RNA–Protein interactions for RNA: YML029W

USA1, Transcript of Scaffold subunit of the Hrd1p ubiquitin ligase, yeastyeast

Gene USA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USA1YML029W RPL24BP24000 155 aaKnown RBP3.44□□□□□ -1.86
USA1YML029W AHC2P25649 128 aa3.44□□□□□ -1.86
USA1YML029W ARO7P32178 256 aa3.44□□□□□ -1.86
USA1YML029W MDH3P32419 343 aaKnown RBP RIP-Chip data3.44□□□□□ -1.86not detected
USA1YML029W KRE6P32486 720 aa3.44□□□□□ -1.86
USA1YML029W SRP102P36057 244 aaPredicted RBP3.44□□□□□ -1.86
USA1YML029W FAT1P38225 669 aa3.44□□□□□ -1.86
USA1YML029W YHL037CP38733 133 aa3.44□□□□□ -1.86
USA1YML029W SHO1P40073 367 aa3.44□□□□□ -1.86
USA1YML029W YMR144WP40214 342 aaKnown RBP3.44□□□□□ -1.86
USA1YML029W PFS2P42841 465 aaKnown RBP3.44□□□□□ -1.86
USA1YML029W PRY1P47032 299 aa3.44□□□□□ -1.86
USA1YML029W SCW11P53189 542 aa3.44□□□□□ -1.86
USA1YML029W YAP1802P53309 568 aa3.44□□□□□ -1.86
USA1YML029W DIG2Q03373 323 aaKnown RBP3.44□□□□□ -1.86
USA1YML029W AIM36Q03798 255 aa3.44□□□□□ -1.86
USA1YML029W MGR3Q04472 501 aa3.44□□□□□ -1.86
USA1YML029W TAZ1Q06510 381 aa3.44□□□□□ -1.86
USA1YML029W BRE4Q07660 1125 aa3.44□□□□□ -1.86
USA1YML029W MIM1Q08176 113 aa3.44□□□□□ -1.86
USA1YML029W HRT1Q08273 121 aa3.44□□□□□ -1.86
USA1YML029W ENV7Q12003 364 aa3.44□□□□□ -1.86
USA1YML029W IES3Q12345 250 aa3.44□□□□□ -1.86
USA1YML029W GIT1P25346 518 aa3.43□□□□□ -1.86
USA1YML029W YBR063CP38083 404 aa3.43□□□□□ -1.86
USA1YML029W MAL32P38158 584 aa3.43□□□□□ -1.86
USA1YML029W AIM3P38266 947 aaKnown RBP3.43□□□□□ -1.86
USA1YML029W FMC1P40491 155 aa3.43□□□□□ -1.86
USA1YML029W AVT7P40501 490 aa3.43□□□□□ -1.86
USA1YML029W AAD14P42884 376 aa3.43□□□□□ -1.86
USA1YML029W SFH5P47008 294 aa3.43□□□□□ -1.86
USA1YML029W YAE1P47118 141 aaPredicted RBP3.43□□□□□ -1.86
USA1YML029W RMD9P53140 646 aaKnown RBP3.43□□□□□ -1.86
USA1YML029W MAL12P53341 584 aa3.43□□□□□ -1.86
USA1YML029W ACS1Q01574 713 aa3.43□□□□□ -1.86
USA1YML029W YDR391CQ04170 232 aa3.43□□□□□ -1.86
USA1YML029W FRE3Q08905 711 aa3.43□□□□□ -1.86
USA1YML029W FRE5Q08908 694 aa3.43□□□□□ -1.86
USA1YML029W RCN2Q12044 265 aa3.43□□□□□ -1.86
USA1YML029W MSH5Q12175 901 aa3.43□□□□□ -1.86
USA1YML029W YRM1Q12340 786 aa3.43□□□□□ -1.86
USA1YML029W RPL11AP0C0W9 174 aaKnown RBP3.43□□□□□ -1.86
USA1YML029W GAS1P22146 559 aaKnown RBP3.43□□□□□ -1.86
USA1YML029W PRE7P23724 241 aaKnown RBP3.43□□□□□ -1.86
USA1YML029W PUB1P32588 453 aaKnown RBP RIP-Chip data3.43□□□□□ -1.86not detected
USA1YML029W CLG1P35190 452 aa3.43□□□□□ -1.86
USA1YML029W DTR1P38125 572 aa3.43□□□□□ -1.86
USA1YML029W THI2P38141 450 aa3.43□□□□□ -1.86
USA1YML029W GPX2P38143 162 aa3.43□□□□□ -1.86
USA1YML029W APD1P38281 316 aa3.43□□□□□ -1.86
USA1YML029W PHO90P39535 881 aa3.43□□□□□ -1.86
USA1YML029W PUG1P40100 303 aa3.43□□□□□ -1.86
USA1YML029W PHB1P40961 287 aa3.43□□□□□ -1.86
USA1YML029W PMT6P42934 759 aa3.43□□□□□ -1.86
USA1YML029W YGL204CP53089 101 aa3.43□□□□□ -1.86
USA1YML029W PAU12P53343 120 aa3.43□□□□□ -1.86
USA1YML029W YMR130WQ04223 302 aa3.43□□□□□ -1.86
USA1YML029W NNT1Q05874 261 aa3.43□□□□□ -1.86
USA1YML029W YDL176WQ12027 708 aa3.43□□□□□ -1.86
USA1YML029W DCP1Q12517 231 aaPredicted RBP3.43□□□□□ -1.86
USA1YML029W RPL11BQ3E757 174 aaPredicted RBP3.43□□□□□ -1.86
USA1YML029W BLM10P43583 2143 aa3.43□□□□□ -1.86
USA1YML029W HEM4P06174 275 aa3.42□□□□□ -1.86
USA1YML029W SPS4P09937 338 aa3.42□□□□□ -1.86
USA1YML029W DSF1P0CX08 502 aa3.42□□□□□ -1.86
USA1YML029W YNR073CP0CX09 502 aa3.42□□□□□ -1.86
USA1YML029W RPL43AP0CX25 92 aaKnown RBP3.42□□□□□ -1.86
USA1YML029W RPL43BP0CX26 92 aa3.42□□□□□ -1.86
USA1YML029W HNM1P19807 563 aa3.42□□□□□ -1.86
USA1YML029W DAL80P26343 269 aa3.42□□□□□ -1.86
USA1YML029W ZUO1P32527 433 aaKnown RBP3.42□□□□□ -1.86
USA1YML029W CCZ1P38273 704 aa3.42□□□□□ -1.86
USA1YML029W SEN34P39707 275 aa3.42□□□□□ -1.86
USA1YML029W NAS2P40555 220 aa3.42□□□□□ -1.86
USA1YML029W YJL218WP40892 196 aaKnown RBP3.42□□□□□ -1.86
USA1YML029W MKC7P53379 596 aa3.42□□□□□ -1.86
USA1YML029W CPR8P53728 308 aa3.42□□□□□ -1.86
USA1YML029W KAP120Q02932 1032 aa3.42□□□□□ -1.86
USA1YML029W HAS1Q03532 505 aaKnown RBP3.42□□□□□ -1.86
USA1YML029W RAF1Q06891 181 aa3.42□□□□□ -1.86
USA1YML029W AIM6Q07716 390 aa3.42□□□□□ -1.86
USA1YML029W RTC5Q12108 567 aaKnown RBP3.42□□□□□ -1.86
USA1YML029W MED2Q12124 431 aa3.42□□□□□ -1.86
USA1YML029W YEL009C-AA0A023PZF2 135 aa3.42□□□□□ -1.86
USA1YML029W KIN28P06242 306 aa3.42□□□□□ -1.86
USA1YML029W MRP1P10662 321 aaKnown RBP3.42□□□□□ -1.86
USA1YML029W MDH2P22133 377 aa3.42□□□□□ -1.86
USA1YML029W ITR1P30605 584 aa3.42□□□□□ -1.86
USA1YML029W DOA4P32571 926 aa3.42□□□□□ -1.86
USA1YML029W SOF1P33750 489 aaKnown RBP3.42□□□□□ -1.86
USA1YML029W SDS22P36047 338 aa3.42□□□□□ -1.86
USA1YML029W SHM2P37291 469 aaKnown RBP3.42□□□□□ -1.86
USA1YML029W SDP1P40479 209 aa3.42□□□□□ -1.86
USA1YML029W GDS1P41913 522 aa3.42□□□□□ -1.86
USA1YML029W VOA1P53262 265 aa3.42□□□□□ -1.86
USA1YML029W SAM50P53969 484 aa3.42□□□□□ -1.86
USA1YML029W HHT1P61830 136 aa3.42□□□□□ -1.86
USA1YML029W RSM23Q01163 450 aa3.42□□□□□ -1.86
USA1YML029W TDA1Q03533 586 aa3.42□□□□□ -1.86
USA1YML029W GPI17Q04080 534 aa3.42□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms