RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR040CYIR040C YLL066W-AP0CY00 160 aa2.98□□□□□ -1.93
YIR040CYIR040C YLL067W-AP0CY01 160 aa2.98□□□□□ -1.93
YIR040CYIR040C RPL3P14126 387 aaKnown RBP2.98□□□□□ -1.93
YIR040CYIR040C AMD1P15274 810 aaKnown RBP2.98□□□□□ -1.93
YIR040CYIR040C CUP2P15315 225 aa2.98□□□□□ -1.93
YIR040CYIR040C ERD1P16151 362 aa2.98□□□□□ -1.93
YIR040CYIR040C GLN3P18494 730 aa2.98□□□□□ -1.93
YIR040CYIR040C YSP3P25036 478 aa2.98□□□□□ -1.93
YIR040CYIR040C RFA3P26755 122 aaKnown RBP2.98□□□□□ -1.93
YIR040CYIR040C YPS1P32329 569 aa2.98□□□□□ -1.93
YIR040CYIR040C FRE1P32791 686 aa2.98□□□□□ -1.93
YIR040CYIR040C UGP1P32861 499 aaKnown RBP2.98□□□□□ -1.93
YIR040CYIR040C TRS65P32893 560 aa2.98□□□□□ -1.93
YIR040CYIR040C PAN3P36102 679 aaPredicted RBP2.98□□□□□ -1.93
YIR040CYIR040C AUR1P36107 401 aaPredicted RBP2.98□□□□□ -1.93
YIR040CYIR040C YPK3P38070 525 aa2.98□□□□□ -1.93
YIR040CYIR040C KTR3P38130 404 aaPredicted RBP2.98□□□□□ -1.93
YIR040CYIR040C IML3P38265 245 aa2.98□□□□□ -1.93
YIR040CYIR040C EHT1P38295 451 aa2.98□□□□□ -1.93
YIR040CYIR040C YHR033WP38690 423 aa2.98□□□□□ -1.93
YIR040CYIR040C VPS52P39904 641 aa2.98□□□□□ -1.93
YIR040CYIR040C COG3P40094 801 aa2.98□□□□□ -1.93
YIR040CYIR040C GLC8P41818 229 aa2.98□□□□□ -1.93
YIR040CYIR040C MEP2P41948 499 aa2.98□□□□□ -1.93
YIR040CYIR040C ERJ5P43613 295 aaPredicted RBP2.98□□□□□ -1.93
YIR040CYIR040C FAR3P46671 204 aa2.98□□□□□ -1.93
YIR040CYIR040C BRR6P53062 197 aa2.98□□□□□ -1.93
YIR040CYIR040C ARO8P53090 500 aaKnown RBP2.98□□□□□ -1.93
YIR040CYIR040C ROG1P53118 685 aa2.98□□□□□ -1.93
YIR040CYIR040C YGL101WP53144 215 aa2.98□□□□□ -1.93
YIR040CYIR040C POP6P53218 158 aa2.98□□□□□ -1.93
YIR040CYIR040C TIM13P53299 105 aa2.98□□□□□ -1.93
YIR040CYIR040C YNL010WP53981 241 aaKnown RBP2.98□□□□□ -1.93
YIR040CYIR040C IDP3P53982 420 aaKnown RBP2.98□□□□□ -1.93
YIR040CYIR040C ACT1P60010 375 aaKnown RBP2.98□□□□□ -1.93
YIR040CYIR040C YPL068CQ02749 293 aa2.98□□□□□ -1.93
YIR040CYIR040C YPL108WQ02872 168 aaPredicted RBP2.98□□□□□ -1.93
YIR040CYIR040C SCS7Q03529 384 aa2.98□□□□□ -1.93
YIR040CYIR040C HPT1Q04178 221 aaKnown RBP2.98□□□□□ -1.93
YIR040CYIR040C COQ11Q05892 277 aa2.98□□□□□ -1.93
YIR040CYIR040C IPK1Q06667 281 aa2.98□□□□□ -1.93
YIR040CYIR040C CRD1Q07560 283 aa2.98□□□□□ -1.93
YIR040CYIR040C ENT4Q07872 247 aa2.98□□□□□ -1.93
YIR040CYIR040C SPC3Q12133 184 aa2.98□□□□□ -1.93
YIR040CYIR040C GEP5Q12393 293 aa2.98□□□□□ -1.93
YIR040CYIR040C YKL183C-AQ3E765 70 aa2.98□□□□□ -1.93
YIR040CYIR040C YPT6Q99260 215 aa2.98□□□□□ -1.93
YIR040CYIR040C BI3Q9ZZW7 517 aa2.98□□□□□ -1.93
YIR040CYIR040C ADH2P00331 348 aaKnown RBP2.97□□□□□ -1.93
YIR040CYIR040C TPI1P00942 248 aaKnown RBP2.97□□□□□ -1.93
YIR040CYIR040C REP2P03872 296 aa2.97□□□□□ -1.93
YIR040CYIR040C GAL80P04387 435 aa2.97□□□□□ -1.93
YIR040CYIR040C ASP3-2P0CX77 362 aa2.97□□□□□ -1.93
YIR040CYIR040C ASP3-3P0CX78 362 aa2.97□□□□□ -1.93
YIR040CYIR040C ASP3-4P0CX79 362 aa2.97□□□□□ -1.93
YIR040CYIR040C YER190C-BP0CX94 160 aa2.97□□□□□ -1.93
YIR040CYIR040C YEL077W-AP0CX95 160 aa2.97□□□□□ -1.93
YIR040CYIR040C YGR296C-BP0CX96 160 aa2.97□□□□□ -1.93
YIR040CYIR040C YPL283W-BP0CX97 160 aa2.97□□□□□ -1.93
YIR040CYIR040C YPR204C-AP0CX98 160 aa2.97□□□□□ -1.93
YIR040CYIR040C ASP3-1P0CZ17 362 aa2.97□□□□□ -1.93
YIR040CYIR040C GCY1P14065 312 aaKnown RBP RIP-Chip data2.97□□□□□ -1.93not detected
YIR040CYIR040C CPR1P14832 162 aaKnown RBP2.97□□□□□ -1.93
YIR040CYIR040C MDM10P18409 493 aa2.97□□□□□ -1.93
YIR040CYIR040C EPT1P22140 391 aa2.97□□□□□ -1.93
YIR040CYIR040C SAT4P25333 603 aaKnown RBP2.97□□□□□ -1.93
YIR040CYIR040C ARO2P28777 376 aaKnown RBP2.97□□□□□ -1.93
YIR040CYIR040C MRPL9P31334 269 aa2.97□□□□□ -1.93
YIR040CYIR040C MSS51P32335 436 aa2.97□□□□□ -1.93
YIR040CYIR040C ARP2P32381 391 aaKnown RBP2.97□□□□□ -1.93
YIR040CYIR040C APE2P32454 952 aaKnown RBP2.97□□□□□ -1.93
YIR040CYIR040C CYS4P32582 507 aaKnown RBP2.97□□□□□ -1.93
YIR040CYIR040C MUD1P32605 298 aaKnown RBP2.97□□□□□ -1.93
YIR040CYIR040C SFC1P33303 322 aa2.97□□□□□ -1.93
YIR040CYIR040C WBP1P33767 430 aaKnown RBP2.97□□□□□ -1.93
YIR040CYIR040C PHD1P36093 366 aa2.97□□□□□ -1.93
YIR040CYIR040C YPC1P38298 316 aa2.97□□□□□ -1.93
YIR040CYIR040C CUE1P38428 203 aa2.97□□□□□ -1.93
YIR040CYIR040C ARP1P38696 384 aa2.97□□□□□ -1.93
YIR040CYIR040C YPT35P38815 214 aaKnown RBP2.97□□□□□ -1.93
YIR040CYIR040C KRE29P40026 464 aa2.97□□□□□ -1.93
YIR040CYIR040C AYR1P40471 297 aa2.97□□□□□ -1.93
YIR040CYIR040C MAF1P41910 395 aa2.97□□□□□ -1.93
YIR040CYIR040C STE24P47154 453 aa2.97□□□□□ -1.93
YIR040CYIR040C TRM9P49957 279 aa2.97□□□□□ -1.93
YIR040CYIR040C UBC12P52491 188 aa2.97□□□□□ -1.93
YIR040CYIR040C YGR079WP53249 370 aa2.97□□□□□ -1.93
YIR040CYIR040C YPR003CP53394 754 aa2.97□□□□□ -1.93
YIR040CYIR040C ARK1P53974 638 aa2.97□□□□□ -1.93
YIR040CYIR040C ELC1Q03071 99 aa2.97□□□□□ -1.93
YIR040CYIR040C TRS23Q03784 219 aa2.97□□□□□ -1.93
YIR040CYIR040C YMR160WQ03823 816 aa2.97□□□□□ -1.93
YIR040CYIR040C YLR179CQ06252 201 aaKnown RBP2.97□□□□□ -1.93
YIR040CYIR040C CNL1Q06333 122 aa2.97□□□□□ -1.93
YIR040CYIR040C TPO3Q06451 622 aa2.97□□□□□ -1.93
YIR040CYIR040C NOC4Q06512 552 aaPredicted RBP2.97□□□□□ -1.93
YIR040CYIR040C AIM6Q07716 390 aa2.97□□□□□ -1.93
YIR040CYIR040C ATG10Q07879 167 aa2.97□□□□□ -1.93
YIR040CYIR040C PLB3Q08108 686 aa2.97□□□□□ -1.93
YIR040CYIR040C OSW1Q08692 278 aa2.97□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms