RNA–Protein interactions for RNA: YMR088C

VBA1, Transcript of Permease of basic amino acids in the vacuolar membrane, yeastyeast

Gene VBA1, Length 1,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VBA1YMR088C DAD3P69850 94 aa5.08□□□□□ -1.6
VBA1YMR088C YLR407WQ06070 228 aa5.08□□□□□ -1.6
VBA1YMR088C YLR446WQ06204 433 aa5.08□□□□□ -1.6
VBA1YMR088C YPR027CQ12079 277 aa5.08□□□□□ -1.6
VBA1YMR088C MDM32Q12171 622 aa5.08□□□□□ -1.6
VBA1YMR088C PST2Q12335 198 aaKnown RBP5.08□□□□□ -1.6
VBA1YMR088C NDJ1Q12366 352 aa5.08□□□□□ -1.6
VBA1YMR088C RMD5Q12508 421 aa5.08□□□□□ -1.6
VBA1YMR088C BAR1P12630 587 aa5.07□□□□□ -1.6
VBA1YMR088C SAM2P19358 384 aaKnown RBP5.07□□□□□ -1.6
VBA1YMR088C ARP2P32381 391 aaKnown RBP5.07□□□□□ -1.6
VBA1YMR088C MRP49P32388 137 aa5.07□□□□□ -1.6
VBA1YMR088C TOD6P34219 525 aa5.07□□□□□ -1.6
VBA1YMR088C OMA1P36163 345 aa5.07□□□□□ -1.6
VBA1YMR088C FLR1P38124 548 aa5.07□□□□□ -1.6
VBA1YMR088C NSG1P38837 291 aa5.07□□□□□ -1.6
VBA1YMR088C IKI1P38874 309 aa5.07□□□□□ -1.6
VBA1YMR088C PTI1P39927 425 aaPredicted RBP5.07□□□□□ -1.6
VBA1YMR088C YEA6P39953 335 aa5.07□□□□□ -1.6
VBA1YMR088C IME4P41833 600 aa5.07□□□□□ -1.6
VBA1YMR088C GAT1P43574 510 aa5.07□□□□□ -1.6
VBA1YMR088C CHA4P43634 648 aa5.07□□□□□ -1.6
VBA1YMR088C GWT1P47026 490 aa5.07□□□□□ -1.6
VBA1YMR088C YJR012CP47087 207 aa5.07□□□□□ -1.6
VBA1YMR088C NUP57P48837 541 aa5.07□□□□□ -1.6
VBA1YMR088C DUS1P53759 423 aaKnown RBP5.07□□□□□ -1.6
VBA1YMR088C SMX3P54999 86 aaPredicted RBP5.07□□□□□ -1.6
VBA1YMR088C VPS28Q02767 242 aa5.07□□□□□ -1.6
VBA1YMR088C DIG1Q03063 452 aaKnown RBP5.07□□□□□ -1.6
VBA1YMR088C RNH202Q05635 350 aa5.07□□□□□ -1.6
VBA1YMR088C RDL1Q12305 139 aaKnown RBP5.07□□□□□ -1.6
VBA1YMR088C YKL033W-AQ86ZR7 236 aa5.07□□□□□ -1.6
VBA1YMR088C VAR1P02381 398 aa5.06□□□□□ -1.6
VBA1YMR088C HAP3P13434 144 aa5.06□□□□□ -1.6
VBA1YMR088C CAP2P13517 287 aa5.06□□□□□ -1.6
VBA1YMR088C DAL82P21705 255 aa5.06□□□□□ -1.6
VBA1YMR088C FRE1P32791 686 aa5.06□□□□□ -1.6
VBA1YMR088C HIS7P33734 552 aaKnown RBP5.06□□□□□ -1.6
VBA1YMR088C SHE2P36068 246 aaKnown RBP RIP-Chip data5.06□□□□□ -1.6not detected
VBA1YMR088C YKR051WP36142 418 aa5.06□□□□□ -1.6
VBA1YMR088C FLO10P36170 1169 aa5.06□□□□□ -1.6
VBA1YMR088C APL3P38065 1025 aa5.06□□□□□ -1.6
VBA1YMR088C DAN1P47178 298 aa5.06□□□□□ -1.6
VBA1YMR088C JAC1P53193 184 aa5.06□□□□□ -1.6
VBA1YMR088C YGR045CP53229 120 aa5.06□□□□□ -1.6
VBA1YMR088C TIM13P53299 105 aa5.06□□□□□ -1.6
VBA1YMR088C CAB5Q03941 241 aa5.06□□□□□ -1.6
VBA1YMR088C SEN15Q04675 128 aa5.06□□□□□ -1.6
VBA1YMR088C ADH6Q04894 360 aaKnown RBP5.06□□□□□ -1.6
VBA1YMR088C SEI1Q06058 285 aa5.06□□□□□ -1.6
VBA1YMR088C IPK1Q06667 281 aa5.06□□□□□ -1.6
VBA1YMR088C TY1A-NL1Q12391 440 aaKnown RBP5.06□□□□□ -1.6
VBA1YMR088C YDL199CQ12407 687 aa5.06□□□□□ -1.6
VBA1YMR088C RDI1Q12434 202 aa5.06□□□□□ -1.6
VBA1YMR088C PDR15Q04182 1529 aaKnown RBP5.06□□□□□ -1.6
VBA1YMR088C GCY1P14065 312 aaKnown RBP RIP-Chip data5.05□□□□□ -1.6not detected
VBA1YMR088C CPT1P17898 393 aa5.05□□□□□ -1.6
VBA1YMR088C EXO70P19658 623 aa5.05□□□□□ -1.6
VBA1YMR088C SAT4P25333 603 aaKnown RBP5.05□□□□□ -1.6
VBA1YMR088C ELO2P25358 347 aa5.05□□□□□ -1.6
VBA1YMR088C NTH1P32356 751 aa5.05□□□□□ -1.6
VBA1YMR088C FRE2P36033 711 aa5.05□□□□□ -1.6
VBA1YMR088C YKR075CP36155 307 aa5.05□□□□□ -1.6
VBA1YMR088C PRS4P38063 326 aaPredicted RBP5.05□□□□□ -1.6
VBA1YMR088C PHO90P39535 881 aa5.05□□□□□ -1.6
VBA1YMR088C COA1P40452 197 aa5.05□□□□□ -1.6
VBA1YMR088C ASN1P49089 572 aaKnown RBP5.05□□□□□ -1.6
VBA1YMR088C MGA1P53050 456 aa5.05□□□□□ -1.6
VBA1YMR088C STR3P53101 465 aaKnown RBP5.05□□□□□ -1.6
VBA1YMR088C ECM9Q02202 377 aa5.05□□□□□ -1.6
VBA1YMR088C SUE1Q06524 206 aa5.05□□□□□ -1.6
VBA1YMR088C AIM45Q12480 344 aaKnown RBP5.05□□□□□ -1.6
VBA1YMR088C PCC1Q3E833 88 aa5.05□□□□□ -1.6
VBA1YMR088C RIB3Q99258 208 aa5.05□□□□□ -1.6
VBA1YMR088C HRP1Q99383 534 aaKnown RBP5.05□□□□□ -1.6
VBA1YMR088C TY3B-IQ7LHG5 1498 aaKnown RBP5.05□□□□□ -1.6
VBA1YMR088C YDR157WA0A023PZE8 133 aa5.05□□□□□ -1.6
VBA1YMR088C CYC7P00045 113 aa5.05□□□□□ -1.6
VBA1YMR088C RPS16AP0CX51 143 aaKnown RBP5.05□□□□□ -1.6
VBA1YMR088C RPS16BP0CX52 143 aaKnown RBP5.05□□□□□ -1.6
VBA1YMR088C POX1P13711 748 aa5.05□□□□□ -1.6
VBA1YMR088C YMR31P19955 123 aa5.05□□□□□ -1.6
VBA1YMR088C BET2P20133 325 aa5.05□□□□□ -1.6
VBA1YMR088C PPH21P23594 369 aa5.05□□□□□ -1.6
VBA1YMR088C SPO14P36126 1683 aa5.05□□□□□ -1.6
VBA1YMR088C ROT2P38138 954 aa5.05□□□□□ -1.6
VBA1YMR088C VID24P38263 362 aa5.05□□□□□ -1.6
VBA1YMR088C YBR285WP38354 144 aa5.05□□□□□ -1.6
VBA1YMR088C RRP4P38792 359 aaKnown RBP5.05□□□□□ -1.6
VBA1YMR088C YFL064CP43540 174 aa5.05□□□□□ -1.6
VBA1YMR088C CIN2P46670 268 aa5.05□□□□□ -1.6
VBA1YMR088C DPB11P47027 764 aaPredicted RBP5.05□□□□□ -1.6
VBA1YMR088C MDM34P53083 459 aa5.05□□□□□ -1.6
VBA1YMR088C POP6P53218 158 aa5.05□□□□□ -1.6
VBA1YMR088C LST7P53237 242 aa5.05□□□□□ -1.6
VBA1YMR088C YGR151CP53287 111 aa5.05□□□□□ -1.6
VBA1YMR088C NCE103P53615 221 aa5.05□□□□□ -1.6
VBA1YMR088C NSG2P53898 299 aa5.05□□□□□ -1.6
VBA1YMR088C ASI3P53983 676 aa5.05□□□□□ -1.6
VBA1YMR088C UBP16Q02863 499 aa5.05□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms