RNA–Protein interactions for RNA: YPL030W

TRM44, Transcript of tRNA(Ser) Um(44) 2'-O-methyltransferase, yeast

Gene TRM44, Length 1,704 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM44	YPL030W	IRC8	P47046	822 aa		4.11	□□□□□ -1.75
TRM44	YPL030W	MCM22	P47167	239 aa		4.11	□□□□□ -1.75
TRM44	YPL030W	SUT1	P53032	299 aa	Known RBP	4.11	□□□□□ -1.75
TRM44	YPL030W	TYW3	P53177	273 aa		4.11	□□□□□ -1.75
TRM44	YPL030W	YMR160W	Q03823	816 aa		4.11	□□□□□ -1.75
TRM44	YPL030W	YLR346C	Q06139	101 aa		4.11	□□□□□ -1.75
TRM44	YPL030W	YPL245W	Q12179	454 aa	Known RBP	4.11	□□□□□ -1.75
TRM44	YPL030W	FRE8	Q12209	686 aa		4.11	□□□□□ -1.75
TRM44	YPL030W	YCT1	Q12235	531 aa		4.11	□□□□□ -1.75
TRM44	YPL030W	AHA1	Q12449	350 aa	Known RBP	4.11	□□□□□ -1.75
TRM44	YPL030W	RAD52	P06778	471 aa	Known RBP	4.1	□□□□□ -1.75
TRM44	YPL030W	PUT1	P09368	476 aa		4.1	□□□□□ -1.75
TRM44	YPL030W	RPB10	P22139	70 aa		4.1	□□□□□ -1.75
TRM44	YPL030W	YSR3	P23501	404 aa		4.1	□□□□□ -1.75
TRM44	YPL030W	UBC8	P28263	218 aa		4.1	□□□□□ -1.75
TRM44	YPL030W	YEF1	P32622	495 aa		4.1	□□□□□ -1.75
TRM44	YPL030W	FMT1	P32785	401 aa		4.1	□□□□□ -1.75
TRM44	YPL030W	MRPL28	P36527	147 aa		4.1	□□□□□ -1.75
TRM44	YPL030W	MRPL16	P38064	232 aa		4.1	□□□□□ -1.75
TRM44	YPL030W	CTP1	P38152	299 aa		4.1	□□□□□ -1.75
TRM44	YPL030W	CKB2	P38930	258 aa		4.1	□□□□□ -1.75
TRM44	YPL030W	END3	P39013	349 aa		4.1	□□□□□ -1.75
TRM44	YPL030W	SHO1	P40073	367 aa		4.1	□□□□□ -1.75
TRM44	YPL030W	PTR3	P43606	678 aa		4.1	□□□□□ -1.75
TRM44	YPL030W	FAR3	P46671	204 aa		4.1	□□□□□ -1.75
TRM44	YPL030W	DIA3	P52290	468 aa		4.1	□□□□□ -1.75
TRM44	YPL030W	KTR5	P53966	522 aa	Predicted RBP	4.1	□□□□□ -1.75
TRM44	YPL030W	GPD1	Q00055	391 aa	Known RBP	4.1	□□□□□ -1.75
TRM44	YPL030W	RPS15	Q01855	142 aa	Known RBP	4.1	□□□□□ -1.75
TRM44	YPL030W	AIM34	Q03673	198 aa		4.1	□□□□□ -1.75
TRM44	YPL030W	PPN1	Q04119	674 aa		4.1	□□□□□ -1.75
TRM44	YPL030W	AIM33	Q04516	312 aa		4.1	□□□□□ -1.75
TRM44	YPL030W	DAL4	Q04895	635 aa		4.1	□□□□□ -1.75
TRM44	YPL030W	INP54	Q08227	384 aa	Known RBP	4.1	□□□□□ -1.75
TRM44	YPL030W	ALG6	Q12001	544 aa	Known RBP	4.1	□□□□□ -1.75
TRM44	YPL030W	PST1	Q12355	444 aa		4.1	□□□□□ -1.75
TRM44	YPL030W	RKM5	Q12367	367 aa		4.1	□□□□□ -1.75
TRM44	YPL030W	GEP5	Q12393	293 aa		4.1	□□□□□ -1.75
TRM44	YPL030W	VMA9	Q3E7B6	73 aa		4.1	□□□□□ -1.75
TRM44	YPL030W	TFB5	Q3E7C1	72 aa	Predicted RBP	4.1	□□□□□ -1.75
TRM44	YPL030W	VPS63	O13549	108 aa		4.09	□□□□□ -1.75
TRM44	YPL030W	YLR462W	O13556	202 aa		4.09	□□□□□ -1.75
TRM44	YPL030W	COX2	P00410	251 aa		4.09	□□□□□ -1.75
TRM44	YPL030W	SUC2	P00724	532 aa		4.09	□□□□□ -1.75
TRM44	YPL030W	CYC3	P06182	269 aa		4.09	□□□□□ -1.75
TRM44	YPL030W	CPR2	P23285	205 aa		4.09	□□□□□ -1.75
TRM44	YPL030W	ADH7	P25377	361 aa		4.09	□□□□□ -1.75
TRM44	YPL030W	VMA3	P25515	160 aa		4.09	□□□□□ -1.75
TRM44	YPL030W	YCL068C	P25593	260 aa		4.09	□□□□□ -1.75
TRM44	YPL030W	OMA1	P36163	345 aa		4.09	□□□□□ -1.75
TRM44	YPL030W	APL3	P38065	1025 aa		4.09	□□□□□ -1.75
TRM44	YPL030W	EHT1	P38295	451 aa		4.09	□□□□□ -1.75
TRM44	YPL030W	YHL049C	P38722	271 aa		4.09	□□□□□ -1.75
TRM44	YPL030W	YPT35	P38815	214 aa	Known RBP	4.09	□□□□□ -1.75
TRM44	YPL030W	YEL075C	P39972	122 aa		4.09	□□□□□ -1.75
TRM44	YPL030W	NPP2	P39997	493 aa		4.09	□□□□□ -1.75
TRM44	YPL030W	PRE6	P40303	254 aa	Known RBP	4.09	□□□□□ -1.75
TRM44	YPL030W	SDP1	P40479	209 aa		4.09	□□□□□ -1.75
TRM44	YPL030W	ERJ5	P43613	295 aa	Predicted RBP	4.09	□□□□□ -1.75
TRM44	YPL030W	TIM13	P53299	105 aa		4.09	□□□□□ -1.75
TRM44	YPL030W	DUS1	P53759	423 aa	Known RBP	4.09	□□□□□ -1.75
TRM44	YPL030W	LSM7	P53905	115 aa	Known RBP	4.09	□□□□□ -1.75
TRM44	YPL030W	YNL095C	P53932	642 aa		4.09	□□□□□ -1.75
TRM44	YPL030W	YNL092W	P53934	400 aa		4.09	□□□□□ -1.75
TRM44	YPL030W	YLR460C	P54007	376 aa		4.09	□□□□□ -1.75
TRM44	YPL030W	TPS1	Q00764	495 aa	Known RBP	4.09	□□□□□ -1.75
TRM44	YPL030W	DIG1	Q03063	452 aa	Known RBP	4.09	□□□□□ -1.75
TRM44	YPL030W	RSM10	Q03201	203 aa		4.09	□□□□□ -1.75
TRM44	YPL030W	RCE1	Q03530	315 aa		4.09	□□□□□ -1.75
TRM44	YPL030W	SEC13	Q04491	297 aa	Known RBP	4.09	□□□□□ -1.75
TRM44	YPL030W	SEN15	Q04675	128 aa		4.09	□□□□□ -1.75
TRM44	YPL030W	YMR074C	Q04773	145 aa		4.09	□□□□□ -1.75
TRM44	YPL030W	BNA5	Q05979	453 aa		4.09	□□□□□ -1.75
TRM44	YPL030W	PIN3	Q06449	215 aa		4.09	□□□□□ -1.75
TRM44	YPL030W	PAM18	Q07914	168 aa		4.09	□□□□□ -1.75
TRM44	YPL030W	ENV7	Q12003	364 aa		4.09	□□□□□ -1.75
TRM44	YPL030W	YLL058W	Q12198	575 aa		4.09	□□□□□ -1.75
TRM44	YPL030W	BI3	Q9ZZW7	517 aa		4.09	□□□□□ -1.75
TRM44	YPL030W	CYC1	P00044	109 aa	Predicted RBP	4.09	□□□□□ -1.76
TRM44	YPL030W	AAC1	P04710	309 aa		4.09	□□□□□ -1.76
TRM44	YPL030W	ERG6	P25087	383 aa	Known RBP	4.09	□□□□□ -1.76
TRM44	YPL030W	YCR015C	P25616	317 aa		4.09	□□□□□ -1.76
TRM44	YPL030W	TMT1	P32643	299 aa		4.09	□□□□□ -1.76
TRM44	YPL030W	ZRT3	P34240	503 aa		4.09	□□□□□ -1.76
TRM44	YPL030W	YOR062C	P36025	268 aa		4.09	□□□□□ -1.76
TRM44	YPL030W	SDH4	P37298	181 aa		4.09	□□□□□ -1.76
TRM44	YPL030W	RIB1	P38066	345 aa		4.09	□□□□□ -1.76
TRM44	YPL030W	YBR053C	P38235	358 aa		4.09	□□□□□ -1.76
TRM44	YPL030W	DOG1	P38774	246 aa		4.09	□□□□□ -1.76
TRM44	YPL030W	HAT2	P39984	401 aa		4.09	□□□□□ -1.76
TRM44	YPL030W	BMT5	P40493	336 aa		4.09	□□□□□ -1.76
TRM44	YPL030W	SYS1	P41544	203 aa		4.09	□□□□□ -1.76
TRM44	YPL030W	DSD1	P53095	428 aa		4.09	□□□□□ -1.76
TRM44	YPL030W	ERV29	P53337	310 aa		4.09	□□□□□ -1.76
TRM44	YPL030W	ABF2	Q02486	183 aa		4.09	□□□□□ -1.76
TRM44	YPL030W	HPT1	Q04178	221 aa	Known RBP	4.09	□□□□□ -1.76
TRM44	YPL030W	ACM1	Q08981	209 aa		4.09	□□□□□ -1.76
TRM44	YPL030W	RDL1	Q12305	139 aa	Known RBP	4.09	□□□□□ -1.76
TRM44	YPL030W	PST2	Q12335	198 aa	Known RBP	4.09	□□□□□ -1.76
TRM44	YPL030W	CTF3	Q12748	733 aa		4.09	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 85.7 ms