AQ9BXI6 508 aa18.91■□□□□ 0.62
CDKN1B-201ENST00000228872 PIM2Q9P1W9 311 aa18.91■□□□□ 0.62
CDKN1B-201ENST00000228872 DNAJC12Q9UKB3 198 aa18.91■□□□□ 0.62
CDKN1B-201ENST00000228872 USP17L5A8MUK1 530 aa18.9■□□□□ 0.62
CDKN1B-201ENST00000228872 CHKAP35790 457 aa18.9■□□□□ 0.62
CDKN1B-201ENST00000228872 SSR1P43307 286 aaKnown RBP18.9■□□□□ 0.62
CDKN1B-201ENST00000228872 YARSP54577 528 aaKnown RBP18.9■□□□□ 0.62
CDKN1B-201ENST00000228872 HADHBP55084 474 aaKnown RBP18.9■□□□□ 0.62
CDKN1B-201ENST00000228872 TNIP1Q15025 636 aa18.9■□□□□ 0.62
CDKN1B-201ENST00000228872 SEPT14Q6ZU15 432 aa18.9■□□□□ 0.62
CDKN1B-201ENST00000228872 RHOT2Q8IXI1 618 aa18.9■□□□□ 0.62
CDKN1B-201ENST00000228872 DRAXINQ8NBI3 349 aaPredicted RBP18.9■□□□□ 0.62
CDKN1B-201ENST00000228872 SH3TC2Q8TF17 1288 aa18.9■□□□□ 0.62
CDKN1B-201ENST00000228872 FAM136AQ96C01 138 aa18.9■□□□□ 0.62
CDKN1B-201ENST00000228872 SLC7A6OSQ96CW6 309 aaPredicted RBP18.9■□□□□ 0.62
CDKN1B-201ENST00000228872 ZDHHC15Q96MV8 337 aa18.9■□□□□ 0.62
CDKN1B-201ENST00000228872 GPR88Q9GZN0 384 aa18.9■□□□□ 0.62
CDKN1B-201ENST00000228872 KIAA1683Q9H0B3 1180 aa18.9■□□□□ 0.62
CDKN1B-201ENST00000228872 ASTN1O14525 1302 aa18.9■□□□□ 0.62
CDKN1B-201ENST00000228872 TP73O15350 636 aa18.9■□□□□ 0.62
CDKN1B-201ENST00000228872 R3HDM1Q15032 1099 aaKnown RBP18.9■□□□□ 0.62
CDKN1B-201ENST00000228872 IRGCQ6NXR0 463 aa18.9■□□□□ 0.62
CDKN1B-201ENST00000228872 MIGA2Q7L4E1 593 aa18.9■□□□□ 0.62
CDKN1B-201ENST00000228872 RBBP8NLQ8NC74 664 aaPredicted RBP18.9■□□□□ 0.62
CDKN1B-201ENST00000228872 SGIP1Q9BQI5 828 aa18.9■□□□□ 0.62
CDKN1B-201ENST00000228872 TYW1Q9NV66 732 aaKnown RBP18.9■□□□□ 0.62
CDKN1B-201ENST00000228872 EPHB2P29323 1055 aa18.89■□□□□ 0.62
CDKN1B-201ENST00000228872 CRKP46108 304 aa18.89■□□□□ 0.62
CDKN1B-201ENST00000228872 SCNN1DP51172 638 aa18.89■□□□□ 0.62
CDKN1B-201ENST00000228872 GIT2Q14161 759 aa18.89■□□□□ 0.62
CDKN1B-201ENST00000228872 RNF220Q5VTB9 566 aa18.89■□□□□ 0.62
CDKN1B-201ENST00000228872 OR52E8Q6IFG1 317 aa18.89■□□□□ 0.62
CDKN1B-201ENST00000228872 IFT43Q96FT9 208 aa18.89■□□□□ 0.62
CDKN1B-201ENST00000228872 POP1Q99575 1024 aaKnown RBP18.89■□□□□ 0.62
CDKN1B-201ENST00000228872 IRAK4Q9NWZ3 460 aa18.89■□□□□ 0.62
CDKN1B-201ENST00000228872 PCDHB13Q9Y5F0 798 aa18.89■□□□□ 0.62
CDKN1B-201ENST00000228872 USH1CQ9Y6N9 552 aa18.89■□□□□ 0.62
CDKN1B-201ENST00000228872 ADGRA3Q8IWK6 1321 aa18.89■□□□□ 0.61
CDKN1B-201ENST00000228872 YDJCA8MPS7 323 aa18.89■□□□□ 0.61
CDKN1B-201ENST00000228872 T-ENOLP0DO92 83 aa18.89■□□□□ 0.61
CDKN1B-201ENST00000228872 PYGMP11217 842 aa18.89■□□□□ 0.61
CDKN1B-201ENST00000228872 RPL13P26373 211 aaKnown RBP18.89■□□□□ 0.61
CDKN1B-201ENST00000228872 SIX1Q15475 284 aaPredicted RBP18.89■□□□□ 0.61
CDKN1B-201ENST00000228872 MUM1Q2TAK8 710 aa18.89■□□□□ 0.61
CDKN1B-201ENST00000228872 APOBEC3HQ6NTF7 200 aaKnown RBP18.89■□□□□ 0.61
CDKN1B-201ENST00000228872 RHBDF2Q6PJF5 856 aa18.89■□□□□ 0.61
CDKN1B-201ENST00000228872 PPP1R21Q6ZMI0 780 aa18.89■□□□□ 0.61
CDKN1B-201ENST00000228872 ZNF333Q96JL9 665 aa18.89■□□□□ 0.61
CDKN1B-201ENST00000228872 LRRC37BQ96QE4 947 aa18.89■□□□□ 0.61
CDKN1B-201ENST00000228872 TRIM4Q9C037 500 aa18.89■□□□□ 0.61
CDKN1B-201ENST00000228872 VCXQ9H320 206 aa18.89■□□□□ 0.61
CDKN1B-201ENST00000228872 DENND2DQ9H6A0 471 aaPredicted RBP18.89■□□□□ 0.61
CDKN1B-201ENST00000228872 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.89■□□□□ 0.61
CDKN1B-201ENST00000228872 CTTNBP2NLQ9P2B4 639 aa18.89■□□□□ 0.61
CDKN1B-201ENST00000228872 MTUS1Q9ULD2 1270 aa18.89■□□□□ 0.61
CDKN1B-201ENST00000228872 USP20Q9Y2K6 914 aa18.89■□□□□ 0.61
CDKN1B-201ENST00000228872 STARD13Q9Y3M8 1113 aa18.89■□□□□ 0.61
CDKN1B-201ENST00000228872 FRMPD2Q68DX3 1309 aaPredicted RBP18.89■□□□□ 0.61
CDKN1B-201ENST00000228872 CLIC2O15247 247 aa18.88■□□□□ 0.61
CDKN1B-201ENST00000228872 MED24O75448 989 aa18.88■□□□□ 0.61
CDKN1B-201ENST00000228872 ECEL1O95672 775 aa18.88■□□□□ 0.61
CDKN1B-201ENST00000228872 TTC4O95801 387 aa18.88■□□□□ 0.61
CDKN1B-201ENST00000228872 SLC13A5Q86YT5 568 aaPredicted RBP18.88■□□□□ 0.61
CDKN1B-201ENST00000228872 SRRM1Q8IYB3 904 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms