RNA–Protein interactions for RNA: YPR029C

APL4, Transcript of Gamma-adaptin, yeast

Gene APL4, Length 2,499 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APL4	YPR029C	STP1	Q00947	519 aa		3.37	□□□□□ -1.87
APL4	YPR029C	CCE1	Q03702	353 aa		3.37	□□□□□ -1.87
APL4	YPR029C	THI72	Q08579	599 aa		3.37	□□□□□ -1.87
APL4	YPR029C	RPS10A	Q08745	105 aa	Predicted RBP	3.37	□□□□□ -1.87
APL4	YPR029C	RRS1	Q08746	203 aa	Known RBP	3.37	□□□□□ -1.87
APL4	YPR029C	MET32	Q12041	191 aa		3.37	□□□□□ -1.87
APL4	YPR029C	NCE102	Q12207	173 aa	RIP-Chip data	3.37	□□□□□ -1.87	not detected
APL4	YPR029C	YLR419W	Q06698	1435 aa	Known RBP	3.37	□□□□□ -1.87
APL4	YPR029C	THO2	P53552	1597 aa	Known RBP	3.37	□□□□□ -1.87
APL4	YPR029C	MET2	P08465	486 aa		3.37	□□□□□ -1.87
APL4	YPR029C	PET9	P18239	318 aa	Known RBP	3.37	□□□□□ -1.87
APL4	YPR029C	MRPS28	P21771	286 aa		3.37	□□□□□ -1.87
APL4	YPR029C	TKL1	P23254	680 aa	Known RBP	3.37	□□□□□ -1.87
APL4	YPR029C	TRX3	P25372	127 aa		3.37	□□□□□ -1.87
APL4	YPR029C	YBR241C	P38142	488 aa		3.37	□□□□□ -1.87
APL4	YPR029C	NDT80	P38830	627 aa		3.37	□□□□□ -1.87
APL4	YPR029C	FAA2	P39518	744 aa		3.37	□□□□□ -1.87
APL4	YPR029C	AIM2	P39721	246 aa		3.37	□□□□□ -1.87
APL4	YPR029C	GLE2	P40066	365 aa		3.37	□□□□□ -1.87
APL4	YPR029C	MOB2	P43563	287 aa		3.37	□□□□□ -1.87
APL4	YPR029C	MNN10	P50108	393 aa	Known RBP	3.37	□□□□□ -1.87
APL4	YPR029C	DUG3	P53871	357 aa		3.37	□□□□□ -1.87
APL4	YPR029C	NAM8	Q00539	523 aa	Known RBP	3.37	□□□□□ -1.87
APL4	YPR029C	YVH1	Q02256	364 aa	Known RBP	3.37	□□□□□ -1.87
APL4	YPR029C	NKP2	Q06162	153 aa		3.37	□□□□□ -1.87
APL4	YPR029C	HRD1	Q08109	551 aa		3.37	□□□□□ -1.87
APL4	YPR029C	YPL257W	Q08974	193 aa		3.37	□□□□□ -1.87
APL4	YPR029C	SUT2	Q12286	268 aa		3.37	□□□□□ -1.87
APL4	YPR029C	RIB2	Q12362	591 aa	Known RBP	3.37	□□□□□ -1.87
APL4	YPR029C	YDL085C-A	Q3E7B7	68 aa	Known RBP	3.37	□□□□□ -1.87
APL4	YPR029C	BI3	Q9ZZW7	517 aa		3.37	□□□□□ -1.87
APL4	YPR029C	AI3	P03877	415 aa		3.36	□□□□□ -1.87
APL4	YPR029C	HEM2	P05373	342 aa		3.36	□□□□□ -1.87
APL4	YPR029C	PBI2	P0CT04	75 aa	Known RBP	3.36	□□□□□ -1.87
APL4	YPR029C	UGX2	P32772	223 aa		3.36	□□□□□ -1.87
APL4	YPR029C	MSN2	P33748	704 aa		3.36	□□□□□ -1.87
APL4	YPR029C	ECM33	P38248	429 aa	Known RBP	3.36	□□□□□ -1.87
APL4	YPR029C	PRE3	P38624	215 aa		3.36	□□□□□ -1.87
APL4	YPR029C	LEU5	P38702	357 aa		3.36	□□□□□ -1.87
APL4	YPR029C	RPP1	P38786	293 aa		3.36	□□□□□ -1.87
APL4	YPR029C	YMR144W	P40214	342 aa	Known RBP	3.36	□□□□□ -1.87
APL4	YPR029C	GVP36	P40531	326 aa	Known RBP	3.36	□□□□□ -1.87
APL4	YPR029C	ASN1	P49089	572 aa	Known RBP	3.36	□□□□□ -1.87
APL4	YPR029C	MRM2	P53123	320 aa		3.36	□□□□□ -1.87
APL4	YPR029C	MTM1	P53320	366 aa		3.36	□□□□□ -1.87
APL4	YPR029C	HST3	P53687	447 aa		3.36	□□□□□ -1.87
APL4	YPR029C	TIM8	P57744	87 aa		3.36	□□□□□ -1.87
APL4	YPR029C	SNU56	Q03782	492 aa	Known RBP	3.36	□□□□□ -1.87
APL4	YPR029C	YDR249C	Q03787	373 aa		3.36	□□□□□ -1.87
APL4	YPR029C	YDR387C	Q04162	555 aa		3.36	□□□□□ -1.87
APL4	YPR029C	YMR027W	Q04371	470 aa		3.36	□□□□□ -1.87
APL4	YPR029C	YML053C	Q04978	212 aa		3.36	□□□□□ -1.87
APL4	YPR029C	TDA6	Q06466	467 aa		3.36	□□□□□ -1.87
APL4	YPR029C	YOL024W	Q08172	172 aa		3.36	□□□□□ -1.87
APL4	YPR029C	RIB3	Q99258	208 aa		3.36	□□□□□ -1.87
APL4	YPR029C	MON2	P48563	1636 aa	Predicted RBP	3.36	□□□□□ -1.87
APL4	YPR029C	SAL1	D6W196	494 aa		3.36	□□□□□ -1.87
APL4	YPR029C	CYC3	P06182	269 aa		3.36	□□□□□ -1.87
APL4	YPR029C	YOL163W	P0CF20	169 aa		3.36	□□□□□ -1.87
APL4	YPR029C	SCO1	P23833	295 aa		3.36	□□□□□ -1.87
APL4	YPR029C	MKK1	P32490	508 aa		3.36	□□□□□ -1.87
APL4	YPR029C	AIM26	P32858	118 aa		3.36	□□□□□ -1.87
APL4	YPR029C	LST4	P34239	828 aa		3.36	□□□□□ -1.87
APL4	YPR029C	THI80	P35202	319 aa		3.36	□□□□□ -1.87
APL4	YPR029C	ROT2	P38138	954 aa		3.36	□□□□□ -1.87
APL4	YPR029C	YBR285W	P38354	144 aa		3.36	□□□□□ -1.87
APL4	YPR029C	YHR127W	P38833	243 aa	Known RBP	3.36	□□□□□ -1.87
APL4	YPR029C	LSM4	P40070	187 aa	Known RBP	3.36	□□□□□ -1.87
APL4	YPR029C	ARG2	P40360	574 aa		3.36	□□□□□ -1.87
APL4	YPR029C	SER33	P40510	469 aa		3.36	□□□□□ -1.87
APL4	YPR029C	YFL040W	P43562	540 aa		3.36	□□□□□ -1.87
APL4	YPR029C	KEG1	P43614	200 aa		3.36	□□□□□ -1.87
APL4	YPR029C	TRM9	P49957	279 aa		3.36	□□□□□ -1.87
APL4	YPR029C	MST27	P53176	234 aa		3.36	□□□□□ -1.87
APL4	YPR029C	CDC14	Q00684	551 aa		3.36	□□□□□ -1.87
APL4	YPR029C	SLU7	Q02775	382 aa	Known RBP	3.36	□□□□□ -1.87
APL4	YPR029C	YPL113C	Q02961	396 aa		3.36	□□□□□ -1.87
APL4	YPR029C	YDR124W	Q04608	324 aa		3.36	□□□□□ -1.87
APL4	YPR029C	YPR098C	Q06089	161 aa		3.36	□□□□□ -1.87
APL4	YPR029C	SFH1	Q06168	426 aa		3.36	□□□□□ -1.87
APL4	YPR029C	MEX67	Q99257	599 aa	Known RBP	3.36	□□□□□ -1.87
APL4	YPR029C	BUD4	P47136	1447 aa		3.36	□□□□□ -1.87
APL4	YPR029C	SEC14	P24280	304 aa	Known RBP	3.35	□□□□□ -1.87
APL4	YPR029C	ARO7	P32178	256 aa		3.35	□□□□□ -1.87
APL4	YPR029C	HYM1	P32464	399 aa		3.35	□□□□□ -1.87
APL4	YPR029C	UTR4	P32626	227 aa		3.35	□□□□□ -1.87
APL4	YPR029C	TOA2	P32774	122 aa		3.35	□□□□□ -1.87
APL4	YPR029C	ASH1	P34233	588 aa		3.35	□□□□□ -1.87
APL4	YPR029C	YKL075C	P36083	450 aa		3.35	□□□□□ -1.87
APL4	YPR029C	SRL3	P36167	246 aa		3.35	□□□□□ -1.87
APL4	YPR029C	SDS24	P38314	527 aa		3.35	□□□□□ -1.87
APL4	YPR029C	SLM6	P38343	150 aa		3.35	□□□□□ -1.87
APL4	YPR029C	SAP30	P38429	201 aa		3.35	□□□□□ -1.87
APL4	YPR029C	YIL067C	P40514	678 aa		3.35	□□□□□ -1.87
APL4	YPR029C	GLC8	P41818	229 aa		3.35	□□□□□ -1.87
APL4	YPR029C	PSA1	P41940	361 aa	Known RBP	3.35	□□□□□ -1.87
APL4	YPR029C	ERJ5	P43613	295 aa	Predicted RBP	3.35	□□□□□ -1.87
APL4	YPR029C	RPS10B	P46784	105 aa	Known RBP	3.35	□□□□□ -1.87
APL4	YPR029C	GPI15	P53961	229 aa		3.35	□□□□□ -1.87
APL4	YPR029C	TRM44	Q02648	567 aa	Known RBP	3.35	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 29.5 ms